RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 RABL2AQ9UBK7 228 aaPredicted RBP12.71□□□□□ -0.37
TRIM13-201ENST00000356017 EXTL2Q9UBQ6 330 aa12.71□□□□□ -0.37
TRIM13-201ENST00000356017 RABL2BQ9UNT1 228 aa12.71□□□□□ -0.37
TRIM13-201ENST00000356017 MRPS7Q9Y2R9 242 aaKnown RBP12.71□□□□□ -0.37
TRIM13-201ENST00000356017 A0A087X0M5 115 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 IGHV1-69DA0A0B4J2H0 117 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 A0A1B0GX30 115 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 RNASEK-C17orf49H0YIS7 233 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 F2RL2O00254 374 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 MMP23AO75900 390 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 IGHV1-69P01742 117 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 SRD5A1P18405 259 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 CBX5P45973 191 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 HMGN3Q15651 99 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 BAIAP2L2Q6UXY1 529 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 IL17RELQ6ZVW7 336 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 DIRAS2Q96HU8 199 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 ELF5Q9UKW6 265 aaPredicted RBP12.7□□□□□ -0.38
TRIM13-201ENST00000356017 DSCAML1Q8TD84 2053 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 TRDCB7Z8K6 153 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 SDCBPO00560 298 aaPredicted RBP12.7□□□□□ -0.38
TRIM13-201ENST00000356017 CRLF1O75462 422 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 IGHV4-38-2P0DP08 117 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 NFYBP25208 207 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 PRSS3P35030 304 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 HLA-DRB3P79483 266 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 HTD2P86397 168 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 CNIH2Q6PI25 160 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 Q6ZS49 121 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 ABHD12Q8N2K0 398 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 DTX3Q8N9I9 347 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 OR11H6Q8NGC7 330 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 NUDCD2Q8WVJ2 157 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 CLEC7AQ9BXN2 247 aa12.7□□□□□ -0.38
TRIM13-201ENST00000356017 MS4A7Q9GZW8 240 aaPredicted RBP12.7□□□□□ -0.38
TRIM13-201ENST00000356017 TLN2Q9Y4G6 2542 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 IGHV2-26A0A0B4J1V2 119 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 HLA-DQB1P01920 261 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 COX7A1P24310 79 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 CD34P28906 385 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 DLX1P56177 255 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 Q3ZCU0 254 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 MIDNQ504T8 468 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 STEAP3Q658P3 488 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 HCP5Q6MZN7 132 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 Q6ZPA2 131 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 PDZD9Q8IXQ8 264 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 PNKDQ8N490 385 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 OR1L1Q8NH94 360 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 OCSTAMPQ9BR26 566 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 ST6GALNAC5Q9BVH7 336 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 SUCNR1Q9BXA5 334 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 SCPEP1Q9HB40 452 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 ZNF286AQ9HBT8 521 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 OR2S2Q9NQN1 319 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 GNG12Q9UBI6 72 aa12.69□□□□□ -0.38
TRIM13-201ENST00000356017 ZNF230Q9UIE0 474 aaPredicted RBP12.69□□□□□ -0.38
TRIM13-201ENST00000356017 IGHV3OR16-10A0A075B7F0 116 aa12.68□□□□□ -0.38
TRIM13-201ENST00000356017 TOR1AO14656 332 aa12.68□□□□□ -0.38
TRIM13-201ENST00000356017 SSX5O60225 188 aa12.68□□□□□ -0.38
TRIM13-201ENST00000356017 DIRAS3O95661 229 aa12.68□□□□□ -0.38
TRIM13-201ENST00000356017 TNFSF8P32971 234 aa12.68□□□□□ -0.38
TRIM13-201ENST00000356017 GDNFP39905 211 aa12.68□□□□□ -0.38
TRIM13-201ENST00000356017 PRRX1P54821 245 aa12.68□□□□□ -0.38
TRIM13-201ENST00000356017 LGALS4P56470 323 aa12.68□□□□□ -0.38
TRIM13-201ENST00000356017 LOXL3P58215 753 aa12.68□□□□□ -0.38
TRIM13-201ENST00000356017 PRB3Q04118 309 aaPredicted RBP12.68□□□□□ -0.38
TRIM13-201ENST00000356017 KLRD1Q13241 179 aa12.68□□□□□ -0.38
TRIM13-201ENST00000356017 LTC4SQ16873 150 aa12.68□□□□□ -0.38
TRIM13-201ENST00000356017 C9orf139Q6ZV77 190 aa12.68□□□□□ -0.38
TRIM13-201ENST00000356017 OR4A4PQ8NGN8 299 aa12.68□□□□□ -0.38
TRIM13-201ENST00000356017 OR9G1Q8NH87 305 aa12.68□□□□□ -0.38
TRIM13-201ENST00000356017 ZNF596Q8TC21 504 aa12.68□□□□□ -0.38
TRIM13-201ENST00000356017 IL1F10Q8WWZ1 152 aa12.68□□□□□ -0.38
TRIM13-201ENST00000356017 GFOD1Q9NXC2 390 aa12.68□□□□□ -0.38
TRIM13-201ENST00000356017 JPT1Q9UK76 154 aa12.68□□□□□ -0.38
TRIM13-201ENST00000356017 SVEP1Q4LDE5 3571 aa12.68□□□□□ -0.38
TRIM13-201ENST00000356017 SULT1C2O00338 296 aa12.67□□□□□ -0.38
TRIM13-201ENST00000356017 NPFFO15130 113 aa12.67□□□□□ -0.38
TRIM13-201ENST00000356017 FABP7O15540 132 aa12.67□□□□□ -0.38
TRIM13-201ENST00000356017 RGS11O94810 467 aa12.67□□□□□ -0.38
TRIM13-201ENST00000356017 LPLP06858 475 aa12.67□□□□□ -0.38
TRIM13-201ENST00000356017 FAM157CP0CG43 387 aa12.67□□□□□ -0.38
TRIM13-201ENST00000356017 EPHA1P21709 976 aa12.67□□□□□ -0.38
TRIM13-201ENST00000356017 ZNF626Q68DY1 528 aa12.67□□□□□ -0.38
TRIM13-201ENST00000356017 BRD3OSQ6XYD6 125 aa12.67□□□□□ -0.38
TRIM13-201ENST00000356017 SNX29P2Q8IUI4 249 aa12.67□□□□□ -0.38
TRIM13-201ENST00000356017 UBALD1Q8TB05 177 aa12.67□□□□□ -0.38
TRIM13-201ENST00000356017 CREB3L1Q96BA8 519 aa12.67□□□□□ -0.38
TRIM13-201ENST00000356017 KIAA2026Q5HYC2 2103 aa12.67□□□□□ -0.38
TRIM13-201ENST00000356017 ARG1P05089 322 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 SCTP09683 121 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 PTHLHP12272 177 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 ZBTB25P24278 435 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 MRPS10P82664 201 aaKnown RBP12.66□□□□□ -0.38
TRIM13-201ENST00000356017 PYHIN1Q6K0P9 492 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 HOGA1Q86XE5 327 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 C8orf31Q8N9H6 132 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 BEND2Q8NDZ0 799 aa12.66□□□□□ -0.38
TRIM13-201ENST00000356017 TSC22D3Q99576 134 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms