RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 ELL3Q9HB65 397 aaPredicted RBP5.8□□□□□ -1.48
VPS13A-201ENST00000355766 HES4Q9HCC6 221 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 GPN1Q9HCN4 374 aaPredicted RBP5.8□□□□□ -1.48
VPS13A-201ENST00000355766 PLEKHJ1Q9NW61 149 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 NLKQ9UBE8 527 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 ZDHHC8Q9ULC8 765 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 ST3GAL6Q9Y274 331 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 KCNK7Q9Y2U2 307 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 MALRD1Q5VYJ5 2156 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 PIGBOS1A0A0B4J2F0 54 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 KIR2DS1A0A191URI9 304 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 PLSCR5A0PG75 271 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 IFNL4K9M1U5 179 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 SOCS1O15524 211 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 ANGPTL7O43827 346 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 TIMM8AO60220 97 aaPredicted RBP5.79□□□□□ -1.48
VPS13A-201ENST00000355766 SSX5O60225 188 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 NUDT3O95989 172 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 MT-ND4P03905 459 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 CD3DP04234 171 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 FCER2P06734 321 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 SFTPBP07988 381 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 CD55P08174 381 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 CTXN2P0C2S0 81 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 SPNP16150 400 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 GNB3P16520 340 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 CA6P23280 308 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 CALCRP30988 508 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 KIR2DS4P43632 304 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 SRP9P49458 86 aaKnown RBP5.79□□□□□ -1.48
VPS13A-201ENST00000355766 TAS2R31P59538 309 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 SEC61A1P61619 476 aaKnown RBP5.79□□□□□ -1.48
VPS13A-201ENST00000355766 CD69Q07108 199 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 ZNF154Q13106 437 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 SCGB2A2Q13296 93 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 ARFRP1Q13795 201 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 KIR2DS1Q14954 304 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 OR8G1Q15617 311 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 GRK1Q15835 563 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 CARTPTQ16568 116 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 SMIM21Q3B7S5 101 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 HAGHLQ6PII5 290 aaPredicted RBP5.79□□□□□ -1.48
VPS13A-201ENST00000355766 PEG10Q86TG7 708 aaKnown RBP5.79□□□□□ -1.48
VPS13A-201ENST00000355766 TCTE3Q8IZS6 198 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 FAM58AQ8N1B3 248 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 GAPTQ8N292 157 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 POC1AQ8NBT0 407 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 OR10AD1Q8NGE0 317 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 MRPL24Q96A35 216 aaKnown RBP5.79□□□□□ -1.48
VPS13A-201ENST00000355766 FGF23Q9GZV9 251 aaPredicted RBP5.79□□□□□ -1.48
VPS13A-201ENST00000355766 GHITMQ9H3K2 345 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 BANF2Q9H503 90 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 DECR2Q9NUI1 292 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 SLC23A1Q9UHI7 598 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 GLS2Q9UI32 602 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 TNFRSF18Q9Y5U5 241 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 NBEAL2Q6ZNJ1 2754 aa5.79□□□□□ -1.48
VPS13A-201ENST00000355766 hCG_2014768A0A024R1R8 64 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 A0A0B4J293 547 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 LINC00854A0A1B0GVQ3 168 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 A0A1W2PP11 408 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 A0A1W2PR80 420 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 NPIPB11E5RHQ5 1161 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 M0R1B8 84 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 GEMIN2O14893 280 aaKnown RBP5.78□□□□□ -1.48
VPS13A-201ENST00000355766 OR7C1O76099 320 aaPredicted RBP5.78□□□□□ -1.48
VPS13A-201ENST00000355766 NAPSAO96009 420 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 IFNA6P05013 189 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 CSN2P05814 226 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 TNFSF4P23510 183 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 GABRR1P24046 479 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 LMO1P25800 156 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 IL2RGP31785 369 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 MPV17P39210 176 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 ZNF83P51522 516 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 DVL1P1P54792 670 aaPredicted RBP5.78□□□□□ -1.48
VPS13A-201ENST00000355766 RRAS2P62070 204 aaPredicted RBP5.78□□□□□ -1.48
VPS13A-201ENST00000355766 EFNB3Q15768 340 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 KCNJ8Q15842 424 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 TAF9Q16594 264 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 SPATA46Q5T0L3 261 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 PRR14LQ5THK1 2151 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 SIGIRRQ6IA17 410 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 LPCAT3Q6P1A2 487 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 GLDNQ6ZMI3 551 aaPredicted RBP5.78□□□□□ -1.48
VPS13A-201ENST00000355766 ZNF782Q6ZMW2 699 aaPredicted RBP5.78□□□□□ -1.48
VPS13A-201ENST00000355766 IDO2Q6ZQW0 420 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 OVCH2Q7RTZ1 564 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 RNF144BQ7Z419 303 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 BHLHE23Q8NDY6 225 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 BEST4Q8NFU0 473 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 OR5AP2Q8NGF4 316 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 OR5H2Q8NGV7 314 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 OR4K15Q8NH41 348 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 NUDCD2Q8WVJ2 157 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 CMSS1Q9BQ75 279 aaKnown RBP5.78□□□□□ -1.48
VPS13A-201ENST00000355766 GINS4Q9BRT9 223 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 MMP28Q9H239 520 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 NCOR1P1Q9H4R4 102 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 ZNF286AQ9HBT8 521 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms