RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 IGHV1-3A0A0C4DH29 117 aa13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 ORC5O43913 435 aa13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 ZNF780AO75290 641 aaPredicted RBP13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 CRTAPO75718 401 aaPredicted RBP13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 MNDAP41218 407 aa13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 ZNF816Q0VGE8 651 aaPredicted RBP13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 MADCAM1Q13477 382 aa13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 KPRPQ5T749 579 aaPredicted RBP13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 RNLSQ5VYX0 342 aa13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 TMEM91Q6ZNR0 172 aa13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 C18orf65Q6ZTR6 163 aa13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 THNSL2Q86YJ6 484 aa13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 Q8N6K4 173 aa13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 OR10V1Q8NGI7 309 aa13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 MYDGFQ969H8 173 aa13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 CREB3L1Q96BA8 519 aa13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 NICN1Q9BSH3 213 aa13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 ETAA1Q9NY74 926 aa13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 LINC00527Q9UJ94 153 aa13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 ERGIC3Q9Y282 383 aa13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 MOB4Q9Y3A3 225 aa13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 AMMECR1Q9Y4X0 333 aaPredicted RBP13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 HBZP02008 142 aa13.24□□□□□ -0.29
PDLIM7-201ENST00000355572 VSIG8P0DPA2 414 aa13.24□□□□□ -0.29
PDLIM7-201ENST00000355572 GZMHP20718 246 aa13.24□□□□□ -0.29
PDLIM7-201ENST00000355572 RPS25P62851 125 aaKnown RBP13.24□□□□□ -0.29
PDLIM7-201ENST00000355572 UNC119Q13432 240 aa13.24□□□□□ -0.29
PDLIM7-201ENST00000355572 HES1Q14469 280 aa13.24□□□□□ -0.29
PDLIM7-201ENST00000355572 SPHARQ15513 63 aa13.24□□□□□ -0.29
PDLIM7-201ENST00000355572 CT45A1Q5HYN5 189 aa13.24□□□□□ -0.29
PDLIM7-201ENST00000355572 CCDC144NLQ6NUI1 221 aa13.24□□□□□ -0.29
PDLIM7-201ENST00000355572 CDH26Q8IXH8 852 aa13.24□□□□□ -0.29
PDLIM7-201ENST00000355572 LINC00311Q8N616 119 aa13.24□□□□□ -0.29
PDLIM7-201ENST00000355572 CT45A3Q8NHU0 189 aa13.24□□□□□ -0.29
PDLIM7-201ENST00000355572 MRPL30Q8TCC3 161 aaKnown RBP13.24□□□□□ -0.29
PDLIM7-201ENST00000355572 SULT4A1Q9BR01 284 aa13.24□□□□□ -0.29
PDLIM7-201ENST00000355572 DUSP21Q9H596 190 aa13.24□□□□□ -0.29
PDLIM7-201ENST00000355572 MCRIP1C9JLW8 97 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 PEX14O75381 377 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 MPIG6BO95866 241 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 CD37P11049 281 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 TMEM11P17152 192 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 MYF6P23409 242 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 MAP2K4P45985 399 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 RAB7AP51149 207 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 QRFPP83859 136 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 EBI3Q14213 229 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 GPR176Q14439 515 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 MED22Q15528 200 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 C1orf100Q5SVJ3 147 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 LIPKQ5VXJ0 399 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 SLC16A12Q6ZSM3 486 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 CENPVQ7Z7K6 275 aaPredicted RBP13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 ZNF329Q86UD4 541 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 OR8H3Q8N146 312 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 PRR18Q8N4B5 295 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 OR52L2PQ8NGH6 319 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 OR52M1Q8NGK5 317 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 OR10X1Q8NGY0 326 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 TMEM203Q969S6 136 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 MRPS24Q96EL2 167 aaKnown RBP13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 EAF1Q96JC9 268 aaPredicted RBP13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 MND1Q9BWT6 205 aa13.23□□□□□ -0.29
PDLIM7-201ENST00000355572 CCRL2O00421 344 aa13.22□□□□□ -0.29
PDLIM7-201ENST00000355572 CHATP28329 748 aa13.22□□□□□ -0.29
PDLIM7-201ENST00000355572 HTR2CP28335 458 aa13.22□□□□□ -0.29
PDLIM7-201ENST00000355572 GPR50Q13585 617 aa13.22□□□□□ -0.29
PDLIM7-201ENST00000355572 RBM48Q5RL73 367 aaKnown RBP13.22□□□□□ -0.29
PDLIM7-201ENST00000355572 ETV3LQ6ZN32 361 aa13.22□□□□□ -0.29
PDLIM7-201ENST00000355572 SLC25A48Q6ZT89 311 aaKnown RBP13.22□□□□□ -0.29
PDLIM7-201ENST00000355572 CEACAM19Q7Z692 300 aa13.22□□□□□ -0.29
PDLIM7-201ENST00000355572 MOB3BQ86TA1 216 aa13.22□□□□□ -0.29
PDLIM7-201ENST00000355572 ODF3L1Q8IXM7 274 aa13.22□□□□□ -0.29
PDLIM7-201ENST00000355572 NKAIN3Q8N8D7 197 aa13.22□□□□□ -0.29
PDLIM7-201ENST00000355572 DTX3Q8N9I9 347 aa13.22□□□□□ -0.29
PDLIM7-201ENST00000355572 RTN4IP1Q8WWV3 396 aaPredicted RBP13.22□□□□□ -0.29
PDLIM7-201ENST00000355572 AKR1E2Q96JD6 320 aa13.22□□□□□ -0.29
PDLIM7-201ENST00000355572 UQCC2Q9BRT2 126 aa13.22□□□□□ -0.29
PDLIM7-201ENST00000355572 PLSCR3Q9NRY6 295 aa13.22□□□□□ -0.29
PDLIM7-201ENST00000355572 MBNL3Q9NUK0 354 aaKnown RBP13.22□□□□□ -0.29
PDLIM7-201ENST00000355572 TRAPPC2LQ9UL33 140 aa13.22□□□□□ -0.29
PDLIM7-201ENST00000355572 TCRBV4S1A1TA0A5B7 111 aa13.21□□□□□ -0.29
PDLIM7-201ENST00000355572 PDCD6O75340 191 aa13.21□□□□□ -0.29
PDLIM7-201ENST00000355572 UCHL1P09936 223 aa13.21□□□□□ -0.29
PDLIM7-201ENST00000355572 FAM106CPP0CH98 169 aa13.21□□□□□ -0.29
PDLIM7-201ENST00000355572 FUT3P21217 361 aa13.21□□□□□ -0.29
PDLIM7-201ENST00000355572 ARHGDIBP52566 201 aa13.21□□□□□ -0.29
PDLIM7-201ENST00000355572 EMX1Q04741 257 aaPredicted RBP13.21□□□□□ -0.29
PDLIM7-201ENST00000355572 PLA2G7Q13093 441 aa13.21□□□□□ -0.29
PDLIM7-201ENST00000355572 NKAPLQ5M9Q1 402 aa13.21□□□□□ -0.29
PDLIM7-201ENST00000355572 C6orf201Q7Z4U5 140 aa13.21□□□□□ -0.29
PDLIM7-201ENST00000355572 C8orf31Q8N9H6 132 aa13.21□□□□□ -0.29
PDLIM7-201ENST00000355572 Q8N9W7 124 aa13.21□□□□□ -0.29
PDLIM7-201ENST00000355572 FAAP24Q9BTP7 215 aa13.21□□□□□ -0.29
PDLIM7-201ENST00000355572 ANKRD60Q9BZ19 345 aa13.21□□□□□ -0.29
PDLIM7-201ENST00000355572 VCXQ9H320 206 aa13.21□□□□□ -0.29
PDLIM7-201ENST00000355572 TAF9BQ9HBM6 251 aa13.21□□□□□ -0.29
PDLIM7-201ENST00000355572 FAM90A10PA6NDY2 464 aa13.2□□□□□ -0.3
PDLIM7-201ENST00000355572 FAM90A7PA6NKC0 464 aa13.2□□□□□ -0.3
PDLIM7-201ENST00000355572 TMEM14DPA8MWL7 114 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms