RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 CD3EP07766 207 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 LUMP51884 338 aaPredicted RBP14.37□□□□□ -0.11
VPS13B-201ENST00000355155 SWI5Q1ZZU3 235 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 KRBOX4Q5JUW0 171 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 GGNBP1Q5YKI7 109 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 ACOT7LQ6ZUV0 252 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 TBC1D26Q86UD7 250 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 FAM122AQ96E09 287 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 PLPPR2Q96GM1 343 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 OR1A1Q9P1Q5 309 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 ERRFI1Q9UJM3 462 aaPredicted RBP14.37□□□□□ -0.11
VPS13B-201ENST00000355155 FBXO9Q9UK97 447 aaPredicted RBP14.37□□□□□ -0.11
VPS13B-201ENST00000355155 HCFC1P51610 2035 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 RNF222A6NCQ9 220 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 PGLYRP1O75594 196 aaPredicted RBP14.37□□□□□ -0.11
VPS13B-201ENST00000355155 ZNF788Q6ZQV5 615 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 CORO2AQ92828 525 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 TP53RKQ96S44 253 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 PRR14LQ5THK1 2151 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 C5orf51A6NDU8 294 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 F2RL2O00254 374 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 ZNF205O95201 554 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 IFNA21P01568 189 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 PET100P0DJ07 73 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 SLC25A6P12236 298 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 GZMHP20718 246 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 ADAM5Q6NVV9 412 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 ZNF546Q86UE3 836 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 CMTM1Q8IZ96 169 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 GALMQ96C23 342 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 SEC22AQ96IW7 307 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 CCL28Q9NRJ3 127 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 ZFP57Q9NU63 452 aa14.37□□□□□ -0.11
VPS13B-201ENST00000355155 SVILO95425 2214 aa14.36□□□□□ -0.11
VPS13B-201ENST00000355155 PHLDA2Q53GA4 152 aa14.36□□□□□ -0.11
VPS13B-201ENST00000355155 ZNF680Q8NEM1 530 aa14.36□□□□□ -0.11
VPS13B-201ENST00000355155 MFFQ9GZY8 342 aa14.36□□□□□ -0.11
VPS13B-201ENST00000355155 RDH8Q9NYR8 311 aa14.36□□□□□ -0.11
VPS13B-201ENST00000355155 GAB2Q9UQC2 676 aa14.36□□□□□ -0.11
VPS13B-201ENST00000355155 FXYD6-FXYD2A0A087WZ82 144 aa14.36□□□□□ -0.11
VPS13B-201ENST00000355155 IGHV3-64DA0A0J9YX35 117 aa14.36□□□□□ -0.11
VPS13B-201ENST00000355155 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.36□□□□□ -0.11
VPS13B-201ENST00000355155 P2RX3P56373 397 aa14.36□□□□□ -0.11
VPS13B-201ENST00000355155 AESQ08117 197 aa14.36□□□□□ -0.11
VPS13B-201ENST00000355155 LHFPL5Q8TAF8 219 aa14.36□□□□□ -0.11
VPS13B-201ENST00000355155 THAP6Q8TBB0 222 aa14.36□□□□□ -0.11
VPS13B-201ENST00000355155 GAFA1Q96PS6 74 aa14.36□□□□□ -0.11
VPS13B-201ENST00000355155 EGLN1Q9GZT9 426 aa14.36□□□□□ -0.11
VPS13B-201ENST00000355155 METTL8Q9H825 291 aaKnown RBP14.36□□□□□ -0.11
VPS13B-201ENST00000355155 ATMQ13315 3056 aa14.36□□□□□ -0.11
VPS13B-201ENST00000355155 MPTX1A8MV57 137 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 H0YIZ8 118 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 ARPC5O15511 151 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 HBZP02008 142 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 S100GP29377 79 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 LY6DQ14210 128 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 C4orf17Q53FE4 359 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 ALKBH2Q6NS38 261 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 TCTEX1D1Q8N7M0 179 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 GALNT11Q8NCW6 608 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 SECTM1Q8WVN6 248 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 AQP10Q96PS8 301 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 RAB9BQ9NP90 201 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 RNF115Q9Y4L5 304 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 MAB21L2Q9Y586 359 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 ODAMA1E959 279 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 SIAH2O43255 324 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 F2RP25116 425 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 SELENOHQ8IZQ5 122 aaKnown RBP14.35□□□□□ -0.11
VPS13B-201ENST00000355155 C14orf79Q96F83 325 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 CNTNAP3BQ96NU0 1288 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 CNTNAP3Q9BZ76 1288 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 MS4A5Q9H3V2 200 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 KCNJ16Q9NPI9 418 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 PRR13Q9NZ81 148 aa14.35□□□□□ -0.11
VPS13B-201ENST00000355155 DEFB108AA8MXU0 73 aa14.34□□□□□ -0.11
VPS13B-201ENST00000355155 SIGLEC5O15389 551 aa14.34□□□□□ -0.11
VPS13B-201ENST00000355155 GLIPR1P48060 266 aa14.34□□□□□ -0.11
VPS13B-201ENST00000355155 TLE1Q04724 770 aa14.34□□□□□ -0.11
VPS13B-201ENST00000355155 OR4D5Q8NGN0 318 aa14.34□□□□□ -0.11
VPS13B-201ENST00000355155 OR13A1Q8NGR1 328 aa14.34□□□□□ -0.11
VPS13B-201ENST00000355155 ZNF665Q9H7R5 613 aa14.34□□□□□ -0.11
VPS13B-201ENST00000355155 JPT1Q9UK76 154 aa14.34□□□□□ -0.11
VPS13B-201ENST00000355155 LGALS8O00214 317 aa14.34□□□□□ -0.11
VPS13B-201ENST00000355155 ATXN7O15265 892 aaPredicted RBP14.34□□□□□ -0.11
VPS13B-201ENST00000355155 IFNA7P01567 189 aa14.34□□□□□ -0.11
VPS13B-201ENST00000355155 ZNF672Q499Z4 452 aaPredicted RBP14.34□□□□□ -0.11
VPS13B-201ENST00000355155 SLC51BQ86UW2 128 aa14.34□□□□□ -0.11
VPS13B-201ENST00000355155 ZNF645Q8N7E2 425 aa14.34□□□□□ -0.11
VPS13B-201ENST00000355155 OR1L1Q8NH94 360 aa14.34□□□□□ -0.11
VPS13B-201ENST00000355155 C11orf1Q9H5F2 150 aa14.34□□□□□ -0.11
VPS13B-201ENST00000355155 OR6C3Q9NZP0 311 aa14.34□□□□□ -0.11
VPS13B-201ENST00000355155 PPP1R3CQ9UQK1 317 aa14.34□□□□□ -0.11
VPS13B-201ENST00000355155 AUP1Q9Y679 476 aa14.34□□□□□ -0.11
VPS13B-201ENST00000355155 RAI1Q7Z5J4 1906 aaPredicted RBP14.34□□□□□ -0.11
VPS13B-201ENST00000355155 NKX2-6A6NCS4 301 aa14.33□□□□□ -0.11
VPS13B-201ENST00000355155 LRRC30A6NM36 301 aa14.33□□□□□ -0.11
VPS13B-201ENST00000355155 FAM90A27PA6NNH2 459 aa14.33□□□□□ -0.11
VPS13B-201ENST00000355155 PHF1O43189 567 aaPredicted RBP14.33□□□□□ -0.11
VPS13B-201ENST00000355155 SSTR2P30874 369 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms