RNA–Protein interactions for RNA: ENST00000351842.8

USP4-202, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 1 (best) BASIC

Gene USP4, Length 3,222 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-202ENST00000351842 PPP1CCP36873 323 aaKnown RBP7.64□□□□□ -1.19
USP4-202ENST00000351842 AP2S1P53680 142 aaPredicted RBP7.64□□□□□ -1.19
USP4-202ENST00000351842 RAG2P55895 527 aa7.64□□□□□ -1.19
USP4-202ENST00000351842 ZNF146Q15072 292 aa7.64□□□□□ -1.19
USP4-202ENST00000351842 TATDN3Q17R31 274 aa7.64□□□□□ -1.19
USP4-202ENST00000351842 OR52L2PQ8NGH6 319 aa7.64□□□□□ -1.19
USP4-202ENST00000351842 FYTTD1Q96QD9 318 aaKnown RBP7.64□□□□□ -1.19
USP4-202ENST00000351842 SMR3AQ99954 134 aa7.64□□□□□ -1.19
USP4-202ENST00000351842 TLNRD1Q9H1K6 362 aa7.64□□□□□ -1.19
USP4-202ENST00000351842 OR2S2Q9NQN1 319 aa7.64□□□□□ -1.19
USP4-202ENST00000351842 OR1A1Q9P1Q5 309 aa7.64□□□□□ -1.19
USP4-202ENST00000351842 NUP50Q9UKX7 468 aa7.64□□□□□ -1.19
USP4-202ENST00000351842 KCNS2Q9ULS6 477 aa7.64□□□□□ -1.19
USP4-202ENST00000351842 ALG5Q9Y673 324 aa7.64□□□□□ -1.19
USP4-202ENST00000351842 ODAMA1E959 279 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 ZNF736B4DX44 427 aaPredicted RBP7.63□□□□□ -1.19
USP4-202ENST00000351842 FAM157AC9JC47 383 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 TNFSF12O43508 249 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 MMP23AO75900 390 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 TGFAP01135 160 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 RLN1P04808 185 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 PGAM2P15259 253 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 ZFP36P26651 326 aaKnown RBP7.63□□□□□ -1.19
USP4-202ENST00000351842 RRAS2P62070 204 aaPredicted RBP7.63□□□□□ -1.19
USP4-202ENST00000351842 GNMTQ14749 295 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 MPV17LQ2QL34 196 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 SPIN3Q5JUX0 258 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 LAMTOR1Q6IAA8 161 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 Q6ZPA2 131 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 IL17RELQ6ZVW7 336 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 SAXO1Q8IYX7 474 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 LINC00518Q8N0U6 118 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 UXS1Q8NBZ7 420 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 LHFPL5Q8TAF8 219 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 MRPS24Q96EL2 167 aaKnown RBP7.63□□□□□ -1.19
USP4-202ENST00000351842 CYSRT1A8MQ03 144 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 C22orf46C9J442 243 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 CTDSPLO15194 276 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 ZNF737O75373 536 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 S100A6P06703 90 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 FCGR3AP08637 254 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 RPA2P15927 270 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 ZNF16P17020 682 aaPredicted RBP7.63□□□□□ -1.19
USP4-202ENST00000351842 REG1BP48304 166 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 NPY4RP50391 375 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 PITPNAQ00169 270 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 KLRD1Q13241 179 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 OR2B11Q5JQS5 317 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 ELP2Q6IA86 826 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 PLET1Q6UQ28 207 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 ZNF788Q6ZQV5 615 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 SPICQ8N5J4 248 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 ZNF565Q8N9K5 539 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 PPP1R35Q8TAP8 253 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 ENKURQ8TC29 256 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 ERGIC1Q969X5 290 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 MARC2Q969Z3 335 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 SSBP3Q9BWW4 388 aaPredicted RBP7.63□□□□□ -1.19
USP4-202ENST00000351842 GHITMQ9H3K2 345 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 ZC4H2Q9NQZ6 224 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 KCNIP1Q9NZI2 227 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 TMEM30CPA0ZSE6 113 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 K7N7A8 449 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 NDUFA2O43678 99 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 GSTZ1O43708 216 aaPredicted RBP7.63□□□□□ -1.19
USP4-202ENST00000351842 IGHV2-70P01814 119 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 LPLP06858 475 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 HTR2BP41595 481 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 RNASE10Q5GAN6 216 aaKnown RBP7.63□□□□□ -1.19
USP4-202ENST00000351842 ASCL4Q6XD76 172 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 CDH26Q8IXH8 852 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 PNKDQ8N490 385 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 OR51S1Q8NGJ8 323 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 OR5H2Q8NGV7 314 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 SECTM1Q8WVN6 248 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 MRI1Q9BV20 369 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 TM2D1Q9BX74 207 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 SPACA1Q9HBV2 294 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 HES4Q9HCC6 221 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 TNFRSF19Q9NS68 423 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 IL36GQ9NZH8 169 aa7.63□□□□□ -1.19
USP4-202ENST00000351842 TSPAN4O14817 238 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 SIGLEC5O15389 551 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 RAB3DO95716 219 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 ADH4P08319 380 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 ACAA1P09110 424 aaPredicted RBP7.62□□□□□ -1.19
USP4-202ENST00000351842 GIFP27352 417 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 LINC00205P59089 165 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 WDR25Q64LD2 544 aaPredicted RBP7.62□□□□□ -1.19
USP4-202ENST00000351842 LRRC20Q8TCA0 184 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 Q8TCH9 128 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 SNAPC3Q92966 411 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 NEIL1Q96FI4 390 aaPredicted RBP7.62□□□□□ -1.19
USP4-202ENST00000351842 ZNF222Q9UK12 451 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 AUP1Q9Y679 476 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 TRGV10A0A0A0MS01 117 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 PPIAL4CA0A0B4J2A2 164 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 C12orf77C9JDV5 145 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 MGST3O14880 152 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 NOS1APO75052 506 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms