RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 C20orf204Q6ZNR8 217 aa13.15□□□□□ -0.3
TNFSF13-202ENST00000349228 STX12Q86Y82 276 aa13.15□□□□□ -0.3
TNFSF13-202ENST00000349228 ATP5SQ99766 215 aa13.15□□□□□ -0.3
TNFSF13-202ENST00000349228 MAGT1Q9H0U3 335 aa13.15□□□□□ -0.3
TNFSF13-202ENST00000349228 CBY1Q9Y3M2 126 aa13.15□□□□□ -0.3
TNFSF13-202ENST00000349228 C1orf196B1AJZ1 125 aa13.15□□□□□ -0.3
TNFSF13-202ENST00000349228 M0R296 226 aa13.15□□□□□ -0.3
TNFSF13-202ENST00000349228 C1QL1O75973 258 aa13.15□□□□□ -0.3
TNFSF13-202ENST00000349228 ERVK11-1P61568 191 aa13.15□□□□□ -0.3
TNFSF13-202ENST00000349228 GABRA6Q16445 453 aa13.15□□□□□ -0.3
TNFSF13-202ENST00000349228 C3AR1Q16581 482 aa13.15□□□□□ -0.3
TNFSF13-202ENST00000349228 AWAT1Q58HT5 328 aa13.15□□□□□ -0.3
TNFSF13-202ENST00000349228 ZNF497Q6ZNH5 498 aa13.15□□□□□ -0.3
TNFSF13-202ENST00000349228 C14orf79Q96F83 325 aa13.15□□□□□ -0.3
TNFSF13-202ENST00000349228 ZNF488Q96MN9 340 aa13.15□□□□□ -0.3
TNFSF13-202ENST00000349228 ZDHHC11Q9H8X9 412 aa13.15□□□□□ -0.3
TNFSF13-202ENST00000349228 TAAR3PQ9P1P4 343 aa13.15□□□□□ -0.3
TNFSF13-202ENST00000349228 KIAA1456Q9P272 454 aa13.15□□□□□ -0.3
TNFSF13-202ENST00000349228 SHANK1Q9Y566 2161 aa13.14□□□□□ -0.31
TNFSF13-202ENST00000349228 RBFOX3A6NFN3 312 aa13.14□□□□□ -0.31
TNFSF13-202ENST00000349228 SH2D1BO14796 132 aa13.14□□□□□ -0.31
TNFSF13-202ENST00000349228 LILRA1O75019 489 aa13.14□□□□□ -0.31
TNFSF13-202ENST00000349228 CNOT4O95628 575 aaKnown RBP13.14□□□□□ -0.31
TNFSF13-202ENST00000349228 ZNF14P17017 642 aaPredicted RBP13.14□□□□□ -0.31
TNFSF13-202ENST00000349228 PTAFRP25105 342 aa13.14□□□□□ -0.31
TNFSF13-202ENST00000349228 TLE4Q04727 773 aa13.14□□□□□ -0.31
TNFSF13-202ENST00000349228 ZNF766Q5HY98 468 aa13.14□□□□□ -0.31
TNFSF13-202ENST00000349228 ZNF561Q8N587 486 aa13.14□□□□□ -0.31
TNFSF13-202ENST00000349228 TMEM171Q8WVE6 324 aa13.14□□□□□ -0.31
TNFSF13-202ENST00000349228 GPR146Q96CH1 333 aa13.14□□□□□ -0.31
TNFSF13-202ENST00000349228 RBMXL1Q96E39 390 aaKnown RBP13.14□□□□□ -0.31
TNFSF13-202ENST00000349228 CLCC1Q96S66 551 aa13.14□□□□□ -0.31
TNFSF13-202ENST00000349228 DEFB127Q9H1M4 99 aa13.14□□□□□ -0.31
TNFSF13-202ENST00000349228 CDH20Q9HBT6 801 aa13.14□□□□□ -0.31
TNFSF13-202ENST00000349228 LIPGQ9Y5X9 500 aa13.14□□□□□ -0.31
TNFSF13-202ENST00000349228 WSB1Q9Y6I7 421 aa13.14□□□□□ -0.31
TNFSF13-202ENST00000349228 TMEM210A6NLX4 147 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 M0R036 132 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 IFNA5P01569 189 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 SNRNP70P08621 437 aaKnown RBP13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 OMGP23515 440 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 SULT1A1P50225 295 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 PAX9P55771 341 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 TAS2R30P59541 319 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 UBE2NP61088 152 aaKnown RBP13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 PPP1CBP62140 327 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 ZNF146Q15072 292 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 C21orf62-AS1Q17RA5 79 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 SOHLH1Q5JUK2 328 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 AKR1C8PQ5T2L2 129 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 C5orf24Q7Z6I8 188 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 HIST1H2BAQ96A08 127 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 FBXO7Q9Y3I1 522 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 WIPI2Q9Y4P8 454 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 RNF212BA8MTL3 300 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 TMEM50AO95807 157 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 PPP1CCP36873 323 aaKnown RBP13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 ARG2P78540 354 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 HES3Q5TGS1 186 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 SP5Q6BEB4 398 aaPredicted RBP13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 CLEC2AQ6UVW9 174 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 ODF3L1Q8IXM7 274 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 C17orf78Q8N4C9 275 aa13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 MBNL3Q9NUK0 354 aaKnown RBP13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 LIN7CQ9NUP9 197 aaKnown RBP13.13□□□□□ -0.31
TNFSF13-202ENST00000349228 TRAV1-1A0A0B4J248 108 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 ZNHIT1O43257 154 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 TXNL1O43396 289 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 TNFSF12O43508 249 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 SMPD2O60906 423 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 RHBDL1O75783 438 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 CST7O76096 145 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 PGA5P0DJD9 388 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 TUBG1P23258 451 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 CD82P27701 267 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 PCP4P48539 62 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 ASCL1P50553 236 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 INO80CQ6PI98 192 aaPredicted RBP13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 SPSB3Q6PJ21 355 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 P4HA3Q7Z4N8 544 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 SCCPDHQ8NBX0 429 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 RNASE11Q8TAA1 199 aaKnown RBP13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 TUBG2Q9NRH3 451 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 SPRR3Q9UBC9 169 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 TRAPPC2LQ9UL33 140 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 RNF150Q9ULK6 438 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 KIAA1324LA8MWY0 1029 aaPredicted RBP13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 IQCF6A8MYZ5 107 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 SLC33A1O00400 549 aaPredicted RBP13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 OR2H2O95918 312 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 PSG2P11465 335 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 MAS1LP35410 378 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 DHRS13Q6UX07 377 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 ZBTB34Q8NCN2 500 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 CD300LFQ8TDQ1 290 aa13.12□□□□□ -0.31
TNFSF13-202ENST00000349228 WDR87Q6ZQQ6 2873 aa13.11□□□□□ -0.31
TNFSF13-202ENST00000349228 HSPB1P04792 205 aaKnown RBP13.11□□□□□ -0.31
TNFSF13-202ENST00000349228 OR8U8P0C7N1 319 aa13.11□□□□□ -0.31
TNFSF13-202ENST00000349228 AKR1D1P51857 326 aa13.11□□□□□ -0.31
TNFSF13-202ENST00000349228 TESK1Q15569 626 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 199.4 ms