RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 RELTQ969Z4 430 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 PINX1Q96BK5 328 aaKnown RBP13.63□□□□□ -0.23
HMGA1-202ENST00000347617 BORCS8Q96FH0 119 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 ADGRG7Q96K78 797 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 RBM14Q96PK6 669 aaKnown RBP13.63□□□□□ -0.23
HMGA1-202ENST00000347617 GPR173Q9NS66 373 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 MYO7BQ6PIF6 2116 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 VPS13AQ96RL7 3174 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 OMGP23515 440 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 ASCL1P50553 236 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 DSCR4P56555 118 aaPredicted RBP13.63□□□□□ -0.23
HMGA1-202ENST00000347617 Q0VFX4 171 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 TCF15Q12870 199 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 MPV17LQ2QL34 196 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 SCGB1C1Q8TD33 95 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 SIGLEC12Q96PQ1 595 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 OR5B12Q96R08 314 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 PROK2Q9HC23 129 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 Q9N2K0 584 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 M0QZK8 103 aa13.62□□□□□ -0.23
HMGA1-202ENST00000347617 ADAM20O43506 726 aa13.62□□□□□ -0.23
HMGA1-202ENST00000347617 GGCTO75223 188 aaKnown RBP13.62□□□□□ -0.23
HMGA1-202ENST00000347617 CBR3O75828 277 aa13.62□□□□□ -0.23
HMGA1-202ENST00000347617 TNFSF15O95150 251 aa13.62□□□□□ -0.23
HMGA1-202ENST00000347617 PFN1P07737 140 aaKnown RBP13.62□□□□□ -0.23
HMGA1-202ENST00000347617 CTXN2P0C2S0 81 aa13.62□□□□□ -0.23
HMGA1-202ENST00000347617 ANOS1P23352 680 aa13.62□□□□□ -0.23
HMGA1-202ENST00000347617 S100GP29377 79 aa13.62□□□□□ -0.23
HMGA1-202ENST00000347617 RPS18P62269 152 aaKnown RBP13.62□□□□□ -0.23
HMGA1-202ENST00000347617 PRDX4Q13162 271 aa13.62□□□□□ -0.23
HMGA1-202ENST00000347617 SLC25A24Q6NUK1 477 aa13.62□□□□□ -0.23
HMGA1-202ENST00000347617 CYP2G1PQ6ZSU1 146 aa13.62□□□□□ -0.23
HMGA1-202ENST00000347617 TBC1D26Q86UD7 250 aa13.62□□□□□ -0.23
HMGA1-202ENST00000347617 TMEM170AQ8WVE7 144 aa13.62□□□□□ -0.23
HMGA1-202ENST00000347617 R3HDM4Q96D70 268 aa13.62□□□□□ -0.23
HMGA1-202ENST00000347617 SDK2Q58EX2 2172 aa13.61□□□□□ -0.23
HMGA1-202ENST00000347617 VAMP5O95183 116 aa13.61□□□□□ -0.23
HMGA1-202ENST00000347617 WNT2P09544 360 aa13.61□□□□□ -0.23
HMGA1-202ENST00000347617 METTL15P1P0C7V9 234 aa13.61□□□□□ -0.23
HMGA1-202ENST00000347617 FUT6P51993 359 aa13.61□□□□□ -0.23
HMGA1-202ENST00000347617 ODF3L1Q8IXM7 274 aa13.61□□□□□ -0.23
HMGA1-202ENST00000347617 ZNF845Q96IR2 970 aaPredicted RBP13.61□□□□□ -0.23
HMGA1-202ENST00000347617 MRPS18CQ9Y3D5 142 aaKnown RBP13.61□□□□□ -0.23
HMGA1-202ENST00000347617 WDR87Q6ZQQ6 2873 aa13.61□□□□□ -0.23
HMGA1-202ENST00000347617 NCOA6Q14686 2063 aaPredicted RBP13.61□□□□□ -0.23
HMGA1-202ENST00000347617 XKRY2A2RUG3 117 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 H0Y980 276 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 CST7O76096 145 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 LIFP15018 202 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 NBL1P41271 181 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 CLDN17P56750 224 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 COL10A1Q03692 680 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 RAB35Q15286 201 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 C4orf17Q53FE4 359 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 CXorf66Q5JRM2 361 aaPredicted RBP13.6□□□□□ -0.23
HMGA1-202ENST00000347617 NCR3LG1Q68D85 454 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 TMEM42Q69YG0 159 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 P4HA3Q7Z4N8 544 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 THNSL2Q86YJ6 484 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 PLPPR1Q8TBJ4 325 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 NABP1Q96AH0 204 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 ANAPC16Q96DE5 110 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 OR14J1Q9UGF5 321 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 WASF3Q9UPY6 502 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 FRYLO94915 3013 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 ARID1AO14497 2285 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 LRP5LA4QPB2 252 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 C5orf63A6NC05 138 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 M0R143 59 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 CHST1O43916 411 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 CYTIPO60759 359 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 CCL3P10147 92 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 GNRHRP30968 328 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 RUNX1Q01196 453 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 TNFRSF9Q07011 255 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 TMEM241Q24JQ0 296 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 IGF2-ASQ6U949 168 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 TMEM123Q8N131 208 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 PSMF1Q92530 271 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 HIST1H2AAQ96QV6 131 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 RNF115Q9Y4L5 304 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 RFNGQ9Y644 331 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 KNTC1P50748 2209 aa13.6□□□□□ -0.23
HMGA1-202ENST00000347617 MYO15AQ9UKN7 3530 aa13.59□□□□□ -0.23
HMGA1-202ENST00000347617 TMEM250H0YL14 139 aa13.59□□□□□ -0.23
HMGA1-202ENST00000347617 DHHO43323 396 aa13.59□□□□□ -0.23
HMGA1-202ENST00000347617 SPRY1O43609 319 aaPredicted RBP13.59□□□□□ -0.23
HMGA1-202ENST00000347617 ANGPTL7O43827 346 aa13.59□□□□□ -0.23
HMGA1-202ENST00000347617 P04436 131 aa13.59□□□□□ -0.23
HMGA1-202ENST00000347617 TYMSP04818 313 aa13.59□□□□□ -0.23
HMGA1-202ENST00000347617 EPHA1P21709 976 aa13.59□□□□□ -0.23
HMGA1-202ENST00000347617 SRP14P37108 136 aaKnown RBP13.59□□□□□ -0.23
HMGA1-202ENST00000347617 RBM11P57052 281 aaKnown RBP13.59□□□□□ -0.23
HMGA1-202ENST00000347617 ZNF154Q13106 437 aa13.59□□□□□ -0.23
HMGA1-202ENST00000347617 RSPO1Q2MKA7 263 aaPredicted RBP13.59□□□□□ -0.23
HMGA1-202ENST00000347617 WDR25Q64LD2 544 aaPredicted RBP13.59□□□□□ -0.23
HMGA1-202ENST00000347617 PRSS33Q8NF86 280 aa13.59□□□□□ -0.23
HMGA1-202ENST00000347617 MAGT1Q9H0U3 335 aa13.59□□□□□ -0.23
HMGA1-202ENST00000347617 PLEK2Q9NYT0 353 aa13.59□□□□□ -0.23
HMGA1-202ENST00000347617 ST3GAL6Q9Y274 331 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms