RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 ZNF728P0DKX0 622 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 GZMHP20718 246 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 RFX2P48378 723 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 DLX1P56177 255 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 TAS2R19P59542 299 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 PRAMEF5Q5TYX0 476 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 CD276Q5ZPR3 534 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 STEAP1BQ6NZ63 245 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 OR5AP2Q8NGF4 316 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 OR4C16Q8NGL9 310 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 ZNF714Q96N38 554 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 HRASLSQ9HDD0 168 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 TAS2R3Q9NYW6 316 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 OR1A1Q9P1Q5 309 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 POLR3KQ9Y2Y1 108 aaPredicted RBP15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 IGHV3-43A0A0B4J1X8 118 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 IGHV2-70DA0A0C4DH43 119 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 KIR2DS1A0A191URI9 304 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 ZNF735P0CB33 412 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 IGHV3-43DP0DP04 118 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 KIR2DS4P43632 304 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 ARPC4P59998 168 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 GNMTQ14749 295 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 KIR2DS1Q14954 304 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 CDK10Q15131 360 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 CHRFAM7AQ494W8 412 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 C16orf87Q6PH81 154 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 TRAT1Q6PIZ9 186 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 OR52L2PQ8NGH6 319 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 OR4A4PQ8NGN8 299 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 OR5H2Q8NGV7 314 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 IL1F10Q8WWZ1 152 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 CABLES2Q9BTV7 478 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 LINC00574Q9H8X3 128 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 TAS2R8Q9NYW2 309 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 OPN4Q9UHM6 478 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 ZNF107Q9UII5 783 aaPredicted RBP15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 MGAT4AQ9UM21 535 aa15.61■□□□□ 0.09
CHMP4A-201ENST00000347519 F2RL2O00254 374 aa15.6■□□□□ 0.09
CHMP4A-201ENST00000347519 BET1O15155 118 aa15.6■□□□□ 0.09
CHMP4A-201ENST00000347519 RAB3DO95716 219 aa15.6■□□□□ 0.09
CHMP4A-201ENST00000347519 HEXAP06865 529 aa15.6■□□□□ 0.09
CHMP4A-201ENST00000347519 AKAIN1P0CW23 69 aa15.6■□□□□ 0.09
CHMP4A-201ENST00000347519 INPP1P49441 399 aa15.6■□□□□ 0.09
CHMP4A-201ENST00000347519 ARF6P62330 175 aa15.6■□□□□ 0.09
CHMP4A-201ENST00000347519 PRB3Q04118 309 aaPredicted RBP15.6■□□□□ 0.09
CHMP4A-201ENST00000347519 C11orf91Q3C1V1 193 aa15.6■□□□□ 0.09
CHMP4A-201ENST00000347519 OVCH2Q7RTZ1 564 aa15.6■□□□□ 0.09
CHMP4A-201ENST00000347519 ZNF554Q86TJ5 538 aa15.6■□□□□ 0.09
CHMP4A-201ENST00000347519 Q8N7P7 452 aa15.6■□□□□ 0.09
CHMP4A-201ENST00000347519 OR56B4Q8NH76 319 aa15.6■□□□□ 0.09
CHMP4A-201ENST00000347519 SLC6A7Q99884 636 aa15.6■□□□□ 0.09
CHMP4A-201ENST00000347519 PARP12Q9H0J9 701 aaKnown RBP15.6■□□□□ 0.09
CHMP4A-201ENST00000347519 IDI2-AS1Q9NZ38 188 aa15.6■□□□□ 0.09
CHMP4A-201ENST00000347519 ONECUT1Q9UBC0 465 aa15.6■□□□□ 0.09
CHMP4A-201ENST00000347519 ZNF469Q96JG9 3925 aaPredicted RBP15.59■□□□□ 0.09
CHMP4A-201ENST00000347519 ITPR3Q14573 2671 aa15.59■□□□□ 0.09
CHMP4A-201ENST00000347519 TRBV6-7A0A0A0MS04 114 aa15.59■□□□□ 0.09
CHMP4A-201ENST00000347519 C17orf98A8MV24 154 aa15.59■□□□□ 0.09
CHMP4A-201ENST00000347519 LIPFP07098 398 aa15.59■□□□□ 0.09
CHMP4A-201ENST00000347519 IGHV4-31P0DP07 118 aa15.59■□□□□ 0.09
CHMP4A-201ENST00000347519 LOXL3P58215 753 aa15.59■□□□□ 0.09
CHMP4A-201ENST00000347519 TAS2R46P59540 309 aa15.59■□□□□ 0.09
CHMP4A-201ENST00000347519 DCTN2Q13561 401 aaKnown RBP15.59■□□□□ 0.09
CHMP4A-201ENST00000347519 TMPRSS13Q9BYE2 586 aa15.59■□□□□ 0.09
CHMP4A-201ENST00000347519 C11orf54Q9H0W9 315 aaPredicted RBP15.59■□□□□ 0.09
CHMP4A-201ENST00000347519 EHFQ9NZC4 300 aa15.59■□□□□ 0.09
CHMP4A-201ENST00000347519 FAM172BPA6NC97 362 aa15.58■□□□□ 0.08
CHMP4A-201ENST00000347519 SPINT2O43291 252 aa15.58■□□□□ 0.08
CHMP4A-201ENST00000347519 ENSAO43768 121 aaKnown RBP15.58■□□□□ 0.08
CHMP4A-201ENST00000347519 MSMBP08118 114 aa15.58■□□□□ 0.08
CHMP4A-201ENST00000347519 OR3A3P47888 321 aa15.58■□□□□ 0.08
CHMP4A-201ENST00000347519 DYRK1AQ13627 763 aa15.58■□□□□ 0.08
CHMP4A-201ENST00000347519 TMEM249Q2WGJ8 235 aa15.58■□□□□ 0.08
CHMP4A-201ENST00000347519 RNASE10Q5GAN6 216 aaKnown RBP15.58■□□□□ 0.08
CHMP4A-201ENST00000347519 VAX1Q5SQQ9 334 aa15.58■□□□□ 0.08
CHMP4A-201ENST00000347519 OR10V1Q8NGI7 309 aa15.58■□□□□ 0.08
CHMP4A-201ENST00000347519 LEAP2Q969E1 77 aa15.58■□□□□ 0.08
CHMP4A-201ENST00000347519 GALMQ96C23 342 aa15.58■□□□□ 0.08
CHMP4A-201ENST00000347519 GAL3ST2Q9H3Q3 398 aa15.58■□□□□ 0.08
CHMP4A-201ENST00000347519 NECAP2Q9NVZ3 263 aa15.58■□□□□ 0.08
CHMP4A-201ENST00000347519 SLC23A1Q9UHI7 598 aa15.58■□□□□ 0.08
CHMP4A-201ENST00000347519 CELSR1Q9NYQ6 3014 aa15.57■□□□□ 0.08
CHMP4A-201ENST00000347519 IGHV3-7P01780 117 aa15.57■□□□□ 0.08
CHMP4A-201ENST00000347519 OR5H8P0DN80 308 aa15.57■□□□□ 0.08
CHMP4A-201ENST00000347519 NFYAP23511 347 aaPredicted RBP15.57■□□□□ 0.08
CHMP4A-201ENST00000347519 FPR2P25090 351 aa15.57■□□□□ 0.08
CHMP4A-201ENST00000347519 BTCP35070 178 aa15.57■□□□□ 0.08
CHMP4A-201ENST00000347519 PPP1CCP36873 323 aaKnown RBP15.57■□□□□ 0.08
CHMP4A-201ENST00000347519 DVL1P1P54792 670 aaPredicted RBP15.57■□□□□ 0.08
CHMP4A-201ENST00000347519 AP3S2P59780 193 aa15.57■□□□□ 0.08
CHMP4A-201ENST00000347519 ACTBL2Q562R1 376 aa15.57■□□□□ 0.08
CHMP4A-201ENST00000347519 ZNF660Q6AZW8 331 aaPredicted RBP15.57■□□□□ 0.08
CHMP4A-201ENST00000347519 HEPN1Q6WQI6 88 aa15.57■□□□□ 0.08
CHMP4A-201ENST00000347519 ZNF782Q6ZMW2 699 aaPredicted RBP15.57■□□□□ 0.08
CHMP4A-201ENST00000347519 MSI2Q96DH6 328 aaKnown RBP15.57■□□□□ 0.08
CHMP4A-201ENST00000347519 COX4I2Q96KJ9 171 aa15.57■□□□□ 0.08
CHMP4A-201ENST00000347519 INSIG2Q9Y5U4 225 aa15.57■□□□□ 0.08
CHMP4A-201ENST00000347519 WNK2Q9Y3S1 2297 aa15.56■□□□□ 0.08
CHMP4A-201ENST00000347519 B4DSR2 109 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms