RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 FAAP20Q6NZ36 180 aa13.16□□□□□ -0.3
RAB5C-201ENST00000346213 TCF23Q7RTU1 214 aa13.16□□□□□ -0.3
RAB5C-201ENST00000346213 C11orf42Q8N5U0 333 aa13.16□□□□□ -0.3
RAB5C-201ENST00000346213 PXT1Q8NFP0 134 aa13.16□□□□□ -0.3
RAB5C-201ENST00000346213 OR51T1Q8NGJ9 327 aa13.16□□□□□ -0.3
RAB5C-201ENST00000346213 DNTTIP1Q9H147 329 aa13.16□□□□□ -0.3
RAB5C-201ENST00000346213 GHITMQ9H3K2 345 aa13.16□□□□□ -0.3
RAB5C-201ENST00000346213 PRDM13Q9H4Q3 707 aa13.16□□□□□ -0.3
RAB5C-201ENST00000346213 ZNF221Q9UK13 617 aa13.16□□□□□ -0.3
RAB5C-201ENST00000346213 A0A1W2PRD5 423 aa13.15□□□□□ -0.3
RAB5C-201ENST00000346213 A0A1W2PRF3 423 aa13.15□□□□□ -0.3
RAB5C-201ENST00000346213 A0A1W2PRM7 423 aa13.15□□□□□ -0.3
RAB5C-201ENST00000346213 TMEM89A2RUT3 159 aa13.15□□□□□ -0.3
RAB5C-201ENST00000346213 MFNGO00587 321 aa13.15□□□□□ -0.3
RAB5C-201ENST00000346213 HOXA3O43365 443 aaPredicted RBP13.15□□□□□ -0.3
RAB5C-201ENST00000346213 ZNF780AO75290 641 aaPredicted RBP13.15□□□□□ -0.3
RAB5C-201ENST00000346213 PEX14O75381 377 aa13.15□□□□□ -0.3
RAB5C-201ENST00000346213 FPR2P25090 351 aa13.15□□□□□ -0.3
RAB5C-201ENST00000346213 PAX6P26367 422 aa13.15□□□□□ -0.3
RAB5C-201ENST00000346213 IL24Q13007 206 aa13.15□□□□□ -0.3
RAB5C-201ENST00000346213 ARL6IP1Q15041 203 aa13.15□□□□□ -0.3
RAB5C-201ENST00000346213 ZNF782Q6ZMW2 699 aaPredicted RBP13.15□□□□□ -0.3
RAB5C-201ENST00000346213 ZNF573Q86YE8 665 aa13.15□□□□□ -0.3
RAB5C-201ENST00000346213 TMEM185AQ8NFB2 350 aa13.15□□□□□ -0.3
RAB5C-201ENST00000346213 AJUBAQ96IF1 538 aa13.15□□□□□ -0.3
RAB5C-201ENST00000346213 IL36GQ9NZH8 169 aa13.15□□□□□ -0.3
RAB5C-201ENST00000346213 IGHV1-69DA0A0B4J2H0 117 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 NKX6-3A6NJ46 265 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 SPRY1O43609 319 aaPredicted RBP13.15□□□□□ -0.31
RAB5C-201ENST00000346213 PRAF2O60831 178 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 RAB3DO95716 219 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 IGHV1-69P01742 117 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 NDUFB7P17568 137 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 PRTN3P24158 256 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 PRDX2P32119 198 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 MECP2P51608 486 aaKnown RBP13.15□□□□□ -0.31
RAB5C-201ENST00000346213 BAMBIQ13145 260 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 ZNF273Q14593 569 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 RSU1Q15404 277 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 RBMS2Q15434 407 aaKnown RBP13.15□□□□□ -0.31
RAB5C-201ENST00000346213 METTL11BQ5VVY1 283 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 SLC25A26Q70HW3 274 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 TRAPPC6BQ86SZ2 158 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 OR4D10Q8NGI6 311 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 OR10K1Q8NGX5 313 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 Q96M66 194 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 PKIBQ9C010 78 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 TNFRSF19Q9NS68 423 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 ANAPC10Q9UM13 185 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 KPTNQ9Y664 436 aa13.15□□□□□ -0.31
RAB5C-201ENST00000346213 TMEM82A0PJX8 343 aa13.14□□□□□ -0.31
RAB5C-201ENST00000346213 ZNF736B4DX44 427 aaPredicted RBP13.14□□□□□ -0.31
RAB5C-201ENST00000346213 ANGPTL7O43827 346 aa13.14□□□□□ -0.31
RAB5C-201ENST00000346213 SSX5O60225 188 aa13.14□□□□□ -0.31
RAB5C-201ENST00000346213 ZNF737O75373 536 aa13.14□□□□□ -0.31
RAB5C-201ENST00000346213 CA11O75493 328 aa13.14□□□□□ -0.31
RAB5C-201ENST00000346213 LIPFP07098 398 aa13.14□□□□□ -0.31
RAB5C-201ENST00000346213 GNG2P59768 71 aa13.14□□□□□ -0.31
RAB5C-201ENST00000346213 PDZK1IP1Q13113 114 aa13.14□□□□□ -0.31
RAB5C-201ENST00000346213 LRRC10Q5BKY1 277 aa13.14□□□□□ -0.31
RAB5C-201ENST00000346213 ATAD3CQ5T2N8 411 aa13.14□□□□□ -0.31
RAB5C-201ENST00000346213 ZSCAN4Q8NAM6 433 aaPredicted RBP13.14□□□□□ -0.31
RAB5C-201ENST00000346213 NUDCD2Q8WVJ2 157 aa13.14□□□□□ -0.31
RAB5C-201ENST00000346213 ARHGAP5-AS1Q96IT6 56 aa13.14□□□□□ -0.31
RAB5C-201ENST00000346213 PCDHB16Q9NRJ7 776 aa13.14□□□□□ -0.31
RAB5C-201ENST00000346213 OR14J1Q9UGF5 321 aa13.14□□□□□ -0.31
RAB5C-201ENST00000346213 KCNK7Q9Y2U2 307 aa13.14□□□□□ -0.31
RAB5C-201ENST00000346213 TRIM77I1YAP6 450 aa13.13□□□□□ -0.31
RAB5C-201ENST00000346213 ARPC1BO15143 372 aaKnown RBP13.13□□□□□ -0.31
RAB5C-201ENST00000346213 NXPH2O95156 264 aa13.13□□□□□ -0.31
RAB5C-201ENST00000346213 HTR3BO95264 441 aa13.13□□□□□ -0.31
RAB5C-201ENST00000346213 CSTBP04080 98 aaKnown RBP13.13□□□□□ -0.31
RAB5C-201ENST00000346213 CCL3L1P16619 93 aa13.13□□□□□ -0.31
RAB5C-201ENST00000346213 NAT1P18440 290 aa13.13□□□□□ -0.31
RAB5C-201ENST00000346213 BCL3P20749 454 aa13.13□□□□□ -0.31
RAB5C-201ENST00000346213 DUSP1P28562 367 aa13.13□□□□□ -0.31
RAB5C-201ENST00000346213 BLVRBP30043 206 aaPredicted RBP13.13□□□□□ -0.31
RAB5C-201ENST00000346213 COMPP49747 757 aaPredicted RBP13.13□□□□□ -0.31
RAB5C-201ENST00000346213 RELBQ01201 579 aa13.13□□□□□ -0.31
RAB5C-201ENST00000346213 COL10A1Q03692 680 aa13.13□□□□□ -0.31
RAB5C-201ENST00000346213 MEF2DQ14814 521 aa13.13□□□□□ -0.31
RAB5C-201ENST00000346213 GPR157Q5UAW9 335 aa13.13□□□□□ -0.31
RAB5C-201ENST00000346213 GIMAP1Q8WWP7 306 aa13.13□□□□□ -0.31
RAB5C-201ENST00000346213 MRPS24Q96EL2 167 aaKnown RBP13.13□□□□□ -0.31
RAB5C-201ENST00000346213 MED30Q96HR3 178 aa13.13□□□□□ -0.31
RAB5C-201ENST00000346213 OR51J1Q9H342 316 aa13.13□□□□□ -0.31
RAB5C-201ENST00000346213 RASL12Q9NYN1 266 aa13.13□□□□□ -0.31
RAB5C-201ENST00000346213 FLVCR2Q9UPI3 526 aa13.13□□□□□ -0.31
RAB5C-201ENST00000346213 TRRAPQ9Y4A5 3859 aa13.13□□□□□ -0.31
RAB5C-201ENST00000346213 RGS13O14921 159 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 IL5P05113 134 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 RNASE1P07998 156 aaKnown RBP13.12□□□□□ -0.31
RAB5C-201ENST00000346213 ZNF735P0CB33 412 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 CBX5P45973 191 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 DLX6P56179 175 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 SCGB2A2Q13296 93 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 SMIM21Q3B7S5 101 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 RTN4RL2Q86UN3 420 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 KIR3DL3Q8N743 410 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 OR51S1Q8NGJ8 323 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms