RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 Q6YL49 198 aa16.92■□□□□ 0.3
SMARCB1-202ENST00000344921 LHFPL4Q7Z7J7 247 aa16.92■□□□□ 0.3
SMARCB1-202ENST00000344921 NDNFQ8TB73 568 aa16.92■□□□□ 0.3
SMARCB1-202ENST00000344921 ZNF596Q8TC21 504 aa16.92■□□□□ 0.3
SMARCB1-202ENST00000344921 C17orf50Q8WW18 174 aa16.92■□□□□ 0.3
SMARCB1-202ENST00000344921 LEAP2Q969E1 77 aa16.92■□□□□ 0.3
SMARCB1-202ENST00000344921 C12orf4Q9NQ89 552 aa16.92■□□□□ 0.3
SMARCB1-202ENST00000344921 MBNL3Q9NUK0 354 aaKnown RBP16.92■□□□□ 0.3
SMARCB1-202ENST00000344921 ODF3BA8MYP8 253 aa16.91■□□□□ 0.3
SMARCB1-202ENST00000344921 HOXA3O43365 443 aaPredicted RBP16.91■□□□□ 0.3
SMARCB1-202ENST00000344921 NAPSAO96009 420 aa16.91■□□□□ 0.3
SMARCB1-202ENST00000344921 HBZP02008 142 aa16.91■□□□□ 0.3
SMARCB1-202ENST00000344921 HIST1H1DP16402 221 aaKnown RBP16.91■□□□□ 0.3
SMARCB1-202ENST00000344921 RORCP51449 518 aa16.91■□□□□ 0.3
SMARCB1-202ENST00000344921 RAB2BQ8WUD1 216 aa16.91■□□□□ 0.3
SMARCB1-202ENST00000344921 ESM1Q9NQ30 184 aa16.91■□□□□ 0.3
SMARCB1-202ENST00000344921 TBL2Q9Y4P3 447 aaKnown RBP16.91■□□□□ 0.3
SMARCB1-202ENST00000344921 IGHV3-43A0A0B4J1X8 118 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 SMIM31A0A1B0GVY4 71 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 DNAJC9-AS1A6NH13 148 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 IGHV3-43DP0DP04 118 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 GNG10P50151 68 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 ARFRP1Q13795 201 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 ARL6IP1Q15041 203 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 ZDHHC22Q8N966 263 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 OR9G1Q8NH87 305 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 OR1L1Q8NH94 360 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 PRDM13Q9H4Q3 707 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 KCNK7Q9Y2U2 307 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 A0A087X0M5 115 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 A0A1B0GX30 115 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 TRIM77I1YAP6 450 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 MELTFP08582 738 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 PAX6P26367 422 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 HTR1DP28221 377 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 CD34P28906 385 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 TMBIM6P55061 237 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 CDNFQ49AH0 187 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 UTF1Q5T230 341 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 MOB1BQ7L9L4 216 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 ZNF554Q86TJ5 538 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 SLC25A38Q96DW6 304 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 GNG12Q9UBI6 72 aa16.9■□□□□ 0.3
SMARCB1-202ENST00000344921 SERPINE3A8MV23 424 aa16.89■□□□□ 0.29
SMARCB1-202ENST00000344921 F2RL2O00254 374 aa16.89■□□□□ 0.29
SMARCB1-202ENST00000344921 MFNGO00587 321 aa16.89■□□□□ 0.29
SMARCB1-202ENST00000344921 SSX2Q16385 188 aa16.89■□□□□ 0.29
SMARCB1-202ENST00000344921 FOXB2Q5VYV0 432 aa16.89■□□□□ 0.29
SMARCB1-202ENST00000344921 SAMD12Q8N8I0 201 aa16.89■□□□□ 0.29
SMARCB1-202ENST00000344921 OR52M1Q8NGK5 317 aa16.89■□□□□ 0.29
SMARCB1-202ENST00000344921 SSMEM1Q8WWF3 244 aa16.89■□□□□ 0.29
SMARCB1-202ENST00000344921 GALMQ96C23 342 aa16.89■□□□□ 0.29
SMARCB1-202ENST00000344921 KCTD12Q96CX2 325 aaKnown RBP16.89■□□□□ 0.29
SMARCB1-202ENST00000344921 MALSU1Q96EH3 234 aa16.89■□□□□ 0.29
SMARCB1-202ENST00000344921 OR2S2Q9NQN1 319 aa16.89■□□□□ 0.29
SMARCB1-202ENST00000344921 DIABLOQ9NR28 239 aa16.89■□□□□ 0.29
SMARCB1-202ENST00000344921 ZNRD1Q9P1U0 126 aa16.89■□□□□ 0.29
SMARCB1-202ENST00000344921 COMMD3Q9UBI1 195 aa16.89■□□□□ 0.29
SMARCB1-202ENST00000344921 PSG11Q9UQ72 335 aa16.89■□□□□ 0.29
SMARCB1-202ENST00000344921 HILPDAQ9Y5L2 63 aa16.89■□□□□ 0.29
SMARCB1-202ENST00000344921 TALDO1P37837 337 aa16.88■□□□□ 0.29
SMARCB1-202ENST00000344921 SLC9A3R2Q15599 337 aa16.88■□□□□ 0.29
SMARCB1-202ENST00000344921 MINOS1Q5TGZ0 78 aa16.88■□□□□ 0.29
SMARCB1-202ENST00000344921 C5orf24Q7Z6I8 188 aa16.88■□□□□ 0.29
SMARCB1-202ENST00000344921 BEND2Q8NDZ0 799 aa16.88■□□□□ 0.29
SMARCB1-202ENST00000344921 OR4P4Q8NGL7 312 aa16.88■□□□□ 0.29
SMARCB1-202ENST00000344921 IL1F10Q8WWZ1 152 aa16.88■□□□□ 0.29
SMARCB1-202ENST00000344921 DPAGT1Q9H3H5 408 aa16.88■□□□□ 0.29
SMARCB1-202ENST00000344921 GFOD1Q9NXC2 390 aa16.88■□□□□ 0.29
SMARCB1-202ENST00000344921 MGAT4AQ9UM21 535 aa16.88■□□□□ 0.29
SMARCB1-202ENST00000344921 MINOS1-NBL1R4GNA1 71 aa16.88■□□□□ 0.29
SMARCB1-202ENST00000344921 TRBV6-6A0A0A6YYG2 114 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 BTBD17A6NE02 478 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 CCDC160A6NGH7 325 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 J3QR06 171 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 IGLV1-47P01700 117 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 UBA52P62987 128 aaKnown RBP16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 HLA-DRB5Q30154 266 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 PLA1AQ53H76 456 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 UBE2NLQ5JXB2 153 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 LDLRAD3Q86YD5 345 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 OR10V1Q8NGI7 309 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 CREB3L1Q96BA8 519 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 S100A16Q96FQ6 103 aaKnown RBP16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 AJUBAQ96IF1 538 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 MMP28Q9H239 520 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 DPM3Q9P2X0 92 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 TRAV18A0A075B6X5 111 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 A0A1W2PPE3 182 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 IGHV4-59P01825 116 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 IER3P46695 156 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 LOXL3P58215 753 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 SPCS2Q15005 226 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 HMGN3Q15651 99 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 TMEM30BQ3MIR4 351 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 ZNF880Q6PDB4 577 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 Q6ZPA2 131 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 OR10X1Q8NGY0 326 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 ACOT12Q8WYK0 555 aa16.87■□□□□ 0.29
SMARCB1-202ENST00000344921 SSX3Q99909 188 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms