RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ZNF57Q68EA5 555 aaPredicted RBP11.34□□□□□ -0.59
TPM4-202ENST00000344824 VMO1Q7Z5L0 202 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 ZNF561Q8N587 486 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 TPRX1Q8N7U7 411 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 OR4K15Q8NH41 348 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 PPP1R35Q8TAP8 253 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 GPX8Q8TED1 209 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 CCDC107Q8WV48 283 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 SDSLQ96GA7 329 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 TBX15Q96SF7 602 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 DCTN5Q9BTE1 182 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 CCDC32Q9BV29 185 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 ST6GALNAC5Q9BVH7 336 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 SIRPDQ9H106 197 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 ESM1Q9NQ30 184 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 TRAV39A0A0B4J263 110 aa11.33□□□□□ -0.6
TPM4-202ENST00000344824 MEX3AA1L020 520 aaKnown RBP11.33□□□□□ -0.6
TPM4-202ENST00000344824 DNAJC9-AS1A6NH13 148 aa11.33□□□□□ -0.6
TPM4-202ENST00000344824 SULT1C2O00338 296 aa11.33□□□□□ -0.6
TPM4-202ENST00000344824 ZNF737O75373 536 aa11.33□□□□□ -0.6
TPM4-202ENST00000344824 UPK1BO75841 260 aa11.33□□□□□ -0.6
TPM4-202ENST00000344824 RBBP9O75884 186 aa11.33□□□□□ -0.6
TPM4-202ENST00000344824 TK1P04183 234 aa11.33□□□□□ -0.6
TPM4-202ENST00000344824 GLAP06280 429 aa11.33□□□□□ -0.6
TPM4-202ENST00000344824 MMP9P14780 707 aa11.33□□□□□ -0.6
TPM4-202ENST00000344824 EDDM3BP56851 147 aa11.33□□□□□ -0.6
TPM4-202ENST00000344824 KIAA2026Q5HYC2 2103 aa11.33□□□□□ -0.6
TPM4-202ENST00000344824 KRBOX4Q5JUW0 171 aa11.33□□□□□ -0.6
TPM4-202ENST00000344824 SPATA3Q8NHX4 192 aa11.33□□□□□ -0.6
TPM4-202ENST00000344824 TRIM63Q969Q1 353 aa11.33□□□□□ -0.6
TPM4-202ENST00000344824 ZDHHC16Q969W1 377 aa11.33□□□□□ -0.6
TPM4-202ENST00000344824 ZNF48Q96MX3 618 aaPredicted RBP11.33□□□□□ -0.6
TPM4-202ENST00000344824 SCPEP1Q9HB40 452 aa11.33□□□□□ -0.6
TPM4-202ENST00000344824 C12orf4Q9NQ89 552 aa11.33□□□□□ -0.6
TPM4-202ENST00000344824 TNFRSF19Q9NS68 423 aa11.33□□□□□ -0.6
TPM4-202ENST00000344824 A0A1W2PRD5 423 aa11.32□□□□□ -0.6
TPM4-202ENST00000344824 A0A1W2PRF3 423 aa11.32□□□□□ -0.6
TPM4-202ENST00000344824 A0A1W2PRM7 423 aa11.32□□□□□ -0.6
TPM4-202ENST00000344824 K7N7A8 449 aa11.32□□□□□ -0.6
TPM4-202ENST00000344824 MGST3O14880 152 aa11.32□□□□□ -0.6
TPM4-202ENST00000344824 GPR37O15354 613 aa11.32□□□□□ -0.6
TPM4-202ENST00000344824 ORC5O43913 435 aa11.32□□□□□ -0.6
TPM4-202ENST00000344824 CA11O75493 328 aa11.32□□□□□ -0.6
TPM4-202ENST00000344824 FCGR3AP08637 254 aa11.32□□□□□ -0.6
TPM4-202ENST00000344824 DLX1P56177 255 aa11.32□□□□□ -0.6
TPM4-202ENST00000344824 IFITM3Q01628 133 aa11.32□□□□□ -0.6
TPM4-202ENST00000344824 KLRD1Q13241 179 aa11.32□□□□□ -0.6
TPM4-202ENST00000344824 OR52W1Q6IF63 320 aa11.32□□□□□ -0.6
TPM4-202ENST00000344824 GDPD3Q7L5L3 318 aa11.32□□□□□ -0.6
TPM4-202ENST00000344824 ZDHHC22Q8N966 263 aa11.32□□□□□ -0.6
TPM4-202ENST00000344824 MRPL30Q8TCC3 161 aaKnown RBP11.32□□□□□ -0.6
TPM4-202ENST00000344824 COQ2Q96H96 371 aa11.32□□□□□ -0.6
TPM4-202ENST00000344824 SEBOXQ9HB31 216 aaPredicted RBP11.32□□□□□ -0.6
TPM4-202ENST00000344824 MTFP1Q9UDX5 166 aa11.32□□□□□ -0.6
TPM4-202ENST00000344824 KIF25Q9UIL4 384 aa11.32□□□□□ -0.6
TPM4-202ENST00000344824 MEIKINA0A087WXM9 373 aa11.31□□□□□ -0.6
TPM4-202ENST00000344824 TMEM30CPA0ZSE6 113 aa11.31□□□□□ -0.6
TPM4-202ENST00000344824 RCVRNP35243 200 aa11.31□□□□□ -0.6
TPM4-202ENST00000344824 CBX5P45973 191 aa11.31□□□□□ -0.6
TPM4-202ENST00000344824 GLIPR1P48060 266 aa11.31□□□□□ -0.6
TPM4-202ENST00000344824 ACTBP60709 375 aa11.31□□□□□ -0.6
TPM4-202ENST00000344824 UBA52P62987 128 aaKnown RBP11.31□□□□□ -0.6
TPM4-202ENST00000344824 DCTN2Q13561 401 aaKnown RBP11.31□□□□□ -0.6
TPM4-202ENST00000344824 RSBN1Q5VWQ0 802 aaPredicted RBP11.31□□□□□ -0.6
TPM4-202ENST00000344824 STEAP3Q658P3 488 aa11.31□□□□□ -0.6
TPM4-202ENST00000344824 ZNF497Q6ZNH5 498 aa11.31□□□□□ -0.6
TPM4-202ENST00000344824 Q6ZPA2 131 aa11.31□□□□□ -0.6
TPM4-202ENST00000344824 C5orf24Q7Z6I8 188 aa11.31□□□□□ -0.6
TPM4-202ENST00000344824 TOMM5Q8N4H5 51 aa11.31□□□□□ -0.6
TPM4-202ENST00000344824 OR5D13Q8NGL4 314 aa11.31□□□□□ -0.6
TPM4-202ENST00000344824 TRAPPC2LQ9UL33 140 aa11.31□□□□□ -0.6
TPM4-202ENST00000344824 KPTNQ9Y664 436 aa11.31□□□□□ -0.6
TPM4-202ENST00000344824 CENPVL3A0A0U1RRI6 287 aa11.3□□□□□ -0.6
TPM4-202ENST00000344824 MT-ND4P03905 459 aa11.3□□□□□ -0.6
TPM4-202ENST00000344824 DTYMKP23919 212 aa11.3□□□□□ -0.6
TPM4-202ENST00000344824 HLA-DMAP28067 261 aa11.3□□□□□ -0.6
TPM4-202ENST00000344824 GLP1RP43220 463 aa11.3□□□□□ -0.6
TPM4-202ENST00000344824 KCNJ3P48549 501 aa11.3□□□□□ -0.6
TPM4-202ENST00000344824 DEFB112Q30KQ8 113 aa11.3□□□□□ -0.6
TPM4-202ENST00000344824 C11orf91Q3C1V1 193 aa11.3□□□□□ -0.6
TPM4-202ENST00000344824 SLC35E4Q6ICL7 350 aa11.3□□□□□ -0.6
TPM4-202ENST00000344824 LYSMD2Q8IV50 215 aa11.3□□□□□ -0.6
TPM4-202ENST00000344824 KIR3DL3Q8N743 410 aa11.3□□□□□ -0.6
TPM4-202ENST00000344824 BEST4Q8NFU0 473 aa11.3□□□□□ -0.6
TPM4-202ENST00000344824 UBALD1Q8TB05 177 aa11.3□□□□□ -0.6
TPM4-202ENST00000344824 OCSTAMPQ9BR26 566 aa11.3□□□□□ -0.6
TPM4-202ENST00000344824 C19orf12Q9NSK7 152 aa11.3□□□□□ -0.6
TPM4-202ENST00000344824 RBMX2Q9Y388 322 aaKnown RBP11.3□□□□□ -0.6
TPM4-202ENST00000344824 IGKV1D-8A0A087WSZ0 117 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 IGHV1-69DA0A0B4J2H0 117 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 M0QYG6 137 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 NAPSAO96009 420 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 IGHV1-69P01742 117 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 CSN2P05814 226 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 CSF1P09603 554 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 GSTT2BP0CG30 244 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 RCC1P18754 421 aaPredicted RBP11.29□□□□□ -0.6
TPM4-202ENST00000344824 RPL31P62899 125 aaKnown RBP11.29□□□□□ -0.6
TPM4-202ENST00000344824 FAAP20Q6NZ36 180 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 C12orf54Q6X4T0 127 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms