RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 HSD17B6O14756 317 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 SPINT2O43291 252 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 GPX5O75715 221 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 MT-ND4P03905 459 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 FAM90A15PP0C7V4 464 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 FAM90A13PP0C7W8 464 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 FAM90A14PP0C7W9 464 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 FAM90A24PP0C7X0 464 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 FSTP19883 344 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 IL3RAP26951 378 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 WNT4P56705 351 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 TCTEX1D4Q5JR98 221 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 SYT6Q5T7P8 510 aaPredicted RBP9.85□□□□□ -0.83
SGCA-202ENST00000344627 RAB12Q6IQ22 244 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 ZNF497Q6ZNH5 498 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 OR10V1Q8NGI7 309 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 OR4K15Q8NH41 348 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 CHPT1Q8WUD6 406 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 DERL3Q96Q80 235 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 VCX3BQ9H321 246 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 RAB9BQ9NP90 201 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 GFOD1Q9NXC2 390 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 GNG12Q9UBI6 72 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 LINC00527Q9UJ94 153 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 IGHV1-3A0A0C4DH29 117 aa9.84□□□□□ -0.83
SGCA-202ENST00000344627 UBE2QL1A1L167 161 aa9.84□□□□□ -0.83
SGCA-202ENST00000344627 NUDT19A8MXV4 375 aa9.84□□□□□ -0.83
SGCA-202ENST00000344627 PTGES3LE9PB15 166 aa9.84□□□□□ -0.83
SGCA-202ENST00000344627 C15orf65H3BRN8 121 aa9.84□□□□□ -0.83
SGCA-202ENST00000344627 FGF16O43320 207 aa9.84□□□□□ -0.83
SGCA-202ENST00000344627 ORC5O43913 435 aa9.84□□□□□ -0.83
SGCA-202ENST00000344627 MPIG6BO95866 241 aa9.84□□□□□ -0.83
SGCA-202ENST00000344627 VHLP40337 213 aa9.84□□□□□ -0.83
SGCA-202ENST00000344627 DOC2BQ14184 412 aa9.84□□□□□ -0.83
SGCA-202ENST00000344627 C6orf183Q5T699 404 aa9.84□□□□□ -0.83
SGCA-202ENST00000344627 OGFRL1Q5TC84 451 aaPredicted RBP9.84□□□□□ -0.83
SGCA-202ENST00000344627 FAM53AQ6NSI3 398 aaPredicted RBP9.84□□□□□ -0.83
SGCA-202ENST00000344627 UNQ9370/PRO34162Q6UXP9 181 aa9.84□□□□□ -0.83
SGCA-202ENST00000344627 C5orf56Q8N8D9 126 aa9.84□□□□□ -0.83
SGCA-202ENST00000344627 ZNF485Q8NCK3 441 aa9.84□□□□□ -0.83
SGCA-202ENST00000344627 OR52M1Q8NGK5 317 aa9.84□□□□□ -0.83
SGCA-202ENST00000344627 FAM46BQ96A09 425 aa9.84□□□□□ -0.83
SGCA-202ENST00000344627 MRPS24Q96EL2 167 aaKnown RBP9.84□□□□□ -0.83
SGCA-202ENST00000344627 NOL4LQ96MY1 436 aaPredicted RBP9.84□□□□□ -0.83
SGCA-202ENST00000344627 GON7Q9BXV9 100 aa9.84□□□□□ -0.83
SGCA-202ENST00000344627 HBZP02008 142 aa9.83□□□□□ -0.84
SGCA-202ENST00000344627 MGMTP16455 207 aa9.83□□□□□ -0.84
SGCA-202ENST00000344627 MAPK3P27361 379 aaPredicted RBP9.83□□□□□ -0.84
SGCA-202ENST00000344627 SLC35B1P78383 322 aa9.83□□□□□ -0.84
SGCA-202ENST00000344627 ZNF816Q0VGE8 651 aaPredicted RBP9.83□□□□□ -0.84
SGCA-202ENST00000344627 ACSM3Q53FZ2 586 aa9.83□□□□□ -0.84
SGCA-202ENST00000344627 LAIR2Q6ISS4 152 aa9.83□□□□□ -0.84
SGCA-202ENST00000344627 SLC35E3Q7Z769 313 aa9.83□□□□□ -0.84
SGCA-202ENST00000344627 FOXRED2Q8IWF2 684 aa9.83□□□□□ -0.84
SGCA-202ENST00000344627 CDH26Q8IXH8 852 aa9.83□□□□□ -0.84
SGCA-202ENST00000344627 NANOGP1Q8N7R0 232 aa9.83□□□□□ -0.84
SGCA-202ENST00000344627 OR2T10Q8NGZ9 312 aa9.83□□□□□ -0.84
SGCA-202ENST00000344627 THRSPQ92748 146 aa9.83□□□□□ -0.84
SGCA-202ENST00000344627 TFAP2CQ92754 450 aa9.83□□□□□ -0.84
SGCA-202ENST00000344627 EAF1Q96JC9 268 aaPredicted RBP9.83□□□□□ -0.84
SGCA-202ENST00000344627 TMED9Q9BVK6 235 aa9.83□□□□□ -0.84
SGCA-202ENST00000344627 PLCXD1Q9NUJ7 323 aa9.83□□□□□ -0.84
SGCA-202ENST00000344627 KCNIP1Q9NZI2 227 aa9.83□□□□□ -0.84
SGCA-202ENST00000344627 C12orf77C9JDV5 145 aa9.82□□□□□ -0.84
SGCA-202ENST00000344627 K7EIL1 84 aa9.82□□□□□ -0.84
SGCA-202ENST00000344627 RAMP3O60896 148 aa9.82□□□□□ -0.84
SGCA-202ENST00000344627 NHLRC4P0CG21 123 aaPredicted RBP9.82□□□□□ -0.84
SGCA-202ENST00000344627 RCC1P18754 421 aaPredicted RBP9.82□□□□□ -0.84
SGCA-202ENST00000344627 FUT3P21217 361 aa9.82□□□□□ -0.84
SGCA-202ENST00000344627 MYCNOSP40205 109 aa9.82□□□□□ -0.84
SGCA-202ENST00000344627 GPR50Q13585 617 aa9.82□□□□□ -0.84
SGCA-202ENST00000344627 NKAPLQ5M9Q1 402 aa9.82□□□□□ -0.84
SGCA-202ENST00000344627 TRAT1Q6PIZ9 186 aa9.82□□□□□ -0.84
SGCA-202ENST00000344627 LINC00311Q8N616 119 aa9.82□□□□□ -0.84
SGCA-202ENST00000344627 NKAIN3Q8N8D7 197 aa9.82□□□□□ -0.84
SGCA-202ENST00000344627 LINC00482Q8N8I6 264 aa9.82□□□□□ -0.84
SGCA-202ENST00000344627 TMEM104Q8NE00 496 aa9.82□□□□□ -0.84
SGCA-202ENST00000344627 OR1L1Q8NH94 360 aa9.82□□□□□ -0.84
SGCA-202ENST00000344627 RTN4IP1Q8WWV3 396 aaPredicted RBP9.82□□□□□ -0.84
SGCA-202ENST00000344627 B9D2Q9BPU9 175 aa9.82□□□□□ -0.84
SGCA-202ENST00000344627 UQCC2Q9BRT2 126 aa9.82□□□□□ -0.84
SGCA-202ENST00000344627 MND1Q9BWT6 205 aa9.82□□□□□ -0.84
SGCA-202ENST00000344627 SCN3BQ9NY72 215 aa9.82□□□□□ -0.84
SGCA-202ENST00000344627 CASQ2O14958 399 aaPredicted RBP9.81□□□□□ -0.84
SGCA-202ENST00000344627 SLC31A2O15432 143 aa9.81□□□□□ -0.84
SGCA-202ENST00000344627 PDCD6O75340 191 aa9.81□□□□□ -0.84
SGCA-202ENST00000344627 CD1AP06126 327 aa9.81□□□□□ -0.84
SGCA-202ENST00000344627 CDK1P06493 297 aa9.81□□□□□ -0.84
SGCA-202ENST00000344627 CD69Q07108 199 aa9.81□□□□□ -0.84
SGCA-202ENST00000344627 INSL4Q14641 139 aa9.81□□□□□ -0.84
SGCA-202ENST00000344627 DEFB121Q5J5C9 76 aa9.81□□□□□ -0.84
SGCA-202ENST00000344627 RBM48Q5RL73 367 aaKnown RBP9.81□□□□□ -0.84
SGCA-202ENST00000344627 FAM27D1Q5T7N8 215 aa9.81□□□□□ -0.84
SGCA-202ENST00000344627 TGIF2LXQ8IUE1 241 aa9.81□□□□□ -0.84
SGCA-202ENST00000344627 MS4A15Q8N5U1 240 aa9.81□□□□□ -0.84
SGCA-202ENST00000344627 FBLIM1Q8WUP2 373 aa9.81□□□□□ -0.84
SGCA-202ENST00000344627 Q96M66 194 aa9.81□□□□□ -0.84
SGCA-202ENST00000344627 WWC2-AS2Q96NR7 200 aa9.81□□□□□ -0.84
SGCA-202ENST00000344627 NEDD4LQ96PU5 975 aa9.81□□□□□ -0.84
SGCA-202ENST00000344627 RASL11BQ9BPW5 248 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms