RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 LINC00322Q6ZN03 302 aaPredicted RBP12.48□□□□□ -0.41
NECTIN1-202ENST00000340882 SUMF2Q8NBJ7 301 aa12.48□□□□□ -0.41
NECTIN1-202ENST00000340882 OR10H4Q8NGA5 316 aa12.48□□□□□ -0.41
NECTIN1-202ENST00000340882 CT45A3Q8NHU0 189 aa12.48□□□□□ -0.41
NECTIN1-202ENST00000340882 CCDC107Q8WV48 283 aa12.48□□□□□ -0.41
NECTIN1-202ENST00000340882 DPCDQ9BVM2 203 aaPredicted RBP12.48□□□□□ -0.41
NECTIN1-202ENST00000340882 TUBA4BQ9H853 241 aa12.48□□□□□ -0.41
NECTIN1-202ENST00000340882 CHCHD3Q9NX63 227 aaKnown RBP12.48□□□□□ -0.41
NECTIN1-202ENST00000340882 SLC25A17O43808 307 aa12.47□□□□□ -0.41
NECTIN1-202ENST00000340882 MITFO75030 526 aaPredicted RBP12.47□□□□□ -0.41
NECTIN1-202ENST00000340882 ISG15P05161 165 aa12.47□□□□□ -0.41
NECTIN1-202ENST00000340882 DBTP11182 482 aaKnown RBP12.47□□□□□ -0.41
NECTIN1-202ENST00000340882 GZMHP20718 246 aa12.47□□□□□ -0.41
NECTIN1-202ENST00000340882 ACTBP60709 375 aa12.47□□□□□ -0.41
NECTIN1-202ENST00000340882 RNLSQ5VYX0 342 aa12.47□□□□□ -0.41
NECTIN1-202ENST00000340882 IL34Q6ZMJ4 242 aa12.47□□□□□ -0.41
NECTIN1-202ENST00000340882 RPP25LQ8N5L8 163 aaKnown RBP12.47□□□□□ -0.41
NECTIN1-202ENST00000340882 ELOVL1Q9BW60 279 aa12.47□□□□□ -0.41
NECTIN1-202ENST00000340882 FAM107BQ9H098 131 aa12.47□□□□□ -0.41
NECTIN1-202ENST00000340882 IZUMO1RA6ND01 250 aa12.46□□□□□ -0.41
NECTIN1-202ENST00000340882 EGR2P11161 476 aaPredicted RBP12.46□□□□□ -0.41
NECTIN1-202ENST00000340882 IL13RA2Q14627 380 aa12.46□□□□□ -0.41
NECTIN1-202ENST00000340882 LRRC36Q1X8D7 754 aa12.46□□□□□ -0.41
NECTIN1-202ENST00000340882 C5orf64Q2M2E5 130 aa12.46□□□□□ -0.41
NECTIN1-202ENST00000340882 ZNF691Q5VV52 312 aa12.46□□□□□ -0.41
NECTIN1-202ENST00000340882 LPCAT4Q643R3 524 aa12.46□□□□□ -0.41
NECTIN1-202ENST00000340882 C12orf73Q69YU5 71 aa12.46□□□□□ -0.41
NECTIN1-202ENST00000340882 OR13C3Q8NGS6 347 aa12.46□□□□□ -0.41
NECTIN1-202ENST00000340882 FLYWCH2Q96CP2 140 aaKnown RBP12.46□□□□□ -0.41
NECTIN1-202ENST00000340882 MS4A10Q96PG2 267 aa12.46□□□□□ -0.41
NECTIN1-202ENST00000340882 NDE1Q9NXR1 346 aa12.46□□□□□ -0.41
NECTIN1-202ENST00000340882 A3GALT2U3KPV4 340 aa12.46□□□□□ -0.41
NECTIN1-202ENST00000340882 TXNL1O43396 289 aa12.45□□□□□ -0.42
NECTIN1-202ENST00000340882 SNX3O60493 162 aa12.45□□□□□ -0.42
NECTIN1-202ENST00000340882 RGS11O94810 467 aa12.45□□□□□ -0.42
NECTIN1-202ENST00000340882 SNRPBP14678 240 aaKnown RBP12.45□□□□□ -0.42
NECTIN1-202ENST00000340882 FSTP19883 344 aa12.45□□□□□ -0.42
NECTIN1-202ENST00000340882 KCNJ3P48549 501 aa12.45□□□□□ -0.42
NECTIN1-202ENST00000340882 LIN54Q6MZP7 749 aa12.45□□□□□ -0.42
NECTIN1-202ENST00000340882 FAHD1Q6P587 224 aa12.45□□□□□ -0.42
NECTIN1-202ENST00000340882 GID4Q8IVV7 300 aa12.45□□□□□ -0.42
NECTIN1-202ENST00000340882 OR10V1Q8NGI7 309 aa12.45□□□□□ -0.42
NECTIN1-202ENST00000340882 RHOVQ96L33 236 aa12.45□□□□□ -0.42
NECTIN1-202ENST00000340882 WARS2Q9UGM6 360 aaKnown RBP12.45□□□□□ -0.42
NECTIN1-202ENST00000340882 FOXA2Q9Y261 457 aaPredicted RBP12.45□□□□□ -0.42
NECTIN1-202ENST00000340882 CEPT1Q9Y6K0 416 aa12.45□□□□□ -0.42
NECTIN1-202ENST00000340882 TMEM30CPA0ZSE6 113 aa12.44□□□□□ -0.42
NECTIN1-202ENST00000340882 ZAR1LA6NP61 321 aa12.44□□□□□ -0.42
NECTIN1-202ENST00000340882 NBR2O15453 112 aa12.44□□□□□ -0.42
NECTIN1-202ENST00000340882 CRIP2P52943 208 aaPredicted RBP12.44□□□□□ -0.42
NECTIN1-202ENST00000340882 SATL1Q86VE3 508 aa12.44□□□□□ -0.42
NECTIN1-202ENST00000340882 PXT1Q8NFP0 134 aa12.44□□□□□ -0.42
NECTIN1-202ENST00000340882 CCDC124Q96CT7 223 aaKnown RBP12.44□□□□□ -0.42
NECTIN1-202ENST00000340882 PLEKHA3Q9HB20 300 aa12.44□□□□□ -0.42
NECTIN1-202ENST00000340882 ADAM30Q9UKF2 790 aa12.44□□□□□ -0.42
NECTIN1-202ENST00000340882 NUBP2Q9Y5Y2 271 aa12.44□□□□□ -0.42
NECTIN1-202ENST00000340882 VPS13DQ5THJ4 4388 aa12.43□□□□□ -0.42
NECTIN1-202ENST00000340882 B2RBV5 119 aa12.43□□□□□ -0.42
NECTIN1-202ENST00000340882 GABRPO00591 440 aa12.43□□□□□ -0.42
NECTIN1-202ENST00000340882 FCN1O00602 326 aa12.43□□□□□ -0.42
NECTIN1-202ENST00000340882 LANCL1O43813 399 aa12.43□□□□□ -0.42
NECTIN1-202ENST00000340882 ORC5O43913 435 aa12.43□□□□□ -0.42
NECTIN1-202ENST00000340882 RAB40BQ12829 278 aa12.43□□□□□ -0.42
NECTIN1-202ENST00000340882 FDX2Q6P4F2 183 aa12.43□□□□□ -0.42
NECTIN1-202ENST00000340882 FAM220AQ7Z4H9 259 aa12.43□□□□□ -0.42
NECTIN1-202ENST00000340882 C5orf24Q7Z6I8 188 aa12.43□□□□□ -0.42
NECTIN1-202ENST00000340882 ODF3L1Q8IXM7 274 aa12.43□□□□□ -0.42
NECTIN1-202ENST00000340882 LRGUKQ96M69 825 aa12.43□□□□□ -0.42
NECTIN1-202ENST00000340882 ZNF251Q9BRH9 671 aa12.43□□□□□ -0.42
NECTIN1-202ENST00000340882 MRPL20Q9BYC9 149 aaKnown RBP12.43□□□□□ -0.42
NECTIN1-202ENST00000340882 GAB2Q9UQC2 676 aa12.43□□□□□ -0.42
NECTIN1-202ENST00000340882 OR4C45A6NMZ5 311 aa12.42□□□□□ -0.42
NECTIN1-202ENST00000340882 SULT1B1O43704 296 aa12.42□□□□□ -0.42
NECTIN1-202ENST00000340882 NDUFA3O95167 84 aa12.42□□□□□ -0.42
NECTIN1-202ENST00000340882 HTR3BO95264 441 aa12.42□□□□□ -0.42
NECTIN1-202ENST00000340882 MT-ND4P03905 459 aa12.42□□□□□ -0.42
NECTIN1-202ENST00000340882 CX3CL1P78423 397 aa12.42□□□□□ -0.42
NECTIN1-202ENST00000340882 Q3ZCU0 254 aa12.42□□□□□ -0.42
NECTIN1-202ENST00000340882 NPBQ8NG41 125 aa12.42□□□□□ -0.42
NECTIN1-202ENST00000340882 OR1L1Q8NH94 360 aa12.42□□□□□ -0.42
NECTIN1-202ENST00000340882 TNFAIP8L1Q8WVP5 186 aa12.42□□□□□ -0.42
NECTIN1-202ENST00000340882 ASB9Q96DX5 294 aa12.42□□□□□ -0.42
NECTIN1-202ENST00000340882 CYYR1Q96J86 154 aa12.42□□□□□ -0.42
NECTIN1-202ENST00000340882 FAM103A1Q9BTL3 118 aaKnown RBP12.42□□□□□ -0.42
NECTIN1-202ENST00000340882 ST6GALNAC5Q9BVH7 336 aa12.42□□□□□ -0.42
NECTIN1-202ENST00000340882 PRRG3Q9BZD7 231 aa12.42□□□□□ -0.42
NECTIN1-202ENST00000340882 H0Y980 276 aa12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 GEMIN2O14893 280 aaKnown RBP12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 OR7C1O76099 320 aaPredicted RBP12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 CDRT1O95170 752 aa12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 TPPP2P59282 170 aa12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 ADARB1P78563 741 aaKnown RBP12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 KLF5Q13887 457 aaPredicted RBP12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 ASCL4Q6XD76 172 aa12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 ZNF497Q6ZNH5 498 aa12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 GTSCR1Q86UQ5 136 aa12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 ARHGAP24Q8N264 748 aa12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 OR51A2Q8NGJ7 313 aa12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 DNAJC9Q8WXX5 260 aa12.41□□□□□ -0.42
NECTIN1-202ENST00000340882 WFDC10AQ9H1F0 79 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms