RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 RCL1Q9Y2P8 373 aaKnown RBP10.96□□□□□ -0.65
LIN54-201ENST00000340417 GBF1Q92538 1859 aa10.96□□□□□ -0.65
LIN54-201ENST00000340417 TRAV8-7A0A075B6U6 113 aa10.96□□□□□ -0.65
LIN54-201ENST00000340417 S100A2P29034 98 aa10.96□□□□□ -0.65
LIN54-201ENST00000340417 SMIM4Q8WVI0 70 aa10.96□□□□□ -0.65
LIN54-201ENST00000340417 INTS1Q8N201 2190 aaKnown RBP10.96□□□□□ -0.66
LIN54-201ENST00000340417 I3L521 148 aa10.96□□□□□ -0.66
LIN54-201ENST00000340417 PHYHD1Q5SRE7 291 aa10.96□□□□□ -0.66
LIN54-201ENST00000340417 GVQW1Q8N7I0 195 aa10.96□□□□□ -0.66
LIN54-201ENST00000340417 PXT1Q8NFP0 134 aa10.96□□□□□ -0.66
LIN54-201ENST00000340417 OR1L8Q8NGR8 309 aa10.96□□□□□ -0.66
LIN54-201ENST00000340417 FAM206AQ9NX38 181 aa10.96□□□□□ -0.66
LIN54-201ENST00000340417 NOTCH4Q99466 2003 aa10.96□□□□□ -0.66
LIN54-201ENST00000340417 A6NNC1 897 aa10.96□□□□□ -0.66
LIN54-201ENST00000340417 SLC25A16P16260 332 aa10.96□□□□□ -0.66
LIN54-201ENST00000340417 FNDC7Q5VTL7 733 aa10.96□□□□□ -0.66
LIN54-201ENST00000340417 KCNIP4Q6PIL6 250 aa10.96□□□□□ -0.66
LIN54-201ENST00000340417 RFLNBQ8N5W9 214 aa10.96□□□□□ -0.66
LIN54-201ENST00000340417 BVESQ8NE79 360 aa10.96□□□□□ -0.66
LIN54-201ENST00000340417 Q8WTZ3 238 aa10.96□□□□□ -0.66
LIN54-201ENST00000340417 DHRS7CA6NNS2 312 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 E5RGE8 158 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 WNT9BO14905 357 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 PRSS23O95084 383 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 ONECUT2O95948 504 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 VSIG8P0DPA2 414 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 CHATP28329 748 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 PSMB3P49720 205 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 UBA52P62987 128 aaKnown RBP10.95□□□□□ -0.66
LIN54-201ENST00000340417 ZBTB34Q8NCN2 500 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 MALSU1Q96EH3 234 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 HRH4Q9H3N8 390 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 CLCF1Q9UBD9 225 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 NSG2Q9Y328 171 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 CRYBB2P43320 205 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 P2RX3P56373 397 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 HOXA4Q00056 320 aaPredicted RBP10.95□□□□□ -0.66
LIN54-201ENST00000340417 TBC1D26Q86UD7 250 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 TMEM123Q8N131 208 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 C2orf50Q96LR7 162 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 SLC25A22Q9H936 323 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 CCDC88CQ9P219 2028 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 DOCK4Q8N1I0 1966 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 CD200P41217 278 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 NANOS3P60323 173 aaKnown RBP10.95□□□□□ -0.66
LIN54-201ENST00000340417 OR2F1Q13607 317 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 C1QTNF12Q5T7M4 302 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 C17orf50Q8WW18 174 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 CCL28Q9NRJ3 127 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 CLEC5AQ9NY25 188 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 PTGDSP41222 190 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 MMP15P51511 669 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 OR2B8PP59922 312 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 ZNF672Q499Z4 452 aaPredicted RBP10.95□□□□□ -0.66
LIN54-201ENST00000340417 BPIFCQ8NFQ6 507 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 OR2T10Q8NGZ9 312 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 TLNRD1Q9H1K6 362 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 SNRNP70P08621 437 aaKnown RBP10.95□□□□□ -0.66
LIN54-201ENST00000340417 SRD5A1P18405 259 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 FLI1Q01543 452 aaPredicted RBP10.95□□□□□ -0.66
LIN54-201ENST00000340417 HABP2Q14520 560 aaPredicted RBP10.95□□□□□ -0.66
LIN54-201ENST00000340417 XAF1Q6GPH4 301 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 ETV3LQ6ZN32 361 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 ACOT7LQ6ZUV0 252 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 FAM216BQ8N7L0 139 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 NAA60Q9H7X0 242 aa10.95□□□□□ -0.66
LIN54-201ENST00000340417 GAPTQ8N292 157 aa10.94□□□□□ -0.66
LIN54-201ENST00000340417 NPFFR1Q9GZQ6 430 aa10.94□□□□□ -0.66
LIN54-201ENST00000340417 IGKV3D-15A0A087WSY6 115 aa10.94□□□□□ -0.66
LIN54-201ENST00000340417 IQCF6A8MYZ5 107 aa10.94□□□□□ -0.66
LIN54-201ENST00000340417 B4DSR2 109 aa10.94□□□□□ -0.66
LIN54-201ENST00000340417 CHST1O43916 411 aa10.94□□□□□ -0.66
LIN54-201ENST00000340417 ESPL1Q14674 2120 aa10.94□□□□□ -0.66
LIN54-201ENST00000340417 PEA15Q15121 130 aa10.94□□□□□ -0.66
LIN54-201ENST00000340417 SAXO1Q8IYX7 474 aa10.94□□□□□ -0.66
LIN54-201ENST00000340417 LILRB1Q8NHL6 650 aaPredicted RBP10.94□□□□□ -0.66
LIN54-201ENST00000340417 ACTR3CQ9C0K3 210 aaPredicted RBP10.94□□□□□ -0.66
LIN54-201ENST00000340417 TMED3Q9Y3Q3 217 aa10.94□□□□□ -0.66
LIN54-201ENST00000340417 UBE2L5PA0A1B0GUS4 154 aa10.94□□□□□ -0.66
LIN54-201ENST00000340417 A0A1W2PRX2 142 aa10.94□□□□□ -0.66
LIN54-201ENST00000340417 LALBAP00709 142 aa10.94□□□□□ -0.66
LIN54-201ENST00000340417 HOXD11P31277 338 aaPredicted RBP10.94□□□□□ -0.66
LIN54-201ENST00000340417 RPL27AP46776 148 aaKnown RBP10.94□□□□□ -0.66
LIN54-201ENST00000340417 H0YL77 283 aa10.94□□□□□ -0.66
LIN54-201ENST00000340417 CST4P01036 141 aa10.94□□□□□ -0.66
LIN54-201ENST00000340417 PPYP01298 95 aa10.94□□□□□ -0.66
LIN54-201ENST00000340417 UBE2MP61081 183 aaKnown RBP10.94□□□□□ -0.66
LIN54-201ENST00000340417 LEAP2Q969E1 77 aa10.94□□□□□ -0.66
LIN54-201ENST00000340417 Q96MF0 132 aa10.94□□□□□ -0.66
LIN54-201ENST00000340417 RHOFQ9HBH0 211 aa10.94□□□□□ -0.66
LIN54-201ENST00000340417 COX5AP20674 150 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 DYNC2LI1Q8TCX1 351 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 ABHD14BQ96IU4 210 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 FLVCR2Q9UPI3 526 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 LTBP2Q14767 1821 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 TXNL1O43396 289 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 ORM2P19652 201 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 GLIPR1P48060 266 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 GLDNQ6ZMI3 551 aaPredicted RBP10.93□□□□□ -0.66
LIN54-201ENST00000340417 MS4A10Q96PG2 267 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms