RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 SEC61A1P61619 476 aaKnown RBP12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 LMO4P61968 165 aa12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 HTD2P86397 168 aa12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 HERPUD1Q15011 391 aa12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 FAAP20Q6NZ36 180 aa12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 BTN2A1Q7KYR7 527 aa12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 FGFRL1Q8N441 504 aa12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 OR51S1Q8NGJ8 323 aa12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 OR6F1Q8NGZ6 308 aa12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 OR56B4Q8NH76 319 aa12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 OR10J5Q8NHC4 309 aa12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 IL1F10Q8WWZ1 152 aa12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 ARL11Q969Q4 196 aa12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 KIRREL1Q96J84 757 aa12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 ZNF714Q96N38 554 aa12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 SLC6A7Q99884 636 aa12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 GINS4Q9BRT9 223 aa12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 CALYQ9NYX4 217 aa12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 RPUSD1Q9UJJ7 312 aaKnown RBP12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.01□□□□□ -0.495e-6■□□□□ 9.9
NIPAL3-202ENST00000339255 ABCA2Q9BZC7 2435 aa12.01□□□□□ -0.49
NIPAL3-202ENST00000339255 TRBV6-7A0A0A0MS04 114 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 HSPA12AO43301 675 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 RBP4P02753 201 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 CGB3P0DN86 165 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 CGB7P0DN87 165 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 ZBTB25P24278 435 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 BTCP35070 178 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 RBMS2Q15434 407 aaKnown RBP12□□□□□ -0.49
NIPAL3-202ENST00000339255 IGSF11Q5DX21 431 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 Q5PR19 223 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 DHRS11Q6UWP2 260 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 TCF23Q7RTU1 214 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 NRARPQ7Z6K4 114 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 FAM185AQ8N0U4 392 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 PRR18Q8N4B5 295 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 OR10A7Q8NGE5 316 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 CHPT1Q8WUD6 406 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 DPAGT1Q9H3H5 408 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 PRRC2AP48634 2157 aaKnown RBP12□□□□□ -0.49
NIPAL3-202ENST00000339255 LOC105371242A0A075B767 164 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 F2RL2O00254 374 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 SDCBPO00560 298 aaPredicted RBP12□□□□□ -0.49
NIPAL3-202ENST00000339255 BET1O15155 118 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 FOXH1O75593 365 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 ZNF735P0CB33 412 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 ZNF728P0DKX0 622 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 ECI1P42126 302 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 TRIM16LQ309B1 348 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 TMEM200BQ69YZ2 307 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 IDO2Q6ZQW0 420 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 DUSP18Q8NEJ0 188 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 TERB2Q8NHR7 220 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 FAM216AQ8WUB2 273 aa12□□□□□ -0.49
NIPAL3-202ENST00000339255 SLC25A21Q9BQT8 299 aaPredicted RBP12□□□□□ -0.49
NIPAL3-202ENST00000339255 MAP1AP78559 2803 aaPredicted RBP11.99□□□□□ -0.49
NIPAL3-202ENST00000339255 IGKV1-6A0A0C4DH72 117 aa11.99□□□□□ -0.49
NIPAL3-202ENST00000339255 hCG_1809904A0A1W2PP81 198 aa11.99□□□□□ -0.49
NIPAL3-202ENST00000339255 A0A1W2PPE2 198 aa11.99□□□□□ -0.49
NIPAL3-202ENST00000339255 A0A1W2PR64 198 aa11.99□□□□□ -0.49
NIPAL3-202ENST00000339255 A0A1W2PRV1 198 aa11.99□□□□□ -0.49
NIPAL3-202ENST00000339255 LIPFP07098 398 aa11.99□□□□□ -0.49
NIPAL3-202ENST00000339255 USF1P22415 310 aaPredicted RBP11.99□□□□□ -0.49
NIPAL3-202ENST00000339255 FPR2P25090 351 aa11.99□□□□□ -0.49
NIPAL3-202ENST00000339255 SCGB2B2Q4G0G5 96 aa11.99□□□□□ -0.49
NIPAL3-202ENST00000339255 PLA1AQ53H76 456 aa11.99□□□□□ -0.49
NIPAL3-202ENST00000339255 HEPN1Q6WQI6 88 aa11.99□□□□□ -0.49
NIPAL3-202ENST00000339255 LY6G5BQ8NDX9 201 aa11.99□□□□□ -0.49
NIPAL3-202ENST00000339255 OR52M1Q8NGK5 317 aa11.99□□□□□ -0.49
NIPAL3-202ENST00000339255 OR1L1Q8NH94 360 aa11.99□□□□□ -0.49
NIPAL3-202ENST00000339255 GIMAP1Q8WWP7 306 aa11.99□□□□□ -0.49
NIPAL3-202ENST00000339255 SLC23A1Q9UHI7 598 aa11.99□□□□□ -0.49
NIPAL3-202ENST00000339255 JPT1Q9UK76 154 aa11.99□□□□□ -0.49
NIPAL3-202ENST00000339255 IGHV4-61A0A0C4DH41 118 aa11.98□□□□□ -0.49
NIPAL3-202ENST00000339255 KIAA1324LA8MWY0 1029 aaPredicted RBP11.98□□□□□ -0.49
NIPAL3-202ENST00000339255 PHF1O43189 567 aaPredicted RBP11.98□□□□□ -0.49
NIPAL3-202ENST00000339255 ENSAO43768 121 aaKnown RBP11.98□□□□□ -0.49
NIPAL3-202ENST00000339255 RGS11O94810 467 aa11.98□□□□□ -0.49
NIPAL3-202ENST00000339255 NDUFB6O95139 128 aa11.98□□□□□ -0.49
NIPAL3-202ENST00000339255 HERV-K104P61576 105 aa11.98□□□□□ -0.49
NIPAL3-202ENST00000339255 ZNF273Q14593 569 aa11.98□□□□□ -0.49
NIPAL3-202ENST00000339255 OXA1LQ15070 435 aa11.98□□□□□ -0.49
NIPAL3-202ENST00000339255 SURF2Q15527 256 aaPredicted RBP11.98□□□□□ -0.49
NIPAL3-202ENST00000339255 ZNF660Q6AZW8 331 aaPredicted RBP11.98□□□□□ -0.49
NIPAL3-202ENST00000339255 OR2S2Q9NQN1 319 aa11.98□□□□□ -0.49
NIPAL3-202ENST00000339255 POLR3KQ9Y2Y1 108 aaPredicted RBP11.98□□□□□ -0.49
NIPAL3-202ENST00000339255 ARHGAP32A7KAX9 2087 aa11.98□□□□□ -0.49
NIPAL3-202ENST00000339255 CSMD2Q7Z408 3487 aa11.98□□□□□ -0.49
NIPAL3-202ENST00000339255 PPIAL4CA0A0B4J2A2 164 aa11.97□□□□□ -0.49
NIPAL3-202ENST00000339255 C22orf46C9J442 243 aa11.97□□□□□ -0.49
NIPAL3-202ENST00000339255 TUSC2O75896 110 aa11.97□□□□□ -0.49
NIPAL3-202ENST00000339255 PPIAL4GP0DN37 164 aa11.97□□□□□ -0.49
NIPAL3-202ENST00000339255 FCGR2CP31995 323 aa11.97□□□□□ -0.49
NIPAL3-202ENST00000339255 CCR6P51684 374 aa11.97□□□□□ -0.49
NIPAL3-202ENST00000339255 C17orf58Q2M2W7 97 aa11.97□□□□□ -0.49
NIPAL3-202ENST00000339255 PLET1Q6UQ28 207 aa11.97□□□□□ -0.49
NIPAL3-202ENST00000339255 LHFPL1Q86WI0 220 aa11.97□□□□□ -0.49
NIPAL3-202ENST00000339255 H1FOOQ8IZA3 346 aaPredicted RBP11.97□□□□□ -0.49
NIPAL3-202ENST00000339255 KIR3DL3Q8N743 410 aa11.97□□□□□ -0.49
NIPAL3-202ENST00000339255 RFESDQ8TAC1 157 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms