RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 PNRC2Q9NPJ4 139 aaKnown RBP7.43□□□□□ -1.22
TDP1-201ENST00000335725 TAAR2Q9P1P5 351 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 VPREB3Q9UKI3 123 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 DEGS1O15121 323 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 TNFP01375 233 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 SPINK8P0C7L1 97 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 RELBQ01201 579 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 ROM1Q03395 351 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 RTP5Q14D33 572 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 CDC20BQ86Y33 519 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 ARHGEF39Q8N4T4 335 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 OR52E2Q8NGJ4 325 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 OR2I1PQ8NGU4 316 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 SGMS2Q8NHU3 365 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 PPTC7Q8NI37 304 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 PLPPR1Q8TBJ4 325 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 C16orf70Q9BSU1 422 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 COMMD5Q9GZQ3 224 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 ZNF665Q9H7R5 613 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 CA2P00918 260 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 CEBPBP17676 345 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 PSMB3P49720 205 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 C1orf210Q8IVY1 113 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 ATOH7Q8N100 152 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 TTC9CQ8N5M4 171 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 ATG10Q9H0Y0 220 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 HRKO00198 91 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 ISLRO14498 428 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 XRCC2O43543 280 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 PI3P19957 117 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 CCKBRP32239 447 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 PSEN2P49810 448 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 PFN3P60673 137 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 CPEB2Q7Z5Q1 589 aaKnown RBP7.42□□□□□ -1.22
TDP1-201ENST00000335725 PP6455Q8WZ26 134 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 SGIP1Q9BQI5 828 aa7.42□□□□□ -1.22
TDP1-201ENST00000335725 H3BUT2 72 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 ZNF20P17024 532 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 TCL1AP56279 114 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 TAS2R46P59540 309 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 GRB2P62993 217 aaKnown RBP7.41□□□□□ -1.22
TDP1-201ENST00000335725 ZNF658BQ4V348 819 aaPredicted RBP7.41□□□□□ -1.22
TDP1-201ENST00000335725 C8orf86Q6ZUL3 223 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 SCCPDHQ8NBX0 429 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 NKD1Q969G9 470 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 C19orf24Q9BVV8 132 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 KLHL13Q9P2N7 655 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 MED31Q9Y3C7 131 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 A0A0G2JLM5 398 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 hADV38S2A0JD32 116 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 ZNF737O75373 536 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 MT-ND6P03923 174 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 KLK1P06870 262 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 NGFRP08138 427 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 SLC25A6P12236 298 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 IGFBP2P18065 325 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 GPR183P32249 361 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 DUSP2Q05923 314 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 POU2AF1Q16633 256 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 OR51T1Q8NGJ9 327 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 REPIN1Q9BWE0 567 aaKnown RBP7.41□□□□□ -1.22
TDP1-201ENST00000335725 RNF114Q9Y508 228 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 CLEC3AO75596 197 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 IGLV3-25P01717 112 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 HTR1DP28221 377 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 PTGER1P34995 402 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 REG1BP48304 166 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 MEF2CQ06413 473 aaPredicted RBP7.41□□□□□ -1.22
TDP1-201ENST00000335725 IGFBP7Q16270 282 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 BRICD5Q6PL45 260 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 LHFPL1Q86WI0 220 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 OR6K6Q8NGW6 343 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 STRADBQ9C0K7 418 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 CRLS1Q9UJA2 301 aa7.41□□□□□ -1.22
TDP1-201ENST00000335725 GAGE12JA6NER3 117 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 H7C1C5 153 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 FCN1O00602 326 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 SLC31A1O15431 190 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 UPK3AO75631 287 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 GAGE7O76087 117 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 GAGE12FP0CL80 117 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 GAGE12GP0CL81 117 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 GAGE12IP0CL82 117 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 CRYBB3P26998 211 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 GPR1P46091 355 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 FUT6P51993 359 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 TMPRSS3P57727 454 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 POU3F1Q03052 451 aaPredicted RBP7.4□□□□□ -1.22
TDP1-201ENST00000335725 GAGE4Q13068 117 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 C9orf57Q5W0N0 161 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 CLDND1Q9NY35 253 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 TAAR3PQ9P1P4 343 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 ZNF443Q9Y2A4 671 aaPredicted RBP7.4□□□□□ -1.22
TDP1-201ENST00000335725 ZNF257Q9Y2Q1 563 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 HS3ST4Q9Y661 456 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 LOC102725191A0A1B0GVB3 256 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 A0A1W2PS18 150 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 ANKRD66B4E2M5 251 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 FOXH1O75593 365 aa7.4□□□□□ -1.22
TDP1-201ENST00000335725 HIST1H1EP10412 219 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms