RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 SSBP4Q9BWG4 385 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-201ENST00000335551 MRPL18Q9H0U6 180 aaKnown RBP5.47□□□□□ -1.53
CSMD1-201ENST00000335551 ZDHHC8Q9ULC8 765 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 A0A0U1RQS6 177 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 A0A1W2PR48 441 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 LINC01553A4QN01 128 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 FZD5Q13467 585 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 TCTN1Q2MV58 587 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 OR8G5Q8NG78 346 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 EML5Q05BV3 1969 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 SLURP2P0DP57 97 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 EMDP50402 254 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF137PP52743 207 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 RAC3P60763 192 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 CKS1BP61024 79 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 KLF9Q13886 244 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-201ENST00000335551 LDLRAD3Q86YD5 345 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 TSC2P49815 1807 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 NDUFB3O43676 98 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 CXCL3P19876 107 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 IBA57Q5T440 356 aaKnown RBP5.47□□□□□ -1.53
CSMD1-201ENST00000335551 RPS19BP1Q86WX3 136 aaKnown RBP5.47□□□□□ -1.53
CSMD1-201ENST00000335551 R3HDM4Q96D70 268 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 MGST2Q99735 147 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 KLF13Q9Y2Y9 288 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-201ENST00000335551 CTAG1AP78358 180 aa5.46□□□□□ -1.53
CSMD1-201ENST00000335551 RGP1Q92546 391 aaPredicted RBP5.46□□□□□ -1.53
CSMD1-201ENST00000335551 SIGMAR1Q99720 223 aa5.46□□□□□ -1.53
CSMD1-201ENST00000335551 TMEM189A5PLL7 270 aa5.46□□□□□ -1.53
CSMD1-201ENST00000335551 PMELP40967 661 aa5.46□□□□□ -1.53
CSMD1-201ENST00000335551 KISS1RQ969F8 398 aaPredicted RBP5.46□□□□□ -1.53
CSMD1-201ENST00000335551 PCGF1Q9BSM1 259 aa5.46□□□□□ -1.53
CSMD1-201ENST00000335551 FGF21Q9NSA1 209 aa5.46□□□□□ -1.53
CSMD1-201ENST00000335551 PAGE4O60829 102 aa5.46□□□□□ -1.53
CSMD1-201ENST00000335551 MOSPD3O75425 235 aa5.46□□□□□ -1.53
CSMD1-201ENST00000335551 IL2RAP01589 272 aa5.46□□□□□ -1.53
CSMD1-201ENST00000335551 PRSS2P07478 247 aa5.46□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF865P0CJ78 1059 aaPredicted RBP5.46□□□□□ -1.53
CSMD1-201ENST00000335551 OR10D3Q8NH80 312 aa5.46□□□□□ -1.53
CSMD1-201ENST00000335551 ELOVL5Q9NYP7 299 aa5.46□□□□□ -1.53
CSMD1-201ENST00000335551 TNFSF18Q9UNG2 199 aa5.46□□□□□ -1.53
CSMD1-201ENST00000335551 HIGD1AQ9Y241 93 aa5.46□□□□□ -1.53
CSMD1-201ENST00000335551 OTOGLQ3ZCN5 2332 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 hADV38S2A0JD32 116 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 KLK8O60259 260 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 GHRHP01286 108 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 ZNF735P0CB33 412 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 MAS1LP35410 378 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 CEACAM3P40198 252 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 OR3A4PP47883 348 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 SKP2Q13309 424 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 OR8I2Q8N0Y5 310 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 ALKBH3Q96Q83 286 aaPredicted RBP5.46□□□□□ -1.54
CSMD1-201ENST00000335551 NRG2O14511 850 aaPredicted RBP5.46□□□□□ -1.54
CSMD1-201ENST00000335551 NGFP01138 241 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 EIF3IQ13347 325 aaKnown RBP5.46□□□□□ -1.54
CSMD1-201ENST00000335551 ZNF770Q6IQ21 691 aaPredicted RBP5.46□□□□□ -1.54
CSMD1-201ENST00000335551 OR11H7Q8NGC8 314 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 MED29Q9NX70 200 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 NPIPB8E9PQR5 432 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 NPIPB9F8W1W9 429 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 NPIPB7O75200 414 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 CTSSP25774 331 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 FAM53AQ6NSI3 398 aaPredicted RBP5.46□□□□□ -1.54
CSMD1-201ENST00000335551 GPR27Q9NS67 375 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 COA4Q9NYJ1 87 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 TRAV8-7A0A075B6U6 113 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 IDSB3KWA1 339 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 CHST1O43916 411 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 GNG7O60262 68 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 GJB3O75712 270 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 PPP1R17O96001 155 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 POLR2GP62487 172 aaKnown RBP eCLIP5.46□□□□□ -1.54
CSMD1-201ENST00000335551 HSF5Q4G112 596 aaPredicted RBP5.46□□□□□ -1.54
CSMD1-201ENST00000335551 TEPPQ6URK8 271 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 LINC00696Q6ZRV3 163 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 SARAFQ96BY9 339 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 WNT5BQ9H1J7 359 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 DNAJB12Q9NXW2 375 aaKnown RBP5.46□□□□□ -1.54
CSMD1-201ENST00000335551 FXYD1O00168 92 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 ATP5IP56385 69 aaPredicted RBP5.46□□□□□ -1.54
CSMD1-201ENST00000335551 PUSL1Q8N0Z8 303 aaKnown RBP5.46□□□□□ -1.54
CSMD1-201ENST00000335551 ZBTB34Q8NCN2 500 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 OR2Y1Q8NGV0 311 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 OR13C6PQ8NH95 151 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 SRSF5Q13243 272 aaKnown RBP5.46□□□□□ -1.54
CSMD1-201ENST00000335551 LRP10Q7Z4F1 713 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 ZNF683Q8IZ20 524 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 FIZ1Q96SL8 496 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 PAXXQ9BUH6 204 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 CNTD2Q9H8S5 307 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 CISD1Q9NZ45 108 aaKnown RBP5.46□□□□□ -1.54
CSMD1-201ENST00000335551 V9GYH0 126 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 FAM208BQ5VWN6 2430 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 XIRP1Q702N8 1843 aaKnown RBP5.46□□□□□ -1.54
CSMD1-201ENST00000335551 A0A087WUJ7 227 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 GFYI3L273 518 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 GLIPR1P48060 266 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 MNX1P50219 401 aaPredicted RBP5.46□□□□□ -1.54
CSMD1-201ENST00000335551 TMEM207Q6UWW9 146 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms