RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 LOC101059948A0A1B0GTJ6 334 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 TEX50A0A1B0GTY4 177 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 MAP1LC3B2A6NCE7 125 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 F5H697 171 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 IGF2P01344 180 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 ERGP11308 486 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 KIR2DS2P43631 304 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 CYB5R2Q6BCY4 276 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 OR11H7Q8NGC8 314 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 MAP1LC3BQ9GZQ8 125 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 SLC25A10Q9UBX3 287 aaPredicted RBP8.86□□□□□ -0.99
CHD3-201ENST00000330494 KLK13Q9UKR3 277 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 NKX2-6A6NCS4 301 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 RHOVQ96L33 236 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 RASL11BQ9BPW5 248 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 SRXN1Q9BYN0 137 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 AKIRIN1Q9H9L7 192 aaPredicted RBP8.86□□□□□ -0.99
CHD3-201ENST00000330494 SULT1A2P50226 295 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 ERVS71-1P61550 626 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 FAM162BQ5T6X4 162 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 TMEM204Q9BSN7 226 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 M0QZK8 103 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 GGCTO75223 188 aaKnown RBP8.86□□□□□ -0.99
CHD3-201ENST00000330494 CEACAM3P40198 252 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 LGALS7P47929 136 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 GGTLC2Q14390 218 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 C19orf35Q6ZS72 473 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 TGIF2LYQ8IUE0 185 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 OR2V2Q96R30 315 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 MARVELD1Q9BSK0 173 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 CLN8Q9UBY8 286 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 A0A1W2PN81 502 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 HPXP02790 462 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 RNF224P0DH78 156 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 PGA4P0DJD7 388 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 CDC34P49427 236 aaPredicted RBP8.85□□□□□ -0.99
CHD3-201ENST00000330494 NAAAQ02083 359 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 INO80CQ6PI98 192 aaPredicted RBP8.85□□□□□ -0.99
CHD3-201ENST00000330494 OR52L2PQ8NGH6 319 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 ALPK2Q86TB3 2170 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 CLDN14O95500 239 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 ZXDCQ2QGD7 858 aaPredicted RBP8.85□□□□□ -0.99
CHD3-201ENST00000330494 TMEM97Q5BJF2 176 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 ABHD14BQ96IU4 210 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 ASCL3Q9NQ33 180 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 LNP1A1A4G5 178 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 COX6A1P12074 109 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 DAOP14920 347 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 GNG4P50150 75 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 UCP2P55851 309 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 NHLH1Q02575 133 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 NHLH2Q02577 135 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 HARBI1Q96MB7 349 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 TMEM208Q9BTX3 173 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 GCM2O75603 506 aaPredicted RBP8.85□□□□□ -0.99
CHD3-201ENST00000330494 HLA-DRB3P79483 266 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 RGP1Q92546 391 aaPredicted RBP8.85□□□□□ -0.99
CHD3-201ENST00000330494 GSX1Q9H4S2 264 aaPredicted RBP8.85□□□□□ -0.99
CHD3-201ENST00000330494 RNF122Q9H9V4 155 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 KCNE5Q9UJ90 142 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 VSIG4Q9Y279 399 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 LTBP1Q14766 1721 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 TMEM127O75204 238 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 FGF5P12034 268 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 ZNF318Q5VUA4 2279 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 RGS13O14921 159 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 FAHD2BQ6P2I3 314 aaPredicted RBP8.85□□□□□ -0.99
CHD3-201ENST00000330494 OR5A2Q8NGI9 324 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 FAHD2AQ96GK7 314 aa8.85□□□□□ -0.99
CHD3-201ENST00000330494 APC2O95996 2303 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 MS4A18H0YCH9 400 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 CYB5R3P00387 301 aaPredicted RBP8.84□□□□□ -0.99
CHD3-201ENST00000330494 PRDX2P32119 198 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 CD200P41217 278 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 MS4A18Q3C1V0 323 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 FLYWCH2Q96CP2 140 aaKnown RBP8.84□□□□□ -0.99
CHD3-201ENST00000330494 FER1L5A0AVI2 2057 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 J3QT63 122 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 MPV17LQ2QL34 196 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 PRSS54Q6PEW0 395 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 LEAP2Q969E1 77 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 SNX22Q96L94 193 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 CHST5Q9GZS9 411 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 NAT8BQ9UHF3 227 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 SLC6A1P30531 599 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 WNT5AP41221 380 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 AMTP48728 403 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 CAMPP49913 170 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 TCL1AP56279 114 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 IL13RA2Q14627 380 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 SLC25A30Q5SVS4 291 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 WSB1Q9Y6I7 421 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 ELOA3CA0A087WX78 387 aaPredicted RBP8.84□□□□□ -0.99
CHD3-201ENST00000330494 INHBBP09529 407 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 RPL31P62899 125 aaKnown RBP8.84□□□□□ -0.99
CHD3-201ENST00000330494 SPICQ8N5J4 248 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 BVESQ8NE79 360 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 OR4P4Q8NGL7 312 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 NTNG2Q96CW9 530 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms