RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 FGF16O43320 207 aa12.21□□□□□ -0.45
EPHB3-201ENST00000330394 SNRPCP09234 159 aaKnown RBP12.21□□□□□ -0.45
EPHB3-201ENST00000330394 ADCYAP1P18509 176 aa12.21□□□□□ -0.45
EPHB3-201ENST00000330394 MEF2BQ02080 365 aaPredicted RBP12.21□□□□□ -0.45
EPHB3-201ENST00000330394 COTL1Q14019 142 aa12.21□□□□□ -0.45
EPHB3-201ENST00000330394 SPNS3Q6ZMD2 512 aa12.21□□□□□ -0.45
EPHB3-201ENST00000330394 Q8WTZ3 238 aa12.21□□□□□ -0.45
EPHB3-201ENST00000330394 CLN8Q9UBY8 286 aa12.21□□□□□ -0.45
EPHB3-201ENST00000330394 HEATR1Q9H583 2144 aaKnown RBP12.21□□□□□ -0.45
EPHB3-201ENST00000330394 RIF1Q5UIP0 2472 aaKnown RBP12.21□□□□□ -0.46
EPHB3-201ENST00000330394 A6NCN8 305 aa12.21□□□□□ -0.46
EPHB3-201ENST00000330394 SNURFLB1AK76 121 aa12.21□□□□□ -0.46
EPHB3-201ENST00000330394 CHEK1O14757 476 aa12.21□□□□□ -0.46
EPHB3-201ENST00000330394 HOXA5P20719 270 aa12.21□□□□□ -0.46
EPHB3-201ENST00000330394 EIF3IQ13347 325 aaKnown RBP12.21□□□□□ -0.46
EPHB3-201ENST00000330394 HES3Q5TGS1 186 aa12.21□□□□□ -0.46
EPHB3-201ENST00000330394 GFI1BQ5VTD9 330 aa12.21□□□□□ -0.46
EPHB3-201ENST00000330394 GUSBP11Q6P575 273 aa12.21□□□□□ -0.46
EPHB3-201ENST00000330394 MRGPRDQ8TDS7 321 aa12.21□□□□□ -0.46
EPHB3-201ENST00000330394 RPRMQ9NS64 109 aa12.21□□□□□ -0.46
EPHB3-201ENST00000330394 TUBD1Q9UJT1 453 aa12.21□□□□□ -0.46
EPHB3-201ENST00000330394 RNF24Q9Y225 148 aa12.21□□□□□ -0.46
EPHB3-201ENST00000330394 SLC31A2O15432 143 aa12.2□□□□□ -0.46
EPHB3-201ENST00000330394 TSPAN2O60636 221 aa12.2□□□□□ -0.46
EPHB3-201ENST00000330394 OR8B8Q15620 311 aa12.2□□□□□ -0.46
EPHB3-201ENST00000330394 AARDQ4LEZ3 155 aa12.2□□□□□ -0.46
EPHB3-201ENST00000330394 SSUH2Q9Y2M2 353 aa12.2□□□□□ -0.46
EPHB3-201ENST00000330394 DOCK11Q5JSL3 2073 aa12.2□□□□□ -0.46
EPHB3-201ENST00000330394 G6PCP35575 357 aa12.2□□□□□ -0.46
EPHB3-201ENST00000330394 CCL7P80098 99 aa12.2□□□□□ -0.46
EPHB3-201ENST00000330394 NOL4LQ96MY1 436 aaPredicted RBP12.2□□□□□ -0.46
EPHB3-201ENST00000330394 TMEM222Q9H0R3 208 aa12.2□□□□□ -0.46
EPHB3-201ENST00000330394 SRD5A3Q9H8P0 318 aa12.2□□□□□ -0.46
EPHB3-201ENST00000330394 TAAR3PQ9P1P4 343 aa12.2□□□□□ -0.46
EPHB3-201ENST00000330394 DNAH12Q6ZR08 3092 aa12.2□□□□□ -0.46
EPHB3-201ENST00000330394 GLIPR1P48060 266 aa12.2□□□□□ -0.46
EPHB3-201ENST00000330394 TMEM211Q6ICI0 200 aa12.2□□□□□ -0.46
EPHB3-201ENST00000330394 TP53RKQ96S44 253 aa12.2□□□□□ -0.46
EPHB3-201ENST00000330394 RBKSQ9H477 322 aa12.2□□□□□ -0.46
EPHB3-201ENST00000330394 HEATR5AQ86XA9 2040 aa12.2□□□□□ -0.46
EPHB3-201ENST00000330394 GRIFINA4D1Z8 144 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 C5orf52A6NGY3 159 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 NDUFB4O95168 129 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 ALKBH6Q3KRA9 238 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 TCTEX1D1Q8N7M0 179 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 LOC102723971A0A1B0GUV8 181 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 NDUFB7P17568 137 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 GNG4P50150 75 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 SLC22A18ASQ8N1D0 253 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 DTD1Q8TEA8 209 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 IER2Q9BTL4 223 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 RAB9BQ9NP90 201 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 AUP1Q9Y679 476 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 CD46P15529 392 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 F2RP25116 425 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 TAS2R45P59539 299 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 RAC1P63000 192 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 COL19A1Q14993 1142 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 SNAI3Q3KNW1 292 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 H1FXQ92522 213 aaKnown RBP12.19□□□□□ -0.46
EPHB3-201ENST00000330394 TMEM230Q96A57 120 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 OR4C12Q96R67 309 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 FZR1Q9UM11 496 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 PATJQ8NI35 1801 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 GPR179Q6PRD1 2367 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 FER1L5A0AVI2 2057 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 IGSF23A1L1A6 192 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 CCL3P10147 92 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 ARR3P36575 388 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 CD81P60033 236 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 RTN4RL2Q86UN3 420 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 C11orf42Q8N5U0 333 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 ABHD3Q8WU67 409 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 ANAPC16Q96DE5 110 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 SLC35E1Q96K37 410 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 OR2W1Q9Y3N9 320 aa12.19□□□□□ -0.46
EPHB3-201ENST00000330394 NOTCH3Q9UM47 2321 aa12.18□□□□□ -0.46
EPHB3-201ENST00000330394 RRP8O43159 456 aaKnown RBP12.18□□□□□ -0.46
EPHB3-201ENST00000330394 FCER1GP30273 86 aa12.18□□□□□ -0.46
EPHB3-201ENST00000330394 CCL20P78556 96 aa12.18□□□□□ -0.46
EPHB3-201ENST00000330394 TMEM187Q14656 261 aa12.18□□□□□ -0.46
EPHB3-201ENST00000330394 RTP5Q14D33 572 aa12.18□□□□□ -0.46
EPHB3-201ENST00000330394 CDCP2Q5VXM1 449 aa12.18□□□□□ -0.46
EPHB3-201ENST00000330394 LINC00114Q6XXX2 140 aa12.18□□□□□ -0.46
EPHB3-201ENST00000330394 ZNF552Q9H707 407 aaPredicted RBP12.18□□□□□ -0.46
EPHB3-201ENST00000330394 BET1LQ9NYM9 111 aa12.18□□□□□ -0.46
EPHB3-201ENST00000330394 CREBBPQ92793 2442 aa12.18□□□□□ -0.46
EPHB3-201ENST00000330394 INTS1Q8N201 2190 aaKnown RBP12.18□□□□□ -0.46
EPHB3-201ENST00000330394 UBE2CO00762 179 aa12.18□□□□□ -0.46
EPHB3-201ENST00000330394 HRASP01112 189 aa12.18□□□□□ -0.46
EPHB3-201ENST00000330394 MELTFP08582 738 aa12.18□□□□□ -0.46
EPHB3-201ENST00000330394 HLA-DRB5Q30154 266 aa12.18□□□□□ -0.46
EPHB3-201ENST00000330394 PAQR4Q8N4S7 273 aaPredicted RBP12.18□□□□□ -0.46
EPHB3-201ENST00000330394 KDF1Q8NAX2 398 aaPredicted RBP12.18□□□□□ -0.46
EPHB3-201ENST00000330394 NAGKQ9UJ70 344 aa12.18□□□□□ -0.46
EPHB3-201ENST00000330394 PKDREJQ9NTG1 2253 aa12.18□□□□□ -0.46
EPHB3-201ENST00000330394 F8VVB4 439 aa12.18□□□□□ -0.46
EPHB3-201ENST00000330394 F8VWA3 439 aa12.18□□□□□ -0.46
EPHB3-201ENST00000330394 RBM11P57052 281 aaKnown RBP12.18□□□□□ -0.46
EPHB3-201ENST00000330394 ADIPOR1Q96A54 375 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms