RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 ZFP41Q8N8Y5 198 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 ZNF485Q8NCK3 441 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 RGP1Q92546 391 aaPredicted RBP11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 CLEC7AQ9BXN2 247 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 CCDC90BQ9GZT6 254 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 METTL9Q9H1A3 318 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 DPM3Q9P2X0 92 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 RAB26Q9ULW5 256 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 SIRPB1O00241 398 aa11.44□□□□□ -0.58
CTHRC1-201ENST00000330295 ZNF780AO75290 641 aaPredicted RBP11.44□□□□□ -0.58
CTHRC1-201ENST00000330295 ZNF737O75373 536 aa11.44□□□□□ -0.58
CTHRC1-201ENST00000330295 LALBAP00709 142 aa11.44□□□□□ -0.58
CTHRC1-201ENST00000330295 CALCBP10092 127 aa11.44□□□□□ -0.58
CTHRC1-201ENST00000330295 PTGFRP43088 359 aa11.44□□□□□ -0.58
CTHRC1-201ENST00000330295 FOXE3Q13461 319 aa11.44□□□□□ -0.58
CTHRC1-201ENST00000330295 GPR176Q14439 515 aa11.44□□□□□ -0.58
CTHRC1-201ENST00000330295 ASPHD1Q5U4P2 390 aa11.44□□□□□ -0.58
CTHRC1-201ENST00000330295 SLC35E3Q7Z769 313 aa11.44□□□□□ -0.58
CTHRC1-201ENST00000330295 OR52N4Q8NGI2 321 aa11.44□□□□□ -0.58
CTHRC1-201ENST00000330295 FAM110AQ9BQ89 295 aa11.44□□□□□ -0.58
CTHRC1-201ENST00000330295 ING4Q9UNL4 249 aa11.44□□□□□ -0.58
CTHRC1-201ENST00000330295 HERC1Q15751 4861 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 TRGV10A0A0A0MS01 117 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 IGKV1-12A0A0C4DH73 117 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 GPX5O75715 221 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 OR2H2O95918 312 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 IGKV1D-12P01611 117 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 IGHG2P01859 326 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 ERP29P30040 261 aaKnown RBP11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 ZP1P60852 638 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 GPR50Q13585 617 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 MED22Q15528 200 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 RBM48Q5RL73 367 aaKnown RBP11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 ELP2Q6IA86 826 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 TRAPPC6BQ86SZ2 158 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 CDH26Q8IXH8 852 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 C5orf56Q8N8D9 126 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 OR51A2Q8NGJ7 313 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 OR13C5Q8NGS8 318 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 UFD1Q92890 307 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 PGLYRP3Q96LB9 341 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 CNBD2Q96M20 576 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 ZNF714Q96N38 554 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 OR14A2Q96R54 314 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 NR1H4Q96RI1 486 aaPredicted RBP11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 NABP2Q9BQ15 211 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 CHST6Q9GZX3 395 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 LINC00312Q9Y6C7 94 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 SESN1Q9Y6P5 492 aa11.43□□□□□ -0.58
CTHRC1-201ENST00000330295 TMEM82A0PJX8 343 aa11.42□□□□□ -0.58
CTHRC1-201ENST00000330295 GABRPO00591 440 aa11.42□□□□□ -0.58
CTHRC1-201ENST00000330295 OVOL1O14753 267 aa11.42□□□□□ -0.58
CTHRC1-201ENST00000330295 HTR3BO95264 441 aa11.42□□□□□ -0.58
CTHRC1-201ENST00000330295 ELANEP08246 267 aa11.42□□□□□ -0.58
CTHRC1-201ENST00000330295 P2RX3P56373 397 aa11.42□□□□□ -0.58
CTHRC1-201ENST00000330295 IL13RA2Q14627 380 aa11.42□□□□□ -0.58
CTHRC1-201ENST00000330295 JAGN1Q8N5M9 183 aa11.42□□□□□ -0.58
CTHRC1-201ENST00000330295 NKAIN3Q8N8D7 197 aa11.42□□□□□ -0.58
CTHRC1-201ENST00000330295 ZNF184Q99676 751 aaPredicted RBP11.42□□□□□ -0.58
CTHRC1-201ENST00000330295 TMEM133Q9H2Q1 129 aa11.42□□□□□ -0.58
CTHRC1-201ENST00000330295 GAL3ST2Q9H3Q3 398 aa11.42□□□□□ -0.58
CTHRC1-201ENST00000330295 DUSP21Q9H596 190 aa11.42□□□□□ -0.58
CTHRC1-201ENST00000330295 IL36RNQ9UBH0 155 aa11.42□□□□□ -0.58
CTHRC1-201ENST00000330295 UBE2J1Q9Y385 318 aaPredicted RBP11.42□□□□□ -0.58
CTHRC1-201ENST00000330295 VPS13DQ5THJ4 4388 aa11.41□□□□□ -0.58
CTHRC1-201ENST00000330295 TRBV5-7A0A0A0MS05 114 aa11.41□□□□□ -0.58
CTHRC1-201ENST00000330295 PSPNO60542 156 aa11.41□□□□□ -0.58
CTHRC1-201ENST00000330295 IGFBP3P17936 291 aaPredicted RBP11.41□□□□□ -0.58
CTHRC1-201ENST00000330295 RPS11P62280 158 aaKnown RBP eCLIP11.41□□□□□ -0.58
CTHRC1-201ENST00000330295 ZNF616Q08AN1 781 aa11.41□□□□□ -0.58
CTHRC1-201ENST00000330295 TRAM1Q15629 374 aa11.41□□□□□ -0.58
CTHRC1-201ENST00000330295 ASCL4Q6XD76 172 aa11.41□□□□□ -0.58
CTHRC1-201ENST00000330295 PRSS48Q7RTY5 328 aa11.41□□□□□ -0.58
CTHRC1-201ENST00000330295 LINC00596Q86U02 117 aa11.41□□□□□ -0.58
CTHRC1-201ENST00000330295 DCUN1D4Q92564 292 aa11.41□□□□□ -0.58
CTHRC1-201ENST00000330295 DERL3Q96Q80 235 aa11.41□□□□□ -0.58
CTHRC1-201ENST00000330295 BARHL1Q9BZE3 327 aa11.41□□□□□ -0.58
CTHRC1-201ENST00000330295 HIPK2Q9H2X6 1198 aa11.41□□□□□ -0.58
CTHRC1-201ENST00000330295 IL36GQ9NZH8 169 aa11.41□□□□□ -0.58
CTHRC1-201ENST00000330295 OR6C3Q9NZP0 311 aa11.41□□□□□ -0.58
CTHRC1-201ENST00000330295 A0A1W2PPK0 400 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 LINC01548A6NM66 108 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 LEUTXA8MZ59 168 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 AP4M1O00189 453 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 MAS1P04201 325 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 CSN2P05814 226 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 FAM106CPP0CH98 169 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 HSMCR30P0CW71 290 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 GTF2F2P13984 249 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 CRHBPP24387 322 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 PSMA1P25786 263 aaKnown RBP11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 RANBP1P43487 201 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 OR3A1P47881 315 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 KCNJ3P48549 501 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 ACSM3Q53FZ2 586 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 PAN3Q58A45 887 aaKnown RBP11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 KRBOX4Q5JUW0 171 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 OR52W1Q6IF63 320 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 TCF23Q7RTU1 214 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 ZNF565Q8N9K5 539 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms