RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 FAM90A5PA8MXJ8 464 aa11.97□□□□□ -0.49
ATP2C1-201ENST00000328560 FAM90A23PA8MXZ1 464 aa11.97□□□□□ -0.49
ATP2C1-201ENST00000328560 TXNL1O43396 289 aa11.97□□□□□ -0.49
ATP2C1-201ENST00000328560 OR2C1O95371 312 aa11.97□□□□□ -0.49
ATP2C1-201ENST00000328560 CTXN2P0C2S0 81 aa11.97□□□□□ -0.49
ATP2C1-201ENST00000328560 FAM90A15PP0C7V4 464 aa11.97□□□□□ -0.49
ATP2C1-201ENST00000328560 FAM90A13PP0C7W8 464 aa11.97□□□□□ -0.49
ATP2C1-201ENST00000328560 FAM90A14PP0C7W9 464 aa11.97□□□□□ -0.49
ATP2C1-201ENST00000328560 FAM90A24PP0C7X0 464 aa11.97□□□□□ -0.49
ATP2C1-201ENST00000328560 MEOX1P50221 254 aa11.97□□□□□ -0.49
ATP2C1-201ENST00000328560 RND3P61587 244 aa11.97□□□□□ -0.49
ATP2C1-201ENST00000328560 ATP1A1-AS1Q5TC04 95 aa11.97□□□□□ -0.49
ATP2C1-201ENST00000328560 HES3Q5TGS1 186 aa11.97□□□□□ -0.49
ATP2C1-201ENST00000328560 ZNF573Q86YE8 665 aa11.97□□□□□ -0.49
ATP2C1-201ENST00000328560 LFNGQ8NES3 379 aa11.97□□□□□ -0.49
ATP2C1-201ENST00000328560 TRAPPC2LQ9UL33 140 aa11.97□□□□□ -0.49
ATP2C1-201ENST00000328560 S100A9P06702 114 aaKnown RBP11.96□□□□□ -0.49
ATP2C1-201ENST00000328560 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.96□□□□□ -0.49
ATP2C1-201ENST00000328560 STX12Q86Y82 276 aa11.96□□□□□ -0.49
ATP2C1-201ENST00000328560 ZNF561Q8N587 486 aa11.96□□□□□ -0.49
ATP2C1-201ENST00000328560 OR2W1Q9Y3N9 320 aa11.96□□□□□ -0.49
ATP2C1-201ENST00000328560 H0YL77 283 aa11.96□□□□□ -0.49
ATP2C1-201ENST00000328560 ACAA1P09110 424 aaPredicted RBP11.96□□□□□ -0.49
ATP2C1-201ENST00000328560 ID3Q02535 119 aa11.96□□□□□ -0.49
ATP2C1-201ENST00000328560 PCSK4Q6UW60 755 aa11.96□□□□□ -0.49
ATP2C1-201ENST00000328560 MDP1Q86V88 176 aa11.96□□□□□ -0.49
ATP2C1-201ENST00000328560 CACNG5Q9UF02 275 aa11.96□□□□□ -0.49
ATP2C1-201ENST00000328560 OR14J1Q9UGF5 321 aa11.96□□□□□ -0.49
ATP2C1-201ENST00000328560 A0A1W2PNU3 283 aaPredicted RBP11.96□□□□□ -0.5
ATP2C1-201ENST00000328560 TUSC2O75896 110 aa11.96□□□□□ -0.5
ATP2C1-201ENST00000328560 IFNA4P05014 189 aa11.96□□□□□ -0.5
ATP2C1-201ENST00000328560 PMELP40967 661 aa11.96□□□□□ -0.5
ATP2C1-201ENST00000328560 RPS10P46783 165 aaKnown RBP11.96□□□□□ -0.5
ATP2C1-201ENST00000328560 SPOCK3Q9BQ16 436 aa11.96□□□□□ -0.5
ATP2C1-201ENST00000328560 TAAR3PQ9P1P4 343 aa11.96□□□□□ -0.5
ATP2C1-201ENST00000328560 IFNA5P01569 189 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 GRPP07492 148 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 METTL15P1P0C7V9 234 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 TAGLN2P37802 199 aaKnown RBP11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 IDH3GP51553 393 aaPredicted RBP11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 UBE2KP61086 200 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 NRN1LQ496H8 165 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 SAXO1Q8IYX7 474 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 Q8NFD4 153 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 RSG1Q9BU20 258 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 H0Y980 276 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 ERVS71-1P61550 626 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 RPL23AP62750 156 aaKnown RBP11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 OR2B11Q5JQS5 317 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 SPSB3Q6PJ21 355 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 LCN15Q6UWW0 184 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 Q6ZRM9 215 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 CYB561D1Q8N8Q1 229 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 OR1K1Q8NGR3 316 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 C11orf1Q9H5F2 150 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 TMEM9BQ9NQ34 198 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 GNG13Q9P2W3 67 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 RNF150Q9ULK6 438 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 MED12LQ86YW9 2145 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 PCSK5Q92824 1860 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 H3BQ15 152 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 SP1P08047 785 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 CELA3BP08861 270 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 UCP2P55851 309 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 HLA-DRB3P79483 266 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 TLE1Q04724 770 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 RNPS1Q15287 305 aaKnown RBP11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 TMPRSS7Q7RTY8 843 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 ODF3L1Q8IXM7 274 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 GCNT2Q8N0V5 402 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 OR5D13Q8NGL4 314 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 PLPPR1Q8TBJ4 325 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 NANOS1Q8WY41 292 aaKnown RBP11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 RNF122Q9H9V4 155 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 ATPIF1Q9UII2 106 aa11.95□□□□□ -0.5
ATP2C1-201ENST00000328560 ZFP92A6NM28 416 aa11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 CD59P13987 128 aa11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 HOXA4Q00056 320 aaPredicted RBP11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 FIP1L1Q6UN15 594 aaKnown RBP11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 DBX2Q6ZNG2 339 aa11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 CXorf67Q86X51 503 aaPredicted RBP11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 OR10V1Q8NGI7 309 aa11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 GNPNAT1Q96EK6 184 aaPredicted RBP11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 CDIPTO14735 213 aa11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 CEBPDP49716 269 aaPredicted RBP11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 PAX9P55771 341 aa11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 ZNF324BQ6AW86 544 aaPredicted RBP11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 SCGB1C1Q8TD33 95 aa11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 LOXL4Q96JB6 756 aa11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 WSB1Q9Y6I7 421 aa11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 NXPH2O95156 264 aa11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 FGF8P55075 233 aaPredicted RBP11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 RPS23P62266 143 aaKnown RBP11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 RHEBQ15382 184 aa11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 ZNF343Q6P1L6 599 aa11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 RAB39BQ96DA2 213 aa11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 ATP5SQ99766 215 aa11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 OR2J1Q9GZK6 312 aa11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 RIMS4Q9H426 269 aaPredicted RBP11.94□□□□□ -0.5
ATP2C1-201ENST00000328560 PLK3Q9H4B4 646 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms