RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.63□□□□□ -1.03
COL12A1-201ENST00000322507 ZNF646O15015 1829 aaPredicted RBP8.63□□□□□ -1.03
COL12A1-201ENST00000322507 C7orf71A4D174 169 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 GCSAMLQ5JQS6 135 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 C16orf82Q7Z2V1 217 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 PHF7Q9BWX1 381 aaPredicted RBP8.63□□□□□ -1.03
COL12A1-201ENST00000322507 LAMTOR3Q9UHA4 124 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 DEFB103AP81534 67 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 SRSF6Q13247 344 aaKnown RBP8.63□□□□□ -1.03
COL12A1-201ENST00000322507 C19orf54Q5BKX5 351 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 CADM4Q8NFZ8 388 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 OR52N4Q8NGI2 321 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 CLDN23Q96B33 292 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 TAAR3PQ9P1P4 343 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 KCNE1BA0A087WTH5 132 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 TMPRSS11DO60235 418 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 C9orf62Q8N4C0 152 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 ANKRD29Q8N6D5 301 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 KISS1RQ969F8 398 aaPredicted RBP8.62□□□□□ -1.03
COL12A1-201ENST00000322507 PRRX2Q99811 253 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 STRCP1A6NGW2 1772 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 Q7L0L9 218 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 MS4A18H0YCH9 400 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 NDUFB6O95139 128 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 MS4A18Q3C1V0 323 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 DLK2Q6UY11 383 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 NUBPLQ8TB37 319 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 LAMTOR2Q9Y2Q5 125 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 ZNF324BQ6AW86 544 aaPredicted RBP8.62□□□□□ -1.03
COL12A1-201ENST00000322507 LINC01465Q8N7H1 131 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 MARCH1Q8TCQ1 289 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 DOK1Q99704 481 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 ZMAT3Q9HA38 289 aaKnown RBP8.62□□□□□ -1.03
COL12A1-201ENST00000322507 CXorf1O96002 111 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 FAM157CP0CG43 387 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 ORM2P19652 201 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 MRPL58Q14197 206 aaKnown RBP8.62□□□□□ -1.03
COL12A1-201ENST00000322507 C16orf52Q8NHV5 167 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 MS4A4AQ96JQ5 239 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 PLA2G12AQ9BZM1 189 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 KCNE5Q9UJ90 142 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 CCL26Q9Y258 94 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 DGCR2P98153 550 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 HFEQ30201 348 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 LSM10Q969L4 123 aaKnown RBP8.62□□□□□ -1.03
COL12A1-201ENST00000322507 RNF167Q9H6Y7 350 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 A0A0A6YYD5 115 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 TRAV39A0A0B4J263 110 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 RGS7BPQ6MZT1 257 aaPredicted RBP8.62□□□□□ -1.03
COL12A1-201ENST00000322507 A0A087WUJ7 227 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 FAM157AC9JC47 383 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 GPANK1O95872 356 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 CEACAM3P40198 252 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 HERPUD1Q15011 391 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 Q6ZPB1 254 aaPredicted RBP8.62□□□□□ -1.03
COL12A1-201ENST00000322507 BOD1L2Q8IYS8 172 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 SPEM1Q8N4L4 309 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 OR10AD1Q8NGE0 317 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 PIK3IP1Q96FE7 263 aa8.62□□□□□ -1.03
COL12A1-201ENST00000322507 FREM1Q5H8C1 2179 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 MRGPRX3Q96LB0 322 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 AUP1Q9Y679 476 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 TCRBV5S2A0A599 114 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 PNKDQ8N490 385 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 AQP10Q96PS8 301 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 GCM2O75603 506 aaPredicted RBP8.61□□□□□ -1.03
COL12A1-201ENST00000322507 SLCO1C1Q9NYB5 712 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 LOC105371267A0A1B0GV96 52 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 IFITM1P13164 125 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 PPIAP62937 165 aaKnown RBP8.61□□□□□ -1.03
COL12A1-201ENST00000322507 MPV17LQ2QL34 196 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 OR1K1Q8NGR3 316 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 OR1N1Q8NGS0 311 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 TAF1LQ8IZX4 1826 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 XIRP1Q702N8 1843 aaKnown RBP8.61□□□□□ -1.03
COL12A1-201ENST00000322507 A0A0G2JMM0 328 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 A0A1W2PPB8 328 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 LINC01553A4QN01 128 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 KIR3DP1A8MWS1 328 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 OR10J3Q5JRS4 329 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 SCN10AQ9Y5Y9 1956 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 PCSK6P29122 969 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 GPNMBQ14956 572 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 HMGCLL1Q8TB92 370 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 CGGBP1Q9UFW8 167 aaPredicted RBP8.61□□□□□ -1.03
COL12A1-201ENST00000322507 RRHO14718 337 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 MPC2O95563 127 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 FABP5Q01469 135 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 KLF12Q9Y4X4 402 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 TRAV17A0A0B4J275 112 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 DPRXA6NFQ7 191 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 ASCL5Q7RTU5 278 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 TMEFF1Q8IYR6 380 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 TEX37Q96LM6 180 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 TBC1D29Q9UFV1 150 aa8.61□□□□□ -1.03
COL12A1-201ENST00000322507 COL24A1Q17RW2 1714 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 DPM2O94777 84 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 ZNF121P58317 390 aaPredicted RBP8.6□□□□□ -1.03
COL12A1-201ENST00000322507 DYNLRB2Q8TF09 96 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms