RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 CTDSP1Q9GZU7 261 aa14.28□□□□□ -0.12
CLIP4-201ENST00000320081 SLC26A1Q9H2B4 701 aa14.28□□□□□ -0.12
CLIP4-201ENST00000320081 FAM90A27PA6NNH2 459 aa14.27□□□□□ -0.12
CLIP4-201ENST00000320081 ZNF737O75373 536 aa14.27□□□□□ -0.12
CLIP4-201ENST00000320081 PCOLCEQ15113 449 aa14.27□□□□□ -0.12
CLIP4-201ENST00000320081 UQCC3Q6UW78 93 aa14.27□□□□□ -0.12
CLIP4-201ENST00000320081 COMMD1Q8N668 190 aa14.27□□□□□ -0.12
CLIP4-201ENST00000320081 SNX22Q96L94 193 aa14.27□□□□□ -0.12
CLIP4-201ENST00000320081 ALX4Q9H161 411 aaPredicted RBP14.27□□□□□ -0.12
CLIP4-201ENST00000320081 ZDHHC11Q9H8X9 412 aa14.27□□□□□ -0.12
CLIP4-201ENST00000320081 F6UZH7 168 aa14.27□□□□□ -0.12
CLIP4-201ENST00000320081 FSTP19883 344 aa14.27□□□□□ -0.12
CLIP4-201ENST00000320081 TMEM50BP56557 158 aa14.27□□□□□ -0.12
CLIP4-201ENST00000320081 ZP4Q12836 540 aa14.27□□□□□ -0.12
CLIP4-201ENST00000320081 TIGITQ495A1 244 aa14.27□□□□□ -0.12
CLIP4-201ENST00000320081 GFI1Q99684 422 aa14.27□□□□□ -0.12
CLIP4-201ENST00000320081 IL36RNQ9UBH0 155 aa14.27□□□□□ -0.12
CLIP4-201ENST00000320081 GTF3C1Q12789 2109 aa14.27□□□□□ -0.13
CLIP4-201ENST00000320081 FBP1P09467 338 aa14.27□□□□□ -0.13
CLIP4-201ENST00000320081 MOB3BQ86TA1 216 aa14.27□□□□□ -0.13
CLIP4-201ENST00000320081 CISD2Q8N5K1 135 aaKnown RBP14.27□□□□□ -0.13
CLIP4-201ENST00000320081 OR10G4Q8NGN3 311 aa14.27□□□□□ -0.13
CLIP4-201ENST00000320081 OR10G9Q8NGN4 311 aa14.27□□□□□ -0.13
CLIP4-201ENST00000320081 OR10G7Q8NGN6 311 aa14.27□□□□□ -0.13
CLIP4-201ENST00000320081 LEAP2Q969E1 77 aa14.27□□□□□ -0.13
CLIP4-201ENST00000320081 ERVFC1-1P60608 527 aa14.27□□□□□ -0.13
CLIP4-201ENST00000320081 UBE2G1P62253 170 aa14.27□□□□□ -0.13
CLIP4-201ENST00000320081 IL13RA2Q14627 380 aa14.27□□□□□ -0.13
CLIP4-201ENST00000320081 PIPOXQ9P0Z9 390 aa14.27□□□□□ -0.13
CLIP4-201ENST00000320081 NUDT19A8MXV4 375 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 HOXD4P09016 255 aaPredicted RBP14.26□□□□□ -0.13
CLIP4-201ENST00000320081 SULT1A1P50225 295 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 AQP3Q92482 292 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 NRIP2Q9BQI9 281 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 ARFGEF3Q5TH69 2177 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 TMEM265A0A087WTH1 108 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 OR5B21A6NL26 309 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 HAND1O96004 215 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 OR52L2PQ8NGH6 319 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 ASB13Q8WXK3 278 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 DNASE2BQ8WZ79 361 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 BORCS7Q96B45 105 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 TXN2Q99757 166 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 TOLLIPQ9H0E2 274 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 IGKV3D-11A0A0A0MRZ8 115 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 LY86O95711 162 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 TEX30Q5JUR7 227 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 SLC25A28Q96A46 364 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 RAB40CQ96S21 281 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 GNB4Q9HAV0 340 aa14.26□□□□□ -0.13
CLIP4-201ENST00000320081 ZGRF1Q86YA3 2104 aa14.25□□□□□ -0.13
CLIP4-201ENST00000320081 COX6A1P12074 109 aa14.25□□□□□ -0.13
CLIP4-201ENST00000320081 USB1Q9BQ65 265 aaKnown RBP14.25□□□□□ -0.13
CLIP4-201ENST00000320081 SUCLG1P53597 346 aaKnown RBP14.25□□□□□ -0.13
CLIP4-201ENST00000320081 FBXW9Q5XUX1 488 aa14.25□□□□□ -0.13
CLIP4-201ENST00000320081 TMEM252Q8N6L7 170 aa14.25□□□□□ -0.13
CLIP4-201ENST00000320081 CYB561D1Q8N8Q1 229 aa14.25□□□□□ -0.13
CLIP4-201ENST00000320081 FAM210BQ96KR6 192 aa14.25□□□□□ -0.13
CLIP4-201ENST00000320081 M0R296 226 aa14.25□□□□□ -0.13
CLIP4-201ENST00000320081 WISP1O95388 367 aa14.25□□□□□ -0.13
CLIP4-201ENST00000320081 SP1P08047 785 aa14.25□□□□□ -0.13
CLIP4-201ENST00000320081 EFNB1P98172 346 aa14.25□□□□□ -0.13
CLIP4-201ENST00000320081 RTL8BQ17RB0 113 aa14.25□□□□□ -0.13
CLIP4-201ENST00000320081 CALHM1Q8IU99 346 aa14.25□□□□□ -0.13
CLIP4-201ENST00000320081 BLNKQ8WV28 456 aa14.25□□□□□ -0.13
CLIP4-201ENST00000320081 NTNG2Q96CW9 530 aa14.25□□□□□ -0.13
CLIP4-201ENST00000320081 ZNF665Q9H7R5 613 aa14.25□□□□□ -0.13
CLIP4-201ENST00000320081 KRTDAPP60985 99 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 TNFAIP6P98066 277 aaPredicted RBP14.24□□□□□ -0.13
CLIP4-201ENST00000320081 NHLRC3Q5JS37 347 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 CIB3Q96Q77 187 aaPredicted RBP14.24□□□□□ -0.13
CLIP4-201ENST00000320081 ANGPTL4Q9BY76 406 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 OR2W1Q9Y3N9 320 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 MPC1Q9Y5U8 109 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 DLK1P80370 383 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 NUFIP2Q7Z417 695 aaKnown RBP14.24□□□□□ -0.13
CLIP4-201ENST00000320081 C5orf24Q7Z6I8 188 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 LRRC75AQ8NAA5 344 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 OR5B3Q8NH48 314 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 SIGLEC12Q96PQ1 595 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 ZNF552Q9H707 407 aaPredicted RBP14.24□□□□□ -0.13
CLIP4-201ENST00000320081 WDR54Q9H977 334 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 ZNF331Q9NQX6 463 aaPredicted RBP14.24□□□□□ -0.13
CLIP4-201ENST00000320081 IL36GQ9NZH8 169 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 LRRK1Q38SD2 2015 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 CLDN34H7C241 214 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 IGHV3-48P01763 117 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 LINC00114Q6XXX2 140 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 PILRBQ9UKJ0 227 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 CLN5O75503 358 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 ISG15P05161 165 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 SLC35B1P78383 322 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 PHYHD1Q5SRE7 291 aa14.24□□□□□ -0.13
CLIP4-201ENST00000320081 C5orf63A6NC05 138 aa14.23□□□□□ -0.13
CLIP4-201ENST00000320081 TMEM14DPA8MWL7 114 aa14.23□□□□□ -0.13
CLIP4-201ENST00000320081 OPRK1P41145 380 aa14.23□□□□□ -0.13
CLIP4-201ENST00000320081 ERHP84090 104 aaKnown RBP14.23□□□□□ -0.13
CLIP4-201ENST00000320081 CHCHD2Q9Y6H1 151 aaPredicted RBP14.23□□□□□ -0.13
CLIP4-201ENST00000320081 BRCA2P51587 3418 aa14.23□□□□□ -0.13
CLIP4-201ENST00000320081 WDR90Q96KV7 1748 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms