RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 OR51H1Q8NH63 302 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 TMEM56Q96MV1 263 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 TAF9BQ9HBM6 251 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 TUBG2Q9NRH3 451 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 NSG2Q9Y328 171 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 TMEM56-RWDD3S4R434 201 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 TAAR5O14804 337 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 CRYAAP02489 173 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 TIMP3P35625 211 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 RND3P61587 244 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 AESQ08117 197 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 KRTCAP3Q53RY4 240 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 TIMM23BQ5SRD1 257 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 MBNL2Q5VZF2 373 aaKnown RBP6.39□□□□□ -1.39
IFT88-201ENST00000319980 LRP11Q86VZ4 500 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 SELENOHQ8IZQ5 122 aaKnown RBP6.39□□□□□ -1.39
IFT88-201ENST00000319980 OR2Z1Q8NG97 314 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 OR1S2Q8NGQ3 325 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 RNF141Q8WVD5 230 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 MUCL1Q96DR8 90 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 CABLES2Q9BTV7 478 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 SCNM1Q9BWG6 230 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 HES4Q9HCC6 221 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 ASF1BQ9NVP2 202 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 FBXL17Q9UF56 701 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 TP53TG5Q9Y2B4 290 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 ADAM20O43506 726 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 ZP3P21754 424 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 S100GP29377 79 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 FAM27E3Q08E93 113 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 GNMTQ14749 295 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 MSMPQ1L6U9 139 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 CISD2Q8N5K1 135 aaKnown RBP6.38□□□□□ -1.39
IFT88-201ENST00000319980 OR10V1Q8NGI7 309 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 LILRB1Q8NHL6 650 aaPredicted RBP6.38□□□□□ -1.39
IFT88-201ENST00000319980 ERGIC1Q969X5 290 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 DNTTIP1Q9H147 329 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 PLEKHA2Q9HB19 425 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 COQ3Q9NZJ6 369 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 GLS2Q9UI32 602 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 MEX3AA1L020 520 aaKnown RBP6.38□□□□□ -1.39
IFT88-201ENST00000319980 ZNF705EA8MWA4 302 aaPredicted RBP6.38□□□□□ -1.39
IFT88-201ENST00000319980 KRBOX1C9JBD0 128 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 PTBP3O95758 552 aaKnown RBP6.38□□□□□ -1.39
IFT88-201ENST00000319980 ACAA1P09110 424 aaPredicted RBP6.38□□□□□ -1.39
IFT88-201ENST00000319980 OR8U9P0C7N5 309 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 F2RP25116 425 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 UCP1P25874 307 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 CEACAM6P40199 344 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 TESK1Q15569 626 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 EIF2S3LQ2VIR3 472 aaKnown RBP6.38□□□□□ -1.39
IFT88-201ENST00000319980 SHEQ5VZ18 495 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 ACP7Q6ZNF0 438 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 MOB1BQ7L9L4 216 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 STPG2Q8N412 459 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 EIF4E3Q8N5X7 224 aaKnown RBP6.38□□□□□ -1.39
IFT88-201ENST00000319980 OR4D5Q8NGN0 318 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 OR8U1Q8NH10 309 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 FAM57AQ8TBR7 257 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 PARP12Q9H0J9 701 aaKnown RBP6.38□□□□□ -1.39
IFT88-201ENST00000319980 ZFP57Q9NU63 452 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 MBNL3Q9NUK0 354 aaKnown RBP6.38□□□□□ -1.39
IFT88-201ENST00000319980 PPP1R3CQ9UQK1 317 aa6.38□□□□□ -1.39
IFT88-201ENST00000319980 SPTBN4Q9H254 2564 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 ZSCAN5BA6NJL1 495 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 JTBO76095 146 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 NXPH3O95157 252 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 SERPINE2P07093 398 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 FAM157CP0CG43 387 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 VDAC1P21796 283 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 NKX2-1P43699 371 aaPredicted RBP6.37□□□□□ -1.39
IFT88-201ENST00000319980 GABRA2P47869 451 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 POLR2GP62487 172 aaKnown RBP eCLIP6.37□□□□□ -1.39
IFT88-201ENST00000319980 EIF5AP63241 154 aaKnown RBP6.37□□□□□ -1.39
IFT88-201ENST00000319980 NHLH2Q02577 135 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 CXorf66Q5JRM2 361 aaPredicted RBP6.37□□□□□ -1.39
IFT88-201ENST00000319980 UNQ6494/PRO21346Q6UXR6 183 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 C22orf34Q6ZV56 151 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 SPACA3Q8IXA5 215 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 TPRX1Q8N7U7 411 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.37□□□□□ -1.39
IFT88-201ENST00000319980 BSCL2Q96G97 398 aaPredicted RBP6.37□□□□□ -1.39
IFT88-201ENST00000319980 NARS2Q96I59 477 aaKnown RBP6.37□□□□□ -1.39
IFT88-201ENST00000319980 MAGT1Q9H0U3 335 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 SH3BGRL2Q9UJC5 107 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 KCNS2Q9ULS6 477 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 RCL1Q9Y2P8 373 aaKnown RBP6.37□□□□□ -1.39
IFT88-201ENST00000319980 WIPI2Q9Y4P8 454 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 ADGRG4Q8IZF6 3080 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 TMEM30CPA0ZSE6 113 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 A8MXE2 369 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 C1QTNF9BB2RNN3 333 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 H0Y980 276 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 FGF16O43320 207 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 HEXAP06865 529 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 PSG2P11465 335 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 LMO1P25800 156 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 OR3A1P47881 315 aa6.37□□□□□ -1.39
IFT88-201ENST00000319980 EIF5AL1Q6IS14 154 aaKnown RBP6.37□□□□□ -1.39
IFT88-201ENST00000319980 C1orf174Q8IYL3 243 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms