RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 PPIL3Q9H2H8 161 aaKnown RBP11.23□□□□□ -0.61
RPP40-201ENST00000319533 ZMAT5Q9UDW3 170 aaKnown RBP11.23□□□□□ -0.61
RPP40-201ENST00000319533 AMMECR1Q9Y4X0 333 aaPredicted RBP11.23□□□□□ -0.61
RPP40-201ENST00000319533 TRBV5-7A0A0A0MS05 114 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 A0A1W2PPK0 400 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 NPIPB11E5RHQ5 1161 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 ZNF780AO75290 641 aaPredicted RBP11.22□□□□□ -0.61
RPP40-201ENST00000319533 CDRT1O95170 752 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 IGHG2P01859 326 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 RBM39Q14498 530 aaKnown RBP11.22□□□□□ -0.61
RPP40-201ENST00000319533 ATXN7L3Q14CW9 347 aaPredicted RBP11.22□□□□□ -0.61
RPP40-201ENST00000319533 SPHARQ15513 63 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 MED22Q15528 200 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 PAN3Q58A45 887 aaKnown RBP11.22□□□□□ -0.61
RPP40-201ENST00000319533 UBE2UQ5VVX9 321 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 ASCL4Q6XD76 172 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 SLC16A12Q6ZSM3 486 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 C8orf86Q6ZUL3 223 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 OR8H3Q8N146 312 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 SVOPQ8N4V2 548 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 JAGN1Q8N5M9 183 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 MS4A15Q8N5U1 240 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 ZNF565Q8N9K5 539 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 OR10K1Q8NGX5 313 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 OR56B4Q8NH76 319 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 ORAI1Q96D31 301 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 NOL4LQ96MY1 436 aaPredicted RBP11.22□□□□□ -0.61
RPP40-201ENST00000319533 DERL3Q96Q80 235 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 CALYQ9NYX4 217 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 IL36GQ9NZH8 169 aa11.22□□□□□ -0.61
RPP40-201ENST00000319533 TRAV8-7A0A075B6U6 113 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 HSPB6O14558 160 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 IL1AP01583 271 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 NHLRC4P0CG21 123 aaPredicted RBP11.21□□□□□ -0.61
RPP40-201ENST00000319533 TMEM11P17152 192 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 SERPINA2P20848 420 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 NFYBP25208 207 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 KCNJ3P48549 501 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 RAB7AP51149 207 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 MADCAM1Q13477 382 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 EBI3Q14213 229 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 DIAPH2-AS1Q14236 149 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 GPR176Q14439 515 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 PIGYQ3MUY2 71 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 UNQ9370/PRO34162Q6UXP9 181 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 DRAM1Q8N682 238 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 NKAIN3Q8N8D7 197 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 Q8NFD4 153 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 OR10A7Q8NGE5 316 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 OR13A1Q8NGR1 328 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 ING3Q9NXR8 418 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 IDI2-AS1Q9NZ38 188 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 PSG11Q9UQ72 335 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 ST3GAL6Q9Y274 331 aa11.21□□□□□ -0.61
RPP40-201ENST00000319533 TRAV24A0A0B4J272 114 aa11.2□□□□□ -0.62
RPP40-201ENST00000319533 DPPA5A6NC42 116 aa11.2□□□□□ -0.62
RPP40-201ENST00000319533 SERPINE3A8MV23 424 aa11.2□□□□□ -0.62
RPP40-201ENST00000319533 RAMP3O60896 148 aa11.2□□□□□ -0.62
RPP40-201ENST00000319533 OR7C1O76099 320 aaPredicted RBP11.2□□□□□ -0.62
RPP40-201ENST00000319533 MAS1P04201 325 aa11.2□□□□□ -0.62
RPP40-201ENST00000319533 RPL5P46777 297 aaKnown RBP11.2□□□□□ -0.62
RPP40-201ENST00000319533 DGCR2P98153 550 aa11.2□□□□□ -0.62
RPP40-201ENST00000319533 SLC22A6Q4U2R8 563 aa11.2□□□□□ -0.62
RPP40-201ENST00000319533 NHLRC3Q5JS37 347 aa11.2□□□□□ -0.62
RPP40-201ENST00000319533 AWAT2Q6E213 333 aa11.2□□□□□ -0.62
RPP40-201ENST00000319533 LINC00596Q86U02 117 aa11.2□□□□□ -0.62
RPP40-201ENST00000319533 ZNF695Q8IW36 515 aa11.2□□□□□ -0.62
RPP40-201ENST00000319533 CDH26Q8IXH8 852 aa11.2□□□□□ -0.62
RPP40-201ENST00000319533 STPG2Q8N412 459 aa11.2□□□□□ -0.62
RPP40-201ENST00000319533 UFD1Q92890 307 aa11.2□□□□□ -0.62
RPP40-201ENST00000319533 TMED9Q9BVK6 235 aa11.2□□□□□ -0.62
RPP40-201ENST00000319533 BARHL1Q9BZE3 327 aa11.2□□□□□ -0.62
RPP40-201ENST00000319533 KIF25Q9UIL4 384 aa11.2□□□□□ -0.62
RPP40-201ENST00000319533 MRPS28Q9Y2Q9 187 aaKnown RBP11.2□□□□□ -0.62
RPP40-201ENST00000319533 HUWE1Q7Z6Z7 4374 aaKnown RBP11.2□□□□□ -0.62
RPP40-201ENST00000319533 DYNC2H1Q8NCM8 4307 aaKnown RBP11.2□□□□□ -0.62
RPP40-201ENST00000319533 MEIKINA0A087WXM9 373 aa11.19□□□□□ -0.62
RPP40-201ENST00000319533 GTF2F2P13984 249 aa11.19□□□□□ -0.62
RPP40-201ENST00000319533 GLP1RP43220 463 aa11.19□□□□□ -0.62
RPP40-201ENST00000319533 RBM11P57052 281 aaKnown RBP11.19□□□□□ -0.62
RPP40-201ENST00000319533 SLC35B1P78383 322 aa11.19□□□□□ -0.62
RPP40-201ENST00000319533 PRR20EP86478 221 aa11.19□□□□□ -0.62
RPP40-201ENST00000319533 PRR20CP86479 221 aa11.19□□□□□ -0.62
RPP40-201ENST00000319533 PRR20DP86480 221 aa11.19□□□□□ -0.62
RPP40-201ENST00000319533 PRR20BP86481 221 aa11.19□□□□□ -0.62
RPP40-201ENST00000319533 PRR20AP86496 221 aa11.19□□□□□ -0.62
RPP40-201ENST00000319533 ZNF816Q0VGE8 651 aaPredicted RBP11.19□□□□□ -0.62
RPP40-201ENST00000319533 GPR50Q13585 617 aa11.19□□□□□ -0.62
RPP40-201ENST00000319533 MPV17LQ2QL34 196 aa11.19□□□□□ -0.62
RPP40-201ENST00000319533 ACSM3Q53FZ2 586 aa11.19□□□□□ -0.62
RPP40-201ENST00000319533 RSBN1Q5VWQ0 802 aaPredicted RBP11.19□□□□□ -0.62
RPP40-201ENST00000319533 ZNF367Q7RTV3 350 aa11.19□□□□□ -0.62
RPP40-201ENST00000319533 SLC35E3Q7Z769 313 aa11.19□□□□□ -0.62
RPP40-201ENST00000319533 RNF152Q8N8N0 203 aa11.19□□□□□ -0.62
RPP40-201ENST00000319533 KLHL30-AS1Q8NEE0 82 aa11.19□□□□□ -0.62
RPP40-201ENST00000319533 OR13F1Q8NGS4 319 aa11.19□□□□□ -0.62
RPP40-201ENST00000319533 LEAP2Q969E1 77 aa11.19□□□□□ -0.62
RPP40-201ENST00000319533 RAX2Q96IS3 184 aa11.19□□□□□ -0.62
RPP40-201ENST00000319533 LSM4Q9Y4Z0 139 aaKnown RBP11.19□□□□□ -0.62
RPP40-201ENST00000319533 STAB2Q8WWQ8 2551 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms