RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 NCKAP5O14513 1909 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 TCAPO15273 167 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 CXCL13O43927 109 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 MRPS21P82921 87 aaKnown RBP8.23□□□□□ -1.09
RPGR-201ENST00000318842 CEACAM16Q2WEN9 425 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 NCR3LG1Q68D85 454 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 TEX38Q6PEX7 206 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 TMEM256Q8N2U0 113 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 COMMD1Q8N668 190 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 GPR146Q96CH1 333 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 RCC1LQ96I51 464 aaKnown RBP8.23□□□□□ -1.09
RPGR-201ENST00000318842 MRGPRX4Q96LA9 322 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 HIST1H2AAQ96QV6 131 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 NEU1Q99519 415 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 CHCHD2Q9Y6H1 151 aaPredicted RBP8.23□□□□□ -1.09
RPGR-201ENST00000318842 TMEM238LA0A1B0GVL6 79 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 A0A1W2PR77 199 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 LILRA5A6NI73 299 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 LMO7DNF2Z398 122 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 TCN2P20062 427 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 IL13RA2Q14627 380 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 COL13A1Q5TAT6 717 aaPredicted RBP8.23□□□□□ -1.09
RPGR-201ENST00000318842 CST9LP1Q5W188 147 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 REC114Q7Z4M0 266 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 OR56B2PQ8NGI1 322 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 OR10V1Q8NGI7 309 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 IFI44Q8TCB0 444 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 GPR87Q9BY21 358 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 MOB1AQ9H8S9 216 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 PLEKHF2Q9H8W4 249 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 KIAA1456Q9P272 454 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 KCNS2Q9ULS6 477 aa8.23□□□□□ -1.09
RPGR-201ENST00000318842 STRAPQ9Y3F4 350 aaKnown RBP8.23□□□□□ -1.09
RPGR-201ENST00000318842 SPTBN2O15020 2390 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 EXPH5Q8NEV8 1989 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 DUX1O43812 170 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 WDR1O75083 606 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 PIAS2O75928 621 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 IDH3GP51553 393 aaPredicted RBP8.22□□□□□ -1.09
RPGR-201ENST00000318842 SUCLG1P53597 346 aaKnown RBP8.22□□□□□ -1.09
RPGR-201ENST00000318842 RAB4BP61018 213 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 HIST3H3Q16695 136 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 C1orf87Q8N0U7 546 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 SPACA9Q96E40 222 aaPredicted RBP8.22□□□□□ -1.09
RPGR-201ENST00000318842 SMIM7Q9BQ49 75 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 C11orf1Q9H5F2 150 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 Q9N2K0 584 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 LOC102723971A0A1B0GUV8 181 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 C9J4A7 227 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 TSTD3H0UI37 97 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 SPINK4O60575 86 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 PITX3O75364 302 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 RHBDL1O75783 438 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 PMELP40967 661 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 RBM11P57052 281 aaKnown RBP8.22□□□□□ -1.09
RPGR-201ENST00000318842 WIPI1Q5MNZ9 446 aaPredicted RBP8.22□□□□□ -1.09
RPGR-201ENST00000318842 ZNF808Q8N4W9 903 aaPredicted RBP8.22□□□□□ -1.09
RPGR-201ENST00000318842 PP6455Q8WZ26 134 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 ZNF552Q9H707 407 aaPredicted RBP8.22□□□□□ -1.09
RPGR-201ENST00000318842 IL17BQ9UHF5 180 aa8.22□□□□□ -1.09
RPGR-201ENST00000318842 RBM7Q9Y580 266 aaKnown RBP8.22□□□□□ -1.09
RPGR-201ENST00000318842 BLACEA4D250 179 aa8.21□□□□□ -1.09
RPGR-201ENST00000318842 PDCD6O75340 191 aa8.21□□□□□ -1.09
RPGR-201ENST00000318842 PTBP3O95758 552 aaKnown RBP8.21□□□□□ -1.09
RPGR-201ENST00000318842 IGKV1-39P01597 117 aa8.21□□□□□ -1.09
RPGR-201ENST00000318842 IGKV1D-39P04432 117 aa8.21□□□□□ -1.09
RPGR-201ENST00000318842 IGFBP4P22692 258 aa8.21□□□□□ -1.09
RPGR-201ENST00000318842 ZNF266Q14584 549 aa8.21□□□□□ -1.09
RPGR-201ENST00000318842 FBXO46Q6PJ61 603 aaPredicted RBP8.21□□□□□ -1.09
RPGR-201ENST00000318842 PLXDC1Q8IUK5 500 aa8.21□□□□□ -1.09
RPGR-201ENST00000318842 ADPRHL1Q8NDY3 354 aa8.21□□□□□ -1.09
RPGR-201ENST00000318842 LURAP1Q96LR2 239 aa8.21□□□□□ -1.09
RPGR-201ENST00000318842 GPR27Q9NS67 375 aa8.21□□□□□ -1.09
RPGR-201ENST00000318842 DKKL1Q9UK85 242 aa8.21□□□□□ -1.09
RPGR-201ENST00000318842 ATP23Q9Y6H3 246 aa8.21□□□□□ -1.09
RPGR-201ENST00000318842 A0A1W2PQM1 296 aa8.21□□□□□ -1.1
RPGR-201ENST00000318842 RRP8O43159 456 aaKnown RBP8.21□□□□□ -1.1
RPGR-201ENST00000318842 ZIC3O60481 467 aa8.21□□□□□ -1.1
RPGR-201ENST00000318842 TUSC2O75896 110 aa8.21□□□□□ -1.1
RPGR-201ENST00000318842 IGLV3-1P01715 115 aa8.21□□□□□ -1.1
RPGR-201ENST00000318842 RPL29P47914 159 aaKnown RBP8.21□□□□□ -1.1
RPGR-201ENST00000318842 TFPI2P48307 235 aa8.21□□□□□ -1.1
RPGR-201ENST00000318842 ZNF133P52736 654 aaPredicted RBP8.21□□□□□ -1.1
RPGR-201ENST00000318842 RAB1AP62820 205 aa8.21□□□□□ -1.1
RPGR-201ENST00000318842 EIF3IQ13347 325 aaKnown RBP8.21□□□□□ -1.1
RPGR-201ENST00000318842 ZNF506Q5JVG8 444 aa8.21□□□□□ -1.1
RPGR-201ENST00000318842 Q6ZVH6 145 aa8.21□□□□□ -1.1
RPGR-201ENST00000318842 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.21□□□□□ -1.1
RPGR-201ENST00000318842 C1QL4Q86Z23 238 aa8.21□□□□□ -1.1
RPGR-201ENST00000318842 MRPL41Q8IXM3 137 aaKnown RBP8.21□□□□□ -1.1
RPGR-201ENST00000318842 OR1F12Q8NHA8 337 aa8.21□□□□□ -1.1
RPGR-201ENST00000318842 SPTSSAQ969W0 71 aa8.21□□□□□ -1.1
RPGR-201ENST00000318842 SDSLQ96GA7 329 aa8.21□□□□□ -1.1
RPGR-201ENST00000318842 IMMP2LQ96T52 175 aa8.21□□□□□ -1.1
RPGR-201ENST00000318842 NUDT16L1Q9BRJ7 211 aaKnown RBP8.21□□□□□ -1.1
RPGR-201ENST00000318842 SNHG12Q9BXW3 62 aa8.21□□□□□ -1.1
RPGR-201ENST00000318842 BCO1Q9HAY6 547 aa8.21□□□□□ -1.1
RPGR-201ENST00000318842 MTCH1Q9NZJ7 389 aa8.21□□□□□ -1.1
RPGR-201ENST00000318842 POLEQ07864 2286 aa8.21□□□□□ -1.1
RPGR-201ENST00000318842 CADP27708 2225 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms