RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 HERV-K104P61576 105 aa5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 TMEM187Q14656 261 aa5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 FAM189A2Q15884 450 aa5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 IAH1Q2TAA2 248 aaPredicted RBP5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 LILRB1Q8NHL6 650 aaPredicted RBP5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 MSI2Q96DH6 328 aaKnown RBP5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 CCL13Q99616 98 aa5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 TENM4Q6N022 2769 aa5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 SH2D1BO14796 132 aa5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 CA11O75493 328 aa5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 CTSDP07339 412 aaPredicted RBP5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 HOXB1P14653 301 aaPredicted RBP5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 PRDX2P32119 198 aa5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 KCNJ3P48549 501 aa5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 TAGLNQ01995 201 aaKnown RBP5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 C1orf229Q6ZS94 237 aaPredicted RBP5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 CCL17Q92583 94 aa5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 FAM234AQ9H0X4 552 aa5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 NAA60Q9H7X0 242 aa5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 MYOZ1Q9NP98 299 aaPredicted RBP5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 DECR2Q9NUI1 292 aa5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 KCNS2Q9ULS6 477 aa5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 EDARQ9UNE0 448 aa5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 LSM5Q9Y4Y9 91 aaKnown RBP5.85□□□□□ -1.47
LYSMD3-201ENST00000315948 USP9YO00507 2555 aaPredicted RBP5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 RAI1Q7Z5J4 1906 aaPredicted RBP5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 IGLV3-9A0A075B6K5 115 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 SHISA9B4DS77 424 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 ZG16O60844 167 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 RAMP3O60896 148 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 MMP23AO75900 390 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 EPHA1P21709 976 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 LUMP51884 338 aaPredicted RBP5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 KLRB1Q12918 225 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 TMEM268Q5VZI3 342 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 TMEM108Q6UXF1 575 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 SGPP2Q8IWX5 399 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 OR1S1Q8NH92 325 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 OR10J5Q8NHC4 309 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 COQ8AQ8NI60 647 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 IGFBPL1Q8WX77 278 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 DCUN1D4Q92564 292 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 CXorf58Q96LI9 332 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 VRK1Q99986 396 aaPredicted RBP5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 A0A1W2PPR1 153 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 MPPED1O15442 326 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 ST8SIA5O15466 376 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 HLA-DRB3P79483 266 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 TNFAIP6P98066 277 aaPredicted RBP5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 KRBOX4Q5JUW0 171 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 CLEC4MQ9H2X3 399 aaPredicted RBP5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 PLK3Q9H4B4 646 aa5.84□□□□□ -1.47
LYSMD3-201ENST00000315948 A0A0B4J2A0 478 aa5.84□□□□□ -1.48
LYSMD3-201ENST00000315948 ZNF737O75373 536 aa5.84□□□□□ -1.48
LYSMD3-201ENST00000315948 TUSC2O75896 110 aa5.84□□□□□ -1.48
LYSMD3-201ENST00000315948 CD8AP01732 235 aa5.84□□□□□ -1.48
LYSMD3-201ENST00000315948 HBZP02008 142 aa5.84□□□□□ -1.48
LYSMD3-201ENST00000315948 ZMYND11Q15326 602 aa5.84□□□□□ -1.48
LYSMD3-201ENST00000315948 GSG1LQ6UXU4 331 aa5.84□□□□□ -1.48
LYSMD3-201ENST00000315948 VKORC1Q9BQB6 163 aa5.84□□□□□ -1.48
LYSMD3-201ENST00000315948 TLNRD1Q9H1K6 362 aa5.84□□□□□ -1.48
LYSMD3-201ENST00000315948 PCDHB16Q9NRJ7 776 aa5.84□□□□□ -1.48
LYSMD3-201ENST00000315948 SHPKQ9UHJ6 478 aa5.84□□□□□ -1.48
LYSMD3-201ENST00000315948 ZDHHC8Q9ULC8 765 aa5.84□□□□□ -1.48
LYSMD3-201ENST00000315948 WIPI2Q9Y4P8 454 aa5.84□□□□□ -1.48
LYSMD3-201ENST00000315948 RBM7Q9Y580 266 aaKnown RBP5.84□□□□□ -1.48
LYSMD3-201ENST00000315948 DOPEY1Q5JWR5 2465 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 TRBV6-7A0A0A0MS04 114 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 J3QW42 95 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 S100A11P31949 105 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 CA7P43166 264 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 ZNF134P52741 427 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 IL13RA2Q14627 380 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 CXorf66Q5JRM2 361 aaPredicted RBP5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 Q6ZRM9 215 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 GON7Q9BXV9 100 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 SLA2Q9H6Q3 261 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 TNFSF18Q9UNG2 199 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 PTPN13Q12923 2485 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 C3orf85A0A1B0GTC6 90 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 SRRM5B3KS81 715 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 SLC31A2O15432 143 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 PGLYRP1O75594 196 aaPredicted RBP5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 IGKV1-39P01597 117 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 IGKV1D-39P04432 117 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 PSMB6P28072 239 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 RPS16P62249 146 aaKnown RBP5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 RPL30P62888 115 aaKnown RBP5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 ARL6IP1Q15041 203 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 RSRP1Q9BUV0 290 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 OR2S2Q9NQN1 319 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 RPS10-NUDT3A0A1W2PQS6 291 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 MBPP02686 304 aaPredicted RBP5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 TLE1Q04724 770 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 FAHD2BQ6P2I3 314 aaPredicted RBP5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 ZNF880Q6PDB4 577 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 LYPD2Q6UXB3 125 aa5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 H1FOOQ8IZA3 346 aaPredicted RBP5.83□□□□□ -1.48
LYSMD3-201ENST00000315948 LILRB4Q8NHJ6 448 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms