RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 TAF13Q15543 124 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 TBC1D26Q86UD7 250 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 OR4C12Q96R67 309 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 GAL3ST4Q96RP7 486 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 ASF1BQ9NVP2 202 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 NECAP2Q9NVZ3 263 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 WSB1Q9Y6I7 421 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 KANTRA0A1W2PQU2 76 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 INS-IGF2F8WCM5 200 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 ANGPTL7O43827 346 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 NGFP01138 241 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 IGLV2-8P01709 118 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 ZNF718Q3SXZ3 478 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 SPRNQ5BIV9 151 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 SLC35E4Q6ICL7 350 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 FAM185AQ8N0U4 392 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 OR13D1Q8NGV5 346 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 TNFAIP8L1Q8WVP5 186 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 GPR146Q96CH1 333 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 TAS2R3Q9NYW6 316 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 IL17BQ9UHF5 180 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 NOP16Q9Y3C1 178 aaKnown RBP6.51□□□□□ -1.37
CNOT4-201ENST00000315544 RNF114Q9Y508 228 aa6.51□□□□□ -1.37
CNOT4-201ENST00000315544 ZNF729A6NN14 1252 aaPredicted RBP6.5□□□□□ -1.37
CNOT4-201ENST00000315544 IQCF6A8MYZ5 107 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 K7EM74 188 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 SYNGR1O43759 233 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 PSPNO60542 156 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 RHBDL1O75783 438 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 APOC3P02656 99 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 HOXA4Q00056 320 aaPredicted RBP6.5□□□□□ -1.37
CNOT4-201ENST00000315544 GUK1Q16774 197 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 TMEM182Q6ZP80 229 aaPredicted RBP6.5□□□□□ -1.37
CNOT4-201ENST00000315544 Q6ZRG5 221 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 OR10D3Q8NH80 312 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 ABHD3Q8WU67 409 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 RAB1CQ92928 201 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 ARL11Q969Q4 196 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 STRAPQ9Y3F4 350 aaKnown RBP6.5□□□□□ -1.37
CNOT4-201ENST00000315544 LIPGQ9Y5X9 500 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 A6NLC8 198 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 GGCTO75223 188 aaKnown RBP6.5□□□□□ -1.37
CNOT4-201ENST00000315544 YIF1AO95070 293 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 MPIG6BO95866 241 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 GMFBP60983 142 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 PNKDQ8N490 385 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 FAM169BQ8N8A8 192 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 OR2AJ1Q8NGZ0 328 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 RTN4IP1Q8WWV3 396 aaPredicted RBP6.5□□□□□ -1.37
CNOT4-201ENST00000315544 SLC35B3Q9H1N7 401 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 GPR173Q9NS66 373 aa6.5□□□□□ -1.37
CNOT4-201ENST00000315544 NME2P1O60361 137 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 RLN1P04808 185 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 FCGR2AP12318 317 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 NR2C1P13056 603 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 NME2P22392 152 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 MDH2P40926 338 aaKnown RBP6.49□□□□□ -1.37
CNOT4-201ENST00000315544 CDX1P47902 265 aaPredicted RBP6.49□□□□□ -1.37
CNOT4-201ENST00000315544 ACSM6Q6P461 480 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 OR1L1Q8NH94 360 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 C12orf57Q99622 126 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 EHFQ9NZC4 300 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 PRSS50Q9UI38 385 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 A0A1W2PPH5 198 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 F2RP25116 425 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 SFTPDP35247 375 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 SELENOTP62341 195 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 PAX2Q02962 417 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 SP6Q3SY56 376 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 SCGB2B2Q4G0G5 96 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 ACTL10Q5JWF8 245 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 GFI1BQ5VTD9 330 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 LGI3Q8N145 548 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 OR10A7Q8NGE5 316 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 OR51G1Q8NGK1 321 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 OR2V1Q8NHB1 315 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 PLPPR2Q96GM1 343 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 PACRGQ96M98 296 aaPredicted RBP6.49□□□□□ -1.37
CNOT4-201ENST00000315544 FOXB1Q99853 325 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 GGACTQ9BVM4 153 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 ABI3Q9P2A4 366 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 PATE4P0C8F1 98 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 CD46P15529 392 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 DUSP1P28562 367 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 GPX4P36969 197 aaPredicted RBP6.49□□□□□ -1.37
CNOT4-201ENST00000315544 DNASE1L1P49184 302 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 CLRN1P58418 232 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 SSBP2P81877 361 aaPredicted RBP6.49□□□□□ -1.37
CNOT4-201ENST00000315544 C3orf36Q3SXR2 165 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 BRICD5Q6PL45 260 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 OR5A2Q8NGI9 324 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 OR5H2Q8NGV7 314 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 SLC7A5P2Q9GIP4 190 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 KPTNQ9Y664 436 aa6.49□□□□□ -1.37
CNOT4-201ENST00000315544 FAM90A9PA6NNJ1 464 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 C15orf62A8K5M9 175 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 EEF1E1-BLOC1S5C9J1V9 151 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 LCATP04180 440 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 GNALP38405 381 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 MTCP1P56278 107 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms