RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 SIRT7Q9NRC8 400 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 DOK5Q9P104 306 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 OTOFQ9HC10 1997 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 PRF1P14222 555 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 FGF12P61328 243 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 SLC23A3Q6PIS1 610 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 A0A0G2JK05 382 aa11.96□□□□□ -0.49
SPAST-201ENST00000315285 TMEM210A6NLX4 147 aa11.96□□□□□ -0.49
SPAST-201ENST00000315285 FOXC1Q12948 553 aa11.96□□□□□ -0.49
SPAST-201ENST00000315285 PRO1933Q9H354 126 aa11.96□□□□□ -0.49
SPAST-201ENST00000315285 ONECUT1Q9UBC0 465 aa11.96□□□□□ -0.49
SPAST-201ENST00000315285 ELOA3CA0A087WX78 387 aaPredicted RBP11.96□□□□□ -0.49
SPAST-201ENST00000315285 FGF5P12034 268 aa11.96□□□□□ -0.49
SPAST-201ENST00000315285 ANKRD55Q3KP44 614 aa11.96□□□□□ -0.49
SPAST-201ENST00000315285 GMPPAQ96IJ6 420 aaPredicted RBP11.96□□□□□ -0.49
SPAST-201ENST00000315285 MSL2Q9HCI7 577 aa11.96□□□□□ -0.49
SPAST-201ENST00000315285 TMPRSS2O15393 492 aa11.96□□□□□ -0.5
SPAST-201ENST00000315285 OR2A4O95047 310 aa11.96□□□□□ -0.5
SPAST-201ENST00000315285 AESQ08117 197 aa11.96□□□□□ -0.5
SPAST-201ENST00000315285 ZNF273Q14593 569 aa11.96□□□□□ -0.5
SPAST-201ENST00000315285 RPEL1Q2QD12 228 aa11.96□□□□□ -0.5
SPAST-201ENST00000315285 SLC35E3Q7Z769 313 aa11.96□□□□□ -0.5
SPAST-201ENST00000315285 PUSL1Q8N0Z8 303 aaKnown RBP11.96□□□□□ -0.5
SPAST-201ENST00000315285 SSMEM1Q8WWF3 244 aa11.96□□□□□ -0.5
SPAST-201ENST00000315285 ANAPC16Q96DE5 110 aa11.96□□□□□ -0.5
SPAST-201ENST00000315285 OR2A7Q96R45 310 aa11.96□□□□□ -0.5
SPAST-201ENST00000315285 TMEM167BQ9NRX6 74 aa11.96□□□□□ -0.5
SPAST-201ENST00000315285 NCBP2LA6PVI3 153 aaKnown RBP11.96□□□□□ -0.5
SPAST-201ENST00000315285 TMEM229AB2RXF0 380 aa11.96□□□□□ -0.5
SPAST-201ENST00000315285 IGHMP01871 453 aa11.96□□□□□ -0.5
SPAST-201ENST00000315285 UBE2L3P68036 154 aaKnown RBP11.96□□□□□ -0.5
SPAST-201ENST00000315285 RUNX1Q01196 453 aa11.96□□□□□ -0.5
SPAST-201ENST00000315285 TMEM252Q8N6L7 170 aa11.96□□□□□ -0.5
SPAST-201ENST00000315285 VSTM2AQ8TAG5 236 aa11.96□□□□□ -0.5
SPAST-201ENST00000315285 AAMDCQ9H7C9 122 aa11.96□□□□□ -0.5
SPAST-201ENST00000315285 HS3ST3B1Q9Y662 390 aa11.96□□□□□ -0.5
SPAST-201ENST00000315285 NPIPB9F8W1W9 429 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 GATCO43716 136 aaKnown RBP11.95□□□□□ -0.5
SPAST-201ENST00000315285 CD74P04233 296 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 SMIM6P0DI80 62 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 OR10A7Q8NGE5 316 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 TRAV38-1A0A0B4J264 116 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 SIGLEC5O15389 551 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 PAX6P26367 422 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 KHDC3LQ587J8 217 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 NHLRC3Q5JS37 347 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 OR1L4Q8NGR5 311 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 BLNKQ8WV28 456 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 OR10C1Q96KK4 312 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 SNX22Q96L94 193 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 TMEM222Q9H0R3 208 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 C5orf66Q9H5L9 145 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 TECRQ9NZ01 308 aaKnown RBP11.95□□□□□ -0.5
SPAST-201ENST00000315285 PAGE4O60829 102 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 OR4F17Q8NGA8 305 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 OR10G8Q8NGN5 311 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 SEBOXQ9HB31 216 aaPredicted RBP11.95□□□□□ -0.5
SPAST-201ENST00000315285 CTXND1A0A1B0GTU2 59 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 SNAI3Q3KNW1 292 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 SMDT1Q9H4I9 107 aa11.95□□□□□ -0.5
SPAST-201ENST00000315285 NPIPB13A6NJU9 1138 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 TMEM14DPA8MWL7 114 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 NPIPB4C9JG80 1138 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 M0R296 226 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 COX7A1P24310 79 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 AQP10Q96PS8 301 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 WDR61Q9GZS3 305 aaKnown RBP11.94□□□□□ -0.5
SPAST-201ENST00000315285 TRIOBPQ9H2D6 2365 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 NYNRINQ9P2P1 1898 aaKnown RBP11.94□□□□□ -0.5
SPAST-201ENST00000315285 GREB1Q4ZG55 1949 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 TMEM265A0A087WTH1 108 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 A0A1W2PR77 199 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 C1QL1O75973 258 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 SCTP09683 121 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 PPP1CCP36873 323 aaKnown RBP11.94□□□□□ -0.5
SPAST-201ENST00000315285 SSX7Q7RTT5 188 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 FAM122AQ96E09 287 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 RNF24Q9Y225 148 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 LOC102723971A0A1B0GUV8 181 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 FAM74A3Q4VXF1 159 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 RNASEKQ6P5S7 137 aaKnown RBP11.94□□□□□ -0.5
SPAST-201ENST00000315285 DPPA3Q6W0C5 159 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 TMEM251Q8N6I4 163 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 MRPL30Q8TCC3 161 aaKnown RBP11.94□□□□□ -0.5
SPAST-201ENST00000315285 NUDT16L1Q9BRJ7 211 aaKnown RBP11.94□□□□□ -0.5
SPAST-201ENST00000315285 RNF7Q9UBF6 113 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 CHD5Q8TDI0 1954 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 PRRX1P54821 245 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 GABRA6Q16445 453 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 WDR73Q6P4I2 378 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 OR4P4Q8NGL7 312 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 SLC2A8Q9NY64 477 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 TREM2Q9NZC2 230 aa11.94□□□□□ -0.5
SPAST-201ENST00000315285 H0Y980 276 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 HKR1P10072 659 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 ORM2P19652 201 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 HNRNPA3P51991 378 aaKnown RBP11.93□□□□□ -0.5
SPAST-201ENST00000315285 PSG5Q15238 335 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 SMUG1Q53HV7 270 aa11.93□□□□□ -0.5
SPAST-201ENST00000315285 ZNF880Q6PDB4 577 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms