RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 NHLH2Q02577 135 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 GLO1Q04760 184 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 TSPO2Q5TGU0 170 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 OR14K1Q8NGZ2 314 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 ARHGAP5-AS1Q96IT6 56 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 SPACA5Q96QH8 159 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 C14orf166Q9Y224 244 aaKnown RBP10.87□□□□□ -0.67
VANGL1-201ENST00000310260 COA3Q9Y2R0 106 aaPredicted RBP10.87□□□□□ -0.67
VANGL1-201ENST00000310260 NSG2Q9Y328 171 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 LOC102725191A0A1B0GVB3 256 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 A0A1W2PP11 408 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 GPR137BO60478 399 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 HCKP08631 526 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 SRP19P09132 144 aaKnown RBP10.87□□□□□ -0.67
VANGL1-201ENST00000310260 OR3A2P47893 321 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 GLIPR1P48060 266 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 SNU13P55769 128 aaKnown RBP10.87□□□□□ -0.67
VANGL1-201ENST00000310260 JOSD1Q15040 202 aaPredicted RBP10.87□□□□□ -0.67
VANGL1-201ENST00000310260 AKR1C8PQ5T2L2 129 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 CYB5R2Q6BCY4 276 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 ALKBH2Q6NS38 261 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 GLIPR1L1Q6UWM5 242 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 LINC00346Q8IVM7 164 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 GPR137CQ8N3F9 429 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 SLC26A10Q8NG04 563 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 ASB10Q8WXI3 467 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 POM121Q96HA1 1249 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 NOL4LQ96MY1 436 aaPredicted RBP10.87□□□□□ -0.67
VANGL1-201ENST00000310260 ALKBH3Q96Q83 286 aaPredicted RBP10.87□□□□□ -0.67
VANGL1-201ENST00000310260 SFXN3Q9BWM7 321 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 BANF2Q9H503 90 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 SLC7A10Q9NS82 523 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 FAM206AQ9NX38 181 aa10.87□□□□□ -0.67
VANGL1-201ENST00000310260 FOXD3Q9UJU5 478 aaPredicted RBP10.87□□□□□ -0.67
VANGL1-201ENST00000310260 RCL1Q9Y2P8 373 aaKnown RBP10.87□□□□□ -0.67
VANGL1-201ENST00000310260 MRPS28Q9Y2Q9 187 aaKnown RBP10.87□□□□□ -0.67
VANGL1-201ENST00000310260 GCN1Q92616 2671 aaKnown RBP10.86□□□□□ -0.67
VANGL1-201ENST00000310260 XRCC2O43543 280 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 IL18BPO95998 194 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 OR5H8P0DN80 308 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 GZMBP10144 247 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 CHRNB4P30926 498 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 MMP16P51512 607 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 FMODQ06828 376 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 PHYHD1Q5SRE7 291 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 SPSB3Q6PJ21 355 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 ZNF664Q8N3J9 261 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 BEND2Q8NDZ0 799 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 CSNK2A3Q8NEV1 391 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 TMEM59Q9BXS4 323 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 KCNIP3Q9Y2W7 256 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 IGHG1P01857 330 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 OR3A4PP47883 348 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 CSNK1A1P48729 337 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 FOXG1P55316 489 aaPredicted RBP10.86□□□□□ -0.67
VANGL1-201ENST00000310260 RND3P61587 244 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 TNFRSF9Q07011 255 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 ARFRP1Q13795 201 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 GUSBP1Q15486 140 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 SGPP2Q8IWX5 399 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 OR8G5Q8NG78 346 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 ZNF837Q96EG3 531 aaPredicted RBP10.86□□□□□ -0.67
VANGL1-201ENST00000310260 RCC1LQ96I51 464 aaKnown RBP10.86□□□□□ -0.67
VANGL1-201ENST00000310260 SNX22Q96L94 193 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 ST6GALNAC5Q9BVH7 336 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 RBM24Q9BX46 236 aaKnown RBP10.86□□□□□ -0.67
VANGL1-201ENST00000310260 GP6Q9HCN6 339 aa10.86□□□□□ -0.67
VANGL1-201ENST00000310260 CRYM-AS1A6NIL9 109 aa10.85□□□□□ -0.67
VANGL1-201ENST00000310260 IFNA21P01568 189 aa10.85□□□□□ -0.67
VANGL1-201ENST00000310260 IGHMP01871 453 aa10.85□□□□□ -0.67
VANGL1-201ENST00000310260 CEBPGP53567 150 aa10.85□□□□□ -0.67
VANGL1-201ENST00000310260 SLC22A25Q6T423 547 aa10.85□□□□□ -0.67
VANGL1-201ENST00000310260 ZNF429Q86V71 674 aa10.85□□□□□ -0.67
VANGL1-201ENST00000310260 TMEM123Q8N131 208 aa10.85□□□□□ -0.67
VANGL1-201ENST00000310260 CYB561D1Q8N8Q1 229 aa10.85□□□□□ -0.67
VANGL1-201ENST00000310260 RNASEH2CQ8TDP1 164 aaKnown RBP10.85□□□□□ -0.67
VANGL1-201ENST00000310260 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.85□□□□□ -0.67
VANGL1-201ENST00000310260 PLSCR4Q9NRQ2 329 aa10.85□□□□□ -0.67
VANGL1-201ENST00000310260 KIAA1456Q9P272 454 aa10.85□□□□□ -0.67
VANGL1-201ENST00000310260 DVL1O14640 695 aa10.84□□□□□ -0.67
VANGL1-201ENST00000310260 LYZL6O75951 148 aa10.84□□□□□ -0.67
VANGL1-201ENST00000310260 CGAP01215 116 aa10.84□□□□□ -0.67
VANGL1-201ENST00000310260 ICAM4Q14773 271 aa10.84□□□□□ -0.67
VANGL1-201ENST00000310260 FAM189A2Q15884 450 aa10.84□□□□□ -0.67
VANGL1-201ENST00000310260 GPR157Q5UAW9 335 aa10.84□□□□□ -0.67
VANGL1-201ENST00000310260 DEGS2Q6QHC5 323 aa10.84□□□□□ -0.67
VANGL1-201ENST00000310260 ZNF474Q6S9Z5 364 aaPredicted RBP10.84□□□□□ -0.67
VANGL1-201ENST00000310260 C1orf87Q8N0U7 546 aa10.84□□□□□ -0.67
VANGL1-201ENST00000310260 OR5AS1Q8N127 324 aa10.84□□□□□ -0.67
VANGL1-201ENST00000310260 KCNG3Q8TAE7 436 aa10.84□□□□□ -0.67
VANGL1-201ENST00000310260 TMEM45BQ96B21 275 aa10.84□□□□□ -0.67
VANGL1-201ENST00000310260 TVP23CQ96ET8 276 aa10.84□□□□□ -0.67
VANGL1-201ENST00000310260 FAM210BQ96KR6 192 aa10.84□□□□□ -0.67
VANGL1-201ENST00000310260 ULBP2Q9BZM5 246 aa10.84□□□□□ -0.67
VANGL1-201ENST00000310260 METTL9Q9H1A3 318 aa10.84□□□□□ -0.67
VANGL1-201ENST00000310260 A6NIZ1 184 aa10.84□□□□□ -0.67
VANGL1-201ENST00000310260 DIRAS3O95661 229 aa10.84□□□□□ -0.67
VANGL1-201ENST00000310260 PGA4P0DJD7 388 aa10.84□□□□□ -0.67
VANGL1-201ENST00000310260 PGA3P0DJD8 388 aa10.84□□□□□ -0.67
VANGL1-201ENST00000310260 RAP1BP61224 184 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms