RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 MEOX2P50222 304 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 NPY4RP50391 375 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 P2RY4P51582 365 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 ZNF41P51814 821 aaPredicted RBP4.16□□□□□ -1.74
CKS1B-201ENST00000308987 SNU13P55769 128 aaKnown RBP4.16□□□□□ -1.74
CKS1B-201ENST00000308987 BIDP55957 195 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 CLRN1P58418 232 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 CSNK2A1P68400 391 aaPredicted RBP4.16□□□□□ -1.74
CKS1B-201ENST00000308987 HIST1H3AP68431 136 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 NKX6-1P78426 367 aaPredicted RBP4.16□□□□□ -1.74
CKS1B-201ENST00000308987 PDZK1IP1Q13113 114 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 RAB32Q13637 225 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 ARFRP1Q13795 201 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 RBM39Q14498 530 aaKnown RBP4.16□□□□□ -1.74
CKS1B-201ENST00000308987 C21orf62-AS1Q17RA5 79 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 PLPPR5Q32ZL2 321 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 ANKRD55Q3KP44 614 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 FAM76BQ5HYJ3 339 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 PLAC9Q5JTB6 97 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 C10orf128Q5T292 105 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 HIST2H3PS2Q5TEC6 136 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 AADACL3Q5VUY0 350 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 HIST2H3AQ71DI3 136 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 SGPP2Q8IWX5 399 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 ZNF561Q8N587 486 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 FAM71E2Q8N5Q1 922 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 LFNGQ8NES3 379 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 CSNK2A3Q8NEV1 391 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 OR8G5Q8NG78 346 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 OR8B12Q8NGG6 310 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 OR51E1Q8TCB6 317 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 IGFBPL1Q8WX77 278 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 SARAFQ96BY9 339 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 MALSU1Q96EH3 234 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 WDYHV1Q96HA8 205 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 ABHD14BQ96IU4 210 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 ARL5BQ96KC2 179 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 SGCZQ96LD1 299 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 FOXN4Q96NZ1 517 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 GAL3ST1Q99999 423 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 PIGQQ9BRB3 760 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 SUCNR1Q9BXA5 334 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 MS4A5Q9H3V2 200 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 TAF9BQ9HBM6 251 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 GPR84Q9NQS5 396 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 FAM212BQ9NTI7 297 aaPredicted RBP4.16□□□□□ -1.74
CKS1B-201ENST00000308987 MYEF2Q9P2K5 600 aaKnown RBP4.16□□□□□ -1.74
CKS1B-201ENST00000308987 B3GAT1Q9P2W7 334 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 B4GALT7Q9UBV7 327 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 ZNF391Q9UJN7 358 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 POLR1DQ9Y2S0 133 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 KCNIP3Q9Y2W7 256 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 NSG2Q9Y328 171 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 STARD10Q9Y365 291 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 STRAPQ9Y3F4 350 aaKnown RBP4.16□□□□□ -1.74
CKS1B-201ENST00000308987 PRKDCP78527 4128 aaKnown RBP4.16□□□□□ -1.74
CKS1B-201ENST00000308987 DYSFO75923 2080 aa4.15□□□□□ -1.74
CKS1B-201ENST00000308987 MEGF8Q7Z7M0 2845 aa4.15□□□□□ -1.74
CKS1B-201ENST00000308987 LOC100509620A0A075B734 347 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 PIGBOS1A0A0B4J2F0 54 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 MEX3AA1L020 520 aaKnown RBP4.15□□□□□ -1.75
CKS1B-201ENST00000308987 MBD3L4A6NDZ8 208 aaPredicted RBP4.15□□□□□ -1.75
CKS1B-201ENST00000308987 MBD3L3A6NE82 208 aaPredicted RBP4.15□□□□□ -1.75
CKS1B-201ENST00000308987 MSGN1A6NI15 193 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 CRYM-AS1A6NIL9 109 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 MBD3L5A6NJ08 208 aaPredicted RBP4.15□□□□□ -1.75
CKS1B-201ENST00000308987 AQP7P3A6NL99 342 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF726A6NNF4 738 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 COLCA2A8K830 154 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 DEFB108AA8MXU0 73 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 C1orf196B1AJZ1 125 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 FAM157AC9JC47 383 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 K7EPK0 472 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 DNPH1O43598 174 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 EIF1BO60739 113 aaKnown RBP4.15□□□□□ -1.75
CKS1B-201ENST00000308987 ADAP1O75689 374 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 RAD51DO75771 328 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 DHRS3O75911 302 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 P04436 131 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 CRYBA1P05813 215 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 HCKP08631 526 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 SFTA3P0C7M3 94 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 MUC1P15941 1255 aaPredicted RBP4.15□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF708P17019 499 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF17P17021 662 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 RCC1P18754 421 aaPredicted RBP4.15□□□□□ -1.75
CKS1B-201ENST00000308987 MSR1P21757 451 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 PTAFRP25105 342 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 BLVRBP30043 206 aaPredicted RBP4.15□□□□□ -1.75
CKS1B-201ENST00000308987 RPL12P30050 165 aaKnown RBP4.15□□□□□ -1.75
CKS1B-201ENST00000308987 GUCA1AP43080 201 aaPredicted RBP4.15□□□□□ -1.75
CKS1B-201ENST00000308987 LPAR6P43657 344 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 OR3A4PP47883 348 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 NPBWR1P48145 328 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 UCP3P55916 312 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 FBXW4P57775 412 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF121P58317 390 aaPredicted RBP4.15□□□□□ -1.75
CKS1B-201ENST00000308987 RAB1AP62820 205 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 SLC35A1P78382 337 aa4.15□□□□□ -1.75
CKS1B-201ENST00000308987 FOXF1Q12946 379 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms