RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 UBE2V2Q15819 145 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 LY6EQ16553 131 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 TMEM91Q6ZNR0 172 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 ZNRF1Q8ND25 227 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 R3HDM4Q96D70 268 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 C14orf79Q96F83 325 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 UHRF2Q96PU4 802 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 SH2D2AQ9NP31 389 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 SLC25A15Q9Y619 301 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 K7EQM0 130 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 GABRB1P18505 474 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 CSN1S1P47710 185 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 SSX2Q16385 188 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 FAM201AQ5SY85 155 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 CYB5R2Q6BCY4 276 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 ZNF474Q6S9Z5 364 aaPredicted RBP7.9□□□□□ -1.14
PTPRE-202ENST00000306042 ABHD12Q8N2K0 398 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 CLEC7AQ9BXN2 247 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 IDI2-AS1Q9NZ38 188 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 FLVCR2Q9UPI3 526 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 AUP1Q9Y679 476 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 F6UZH7 168 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 PPYP01298 95 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 IL5P05113 134 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 MC5RP33032 325 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 NCR3LG1Q68D85 454 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 IL34Q6ZMJ4 242 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 PNKDQ8N490 385 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 OR2T6Q8NHC8 308 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 AQP3Q92482 292 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 TMEM231Q9H6L2 316 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 MPDZO75970 2070 aa7.9□□□□□ -1.14
PTPRE-202ENST00000306042 WNT9BO14905 357 aa7.9□□□□□ -1.15
PTPRE-202ENST00000306042 VDAC1P21796 283 aa7.9□□□□□ -1.15
PTPRE-202ENST00000306042 FCN2Q15485 313 aa7.9□□□□□ -1.15
PTPRE-202ENST00000306042 LINC00303Q3SY05 128 aa7.9□□□□□ -1.15
PTPRE-202ENST00000306042 FAM166AQ6J272 317 aa7.9□□□□□ -1.15
PTPRE-202ENST00000306042 ZDHHC22Q8N966 263 aa7.9□□□□□ -1.15
PTPRE-202ENST00000306042 OR9G1Q8NH87 305 aa7.9□□□□□ -1.15
PTPRE-202ENST00000306042 KLF2Q9Y5W3 355 aaPredicted RBP7.9□□□□□ -1.15
PTPRE-202ENST00000306042 IGHV3-72A0A0B4J1Y9 119 aa7.9□□□□□ -1.15
PTPRE-202ENST00000306042 PF4V1P10720 104 aa7.9□□□□□ -1.15
PTPRE-202ENST00000306042 P2RX3P56373 397 aa7.9□□□□□ -1.15
PTPRE-202ENST00000306042 CLEC12BQ2HXU8 276 aa7.9□□□□□ -1.15
PTPRE-202ENST00000306042 FDX2Q6P4F2 183 aa7.9□□□□□ -1.15
PTPRE-202ENST00000306042 ZBTB34Q8NCN2 500 aa7.9□□□□□ -1.15
PTPRE-202ENST00000306042 LHX4Q969G2 390 aa7.9□□□□□ -1.15
PTPRE-202ENST00000306042 PTX4Q96A99 478 aa7.9□□□□□ -1.15
PTPRE-202ENST00000306042 A0A1W2PP11 408 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 ZNF729A6NN14 1252 aaPredicted RBP7.89□□□□□ -1.15
PTPRE-202ENST00000306042 ZNF705EA8MWA4 302 aaPredicted RBP7.89□□□□□ -1.15
PTPRE-202ENST00000306042 LYNX1G3V0Z9 82 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 LYNX1P0DP58 116 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 UBE2MP61081 183 aaKnown RBP7.89□□□□□ -1.15
PTPRE-202ENST00000306042 H3F3AP84243 136 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 TAGLNQ01995 201 aaKnown RBP7.89□□□□□ -1.15
PTPRE-202ENST00000306042 RPRMLQ8N4K4 120 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 OR52L2PQ8NGH6 319 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 SRRQ9GZT4 340 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 FAM212BQ9NTI7 297 aaPredicted RBP7.89□□□□□ -1.15
PTPRE-202ENST00000306042 GAR1Q9NY12 217 aaKnown RBP7.89□□□□□ -1.15
PTPRE-202ENST00000306042 TMED3Q9Y3Q3 217 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 ADAMTS9Q9P2N4 1935 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 HEATR1Q9H583 2144 aaKnown RBP7.89□□□□□ -1.15
PTPRE-202ENST00000306042 A0A0U1RQK1 487 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 ZNF320A2RRD8 509 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 K7EM74 188 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 AGPAT2O15120 278 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 LYPD3O95274 346 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 NQO2P16083 231 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 SEZ6L2Q6UXD5 910 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 SLC16A12Q6ZSM3 486 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 TMEM104Q8NE00 496 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 C2orf50Q96LR7 162 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 KLHDC3Q9BQ90 382 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 HDHD3Q9BSH5 251 aaPredicted RBP7.89□□□□□ -1.15
PTPRE-202ENST00000306042 CCL28Q9NRJ3 127 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 H3BP45 60 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 PDGFAP04085 211 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 UQCRFS1P47985 274 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 NAA60Q9H7X0 242 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 SERTAD4Q9NUC0 356 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 H0YL77 283 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 FBP1P09467 338 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 ELLP55199 621 aaPredicted RBP7.89□□□□□ -1.15
PTPRE-202ENST00000306042 TAS2R45P59539 299 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 PCSK4Q6UW60 755 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 ACP7Q6ZNF0 438 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 FAM216BQ8N7L0 139 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 C3orf56Q8N813 242 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 RPS4Y2Q8TD47 263 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 CACNG5Q9UF02 275 aa7.89□□□□□ -1.15
PTPRE-202ENST00000306042 A0A1W2PNU3 283 aaPredicted RBP7.88□□□□□ -1.15
PTPRE-202ENST00000306042 E5RGE8 158 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 DVL1O14640 695 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 S100PP25815 95 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 GLIPR1P48060 266 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 NPBWR2P48146 333 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 GAPTQ8N292 157 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 ARPC5LQ9BPX5 153 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms