RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 VDAC1P21796 283 aa16.33■□□□□ 0.2
HOXC4-201ENST00000303406 OR3A1P47881 315 aa16.33■□□□□ 0.2
HOXC4-201ENST00000303406 P2RY1P47900 373 aa16.33■□□□□ 0.2
HOXC4-201ENST00000303406 P2RX3P56373 397 aa16.33■□□□□ 0.2
HOXC4-201ENST00000303406 GPR157Q5UAW9 335 aa16.33■□□□□ 0.2
HOXC4-201ENST00000303406 LRP11Q86VZ4 500 aa16.33■□□□□ 0.2
HOXC4-201ENST00000303406 ZBTB34Q8NCN2 500 aa16.33■□□□□ 0.2
HOXC4-201ENST00000303406 SNRNP40Q96DI7 357 aaKnown RBP16.33■□□□□ 0.2
HOXC4-201ENST00000303406 MEGF10Q96KG7 1140 aa16.33■□□□□ 0.2
HOXC4-201ENST00000303406 UFSP2Q9NUQ7 469 aa16.33■□□□□ 0.2
HOXC4-201ENST00000303406 SDHAF2Q9NX18 166 aa16.33■□□□□ 0.2
HOXC4-201ENST00000303406 LSM5Q9Y4Y9 91 aaKnown RBP16.33■□□□□ 0.2
HOXC4-201ENST00000303406 IGHV3-64DA0A0J9YX35 117 aa16.32■□□□□ 0.2
HOXC4-201ENST00000303406 KCNAB3O43448 404 aa16.32■□□□□ 0.2
HOXC4-201ENST00000303406 SLC25A6P12236 298 aa16.32■□□□□ 0.2
HOXC4-201ENST00000303406 PTAFRP25105 342 aa16.32■□□□□ 0.2
HOXC4-201ENST00000303406 CEBPDP49716 269 aaPredicted RBP16.32■□□□□ 0.2
HOXC4-201ENST00000303406 NMSQ5H8A3 153 aa16.32■□□□□ 0.2
HOXC4-201ENST00000303406 IL1F10Q8WWZ1 152 aa16.32■□□□□ 0.2
HOXC4-201ENST00000303406 LURAP1Q96LR2 239 aa16.32■□□□□ 0.2
HOXC4-201ENST00000303406 SESN1Q9Y6P5 492 aa16.32■□□□□ 0.2
HOXC4-201ENST00000303406 ZFHX4Q86UP3 3567 aa16.32■□□□□ 0.2
HOXC4-201ENST00000303406 ATP6V1G2-DDX39BF2Z307 99 aa16.31■□□□□ 0.2
HOXC4-201ENST00000303406 FGF16O43320 207 aa16.31■□□□□ 0.2
HOXC4-201ENST00000303406 GPR137BO60478 399 aa16.31■□□□□ 0.2
HOXC4-201ENST00000303406 COL10A1Q03692 680 aa16.31■□□□□ 0.2
HOXC4-201ENST00000303406 TMEM108Q6UXF1 575 aa16.31■□□□□ 0.2
HOXC4-201ENST00000303406 PPP1R35Q8TAP8 253 aa16.31■□□□□ 0.2
HOXC4-201ENST00000303406 FAM216AQ8WUB2 273 aa16.31■□□□□ 0.2
HOXC4-201ENST00000303406 COQ2Q96H96 371 aa16.31■□□□□ 0.2
HOXC4-201ENST00000303406 DMRTA2Q96SC8 542 aa16.31■□□□□ 0.2
HOXC4-201ENST00000303406 NKX2-6A6NCS4 301 aa16.3■□□□□ 0.2
HOXC4-201ENST00000303406 I3L521 148 aa16.3■□□□□ 0.2
HOXC4-201ENST00000303406 HSPA12AO43301 675 aa16.3■□□□□ 0.2
HOXC4-201ENST00000303406 SCGB1D2O95969 90 aa16.3■□□□□ 0.2
HOXC4-201ENST00000303406 MMP9P14780 707 aa16.3■□□□□ 0.2
HOXC4-201ENST00000303406 EIF5AL1Q6IS14 154 aaKnown RBP16.3■□□□□ 0.2
HOXC4-201ENST00000303406 RELL2Q8NC24 303 aaPredicted RBP16.3■□□□□ 0.2
HOXC4-201ENST00000303406 OR52M1Q8NGK5 317 aa16.3■□□□□ 0.2
HOXC4-201ENST00000303406 ERGIC1Q969X5 290 aa16.3■□□□□ 0.2
HOXC4-201ENST00000303406 GALMQ96C23 342 aa16.3■□□□□ 0.2
HOXC4-201ENST00000303406 C11orf1Q9H5F2 150 aa16.3■□□□□ 0.2
HOXC4-201ENST00000303406 BARX1Q9HBU1 254 aaPredicted RBP16.3■□□□□ 0.2
HOXC4-201ENST00000303406 C12orf77C9JDV5 145 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 SHOXO15266 292 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 LHBP01229 141 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 IGLV2-14P01704 120 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 FGF2P09038 288 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 PRDX2P32119 198 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 THOC7Q6I9Y2 204 aaKnown RBP16.29■□□□□ 0.2
HOXC4-201ENST00000303406 FOXRED2Q8IWF2 684 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 SNX22Q96L94 193 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 OR2V2Q96R30 315 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 NCOR1P1Q9H4R4 102 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 ZC4H2Q9NQZ6 224 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 ASF1BQ9NVP2 202 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 ZDHHC8Q9ULC8 765 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 AKAP13Q12802 2813 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 TRAV39A0A0B4J263 110 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 RNF212BA8MTL3 300 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 ZNF737O75373 536 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 JTBO76095 146 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 PSG2P11465 335 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 EGR1P18146 543 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 CEACAM6P40199 344 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 GNMTQ14749 295 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 KRBOX4Q5JUW0 171 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 GCSAMQ8N6F7 178 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 CD177Q8N6Q3 437 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 DMBX1Q8NFW5 382 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 MRPL37Q9BZE1 423 aaKnown RBP16.29■□□□□ 0.2
HOXC4-201ENST00000303406 LIN7CQ9NUP9 197 aaKnown RBP16.29■□□□□ 0.2
HOXC4-201ENST00000303406 IL19Q9UHD0 177 aa16.29■□□□□ 0.2
HOXC4-201ENST00000303406 SVILO95425 2214 aa16.28■□□□□ 0.2
HOXC4-201ENST00000303406 A8MXK9 166 aa16.28■□□□□ 0.2
HOXC4-201ENST00000303406 PVALBP20472 110 aaPredicted RBP16.28■□□□□ 0.2
HOXC4-201ENST00000303406 IL2RGP31785 369 aa16.28■□□□□ 0.2
HOXC4-201ENST00000303406 NKX2-1P43699 371 aaPredicted RBP16.28■□□□□ 0.2
HOXC4-201ENST00000303406 AESQ08117 197 aa16.28■□□□□ 0.2
HOXC4-201ENST00000303406 CR1LQ2VPA4 569 aa16.28■□□□□ 0.2
HOXC4-201ENST00000303406 FAM74A1Q5RGS3 127 aa16.28■□□□□ 0.2
HOXC4-201ENST00000303406 ALKBH2Q6NS38 261 aa16.28■□□□□ 0.2
HOXC4-201ENST00000303406 Q8TCH9 128 aa16.28■□□□□ 0.2
HOXC4-201ENST00000303406 RNF141Q8WVD5 230 aa16.28■□□□□ 0.2
HOXC4-201ENST00000303406 LSM10Q969L4 123 aaKnown RBP16.28■□□□□ 0.2
HOXC4-201ENST00000303406 VKORC1Q9BQB6 163 aa16.28■□□□□ 0.2
HOXC4-201ENST00000303406 PLEKHF2Q9H8W4 249 aa16.28■□□□□ 0.2
HOXC4-201ENST00000303406 FBXL17Q9UF56 701 aa16.28■□□□□ 0.2
HOXC4-201ENST00000303406 RCL1Q9Y2P8 373 aaKnown RBP16.28■□□□□ 0.2
HOXC4-201ENST00000303406 CHD3Q12873 2000 aaKnown RBP16.28■□□□□ 0.2
HOXC4-201ENST00000303406 HEATR1Q9H583 2144 aaKnown RBP16.27■□□□□ 0.2
HOXC4-201ENST00000303406 ADAM20O43506 726 aa16.27■□□□□ 0.2
HOXC4-201ENST00000303406 HBZP02008 142 aa16.27■□□□□ 0.2
HOXC4-201ENST00000303406 ADH4P08319 380 aa16.27■□□□□ 0.2
HOXC4-201ENST00000303406 ZP3P21754 424 aa16.27■□□□□ 0.2
HOXC4-201ENST00000303406 TNFSF4P23510 183 aa16.27■□□□□ 0.2
HOXC4-201ENST00000303406 GABRA2P47869 451 aa16.27■□□□□ 0.2
HOXC4-201ENST00000303406 C22orf34Q6ZV56 151 aa16.27■□□□□ 0.2
HOXC4-201ENST00000303406 CCDC28AQ8IWP9 274 aa16.27■□□□□ 0.2
HOXC4-201ENST00000303406 ZNF645Q8N7E2 425 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms