RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 H3BQ15 152 aa12.14□□□□□ -0.47
SDC2-201ENST00000302190 SYNGR1O43759 233 aa12.14□□□□□ -0.47
SDC2-201ENST00000302190 ANOS1P23352 680 aa12.14□□□□□ -0.47
SDC2-201ENST00000302190 PAX6P26367 422 aa12.14□□□□□ -0.47
SDC2-201ENST00000302190 PDLIM3Q53GG5 364 aaPredicted RBP12.14□□□□□ -0.47
SDC2-201ENST00000302190 NSUN5P2Q63ZY6 315 aa12.14□□□□□ -0.47
SDC2-201ENST00000302190 DHRS13Q6UX07 377 aa12.14□□□□□ -0.47
SDC2-201ENST00000302190 TMEM37Q8WXS4 190 aa12.14□□□□□ -0.47
SDC2-201ENST00000302190 GNPNAT1Q96EK6 184 aaPredicted RBP12.14□□□□□ -0.47
SDC2-201ENST00000302190 HEYLQ9NQ87 328 aaPredicted RBP12.14□□□□□ -0.47
SDC2-201ENST00000302190 OSGIN2Q9Y236 505 aa12.14□□□□□ -0.47
SDC2-201ENST00000302190 LRP4O75096 1905 aa12.14□□□□□ -0.47
SDC2-201ENST00000302190 WIPF3A6NGB9 483 aa12.14□□□□□ -0.47
SDC2-201ENST00000302190 CDIPTO14735 213 aa12.14□□□□□ -0.47
SDC2-201ENST00000302190 CEACAM6P40199 344 aa12.14□□□□□ -0.47
SDC2-201ENST00000302190 PMS2CLQ68D20 193 aa12.14□□□□□ -0.47
SDC2-201ENST00000302190 BTNL3Q6UXE8 466 aa12.14□□□□□ -0.47
SDC2-201ENST00000302190 LRP11Q86VZ4 500 aa12.14□□□□□ -0.47
SDC2-201ENST00000302190 KDF1Q8NAX2 398 aaPredicted RBP12.14□□□□□ -0.47
SDC2-201ENST00000302190 MARS2Q96GW9 593 aaKnown RBP12.14□□□□□ -0.47
SDC2-201ENST00000302190 FAM117AQ9C073 453 aa12.14□□□□□ -0.47
SDC2-201ENST00000302190 GPR35Q9HC97 309 aa12.14□□□□□ -0.47
SDC2-201ENST00000302190 ENY2Q9NPA8 101 aa12.14□□□□□ -0.47
SDC2-201ENST00000302190 CHCHD2Q9Y6H1 151 aaPredicted RBP12.14□□□□□ -0.47
SDC2-201ENST00000302190 DFFBO76075 338 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 COX5BP10606 129 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 GCH1P30793 250 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 SURF2Q15527 256 aaPredicted RBP12.13□□□□□ -0.47
SDC2-201ENST00000302190 ZNF880Q6PDB4 577 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 SLC23A3Q6PIS1 610 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 NFAM1Q8NET5 270 aaPredicted RBP12.13□□□□□ -0.47
SDC2-201ENST00000302190 Q96M66 194 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 PARP11Q9NR21 331 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 HEATR1Q9H583 2144 aaKnown RBP12.13□□□□□ -0.47
SDC2-201ENST00000302190 CRYM-AS1A6NIL9 109 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 LDLRAD4O15165 306 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 PSG2P11465 335 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 DLK1P80370 383 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 OR1C1Q15619 314 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 TMEM252Q8N6L7 170 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 PIEZO2Q9H5I5 2752 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 IGHMP01871 453 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 SRD5A2P31213 254 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 P2RY1P47900 373 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 GAMTQ14353 236 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 IL11RAQ14626 422 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 TCFL5Q9UL49 500 aa12.13□□□□□ -0.47
SDC2-201ENST00000302190 AKAP13Q12802 2813 aa12.12□□□□□ -0.47
SDC2-201ENST00000302190 A0A0U1RQV5 110 aa12.12□□□□□ -0.47
SDC2-201ENST00000302190 H7BYZ3 331 aa12.12□□□□□ -0.47
SDC2-201ENST00000302190 FOLR2P14207 255 aa12.12□□□□□ -0.47
SDC2-201ENST00000302190 FAM58AQ8N1B3 248 aa12.12□□□□□ -0.47
SDC2-201ENST00000302190 TVP23CQ96ET8 276 aa12.12□□□□□ -0.47
SDC2-201ENST00000302190 ATG101Q9BSB4 218 aa12.12□□□□□ -0.47
SDC2-201ENST00000302190 A0A1W2PNV4 684 aa12.12□□□□□ -0.47
SDC2-201ENST00000302190 CELA3AP09093 270 aa12.12□□□□□ -0.47
SDC2-201ENST00000302190 IL13RA2Q14627 380 aa12.12□□□□□ -0.47
SDC2-201ENST00000302190 ZNF573Q86YE8 665 aa12.12□□□□□ -0.47
SDC2-201ENST00000302190 DNASE2BQ8WZ79 361 aa12.12□□□□□ -0.47
SDC2-201ENST00000302190 APOBEC3DQ96AK3 386 aaPredicted RBP12.12□□□□□ -0.47
SDC2-201ENST00000302190 SNX22Q96L94 193 aa12.12□□□□□ -0.47
SDC2-201ENST00000302190 RBM11P57052 281 aaKnown RBP12.12□□□□□ -0.47
SDC2-201ENST00000302190 RPP30P78346 268 aaKnown RBP12.12□□□□□ -0.47
SDC2-201ENST00000302190 OR8G1Q15617 311 aa12.12□□□□□ -0.47
SDC2-201ENST00000302190 CDPF1Q6NVV7 123 aa12.12□□□□□ -0.47
SDC2-201ENST00000302190 FGFBP3Q8TAT2 258 aa12.12□□□□□ -0.47
SDC2-201ENST00000302190 DTD1Q8TEA8 209 aa12.12□□□□□ -0.47
SDC2-201ENST00000302190 ZNF665Q9H7R5 613 aa12.12□□□□□ -0.47
SDC2-201ENST00000302190 TP53TG5Q9Y2B4 290 aa12.12□□□□□ -0.47
SDC2-201ENST00000302190 CD46P15529 392 aa12.11□□□□□ -0.47
SDC2-201ENST00000302190 SLC10A1Q14973 349 aa12.11□□□□□ -0.47
SDC2-201ENST00000302190 PCOLCEQ15113 449 aa12.11□□□□□ -0.47
SDC2-201ENST00000302190 C1orf87Q8N0U7 546 aa12.11□□□□□ -0.47
SDC2-201ENST00000302190 KCNE4Q8WWG9 221 aa12.11□□□□□ -0.47
SDC2-201ENST00000302190 ARV1Q9H2C2 271 aa12.11□□□□□ -0.47
SDC2-201ENST00000302190 PATZ1Q9HBE1 687 aaKnown RBP12.11□□□□□ -0.47
SDC2-201ENST00000302190 SERTAD4Q9NUC0 356 aa12.11□□□□□ -0.47
SDC2-201ENST00000302190 PILRBQ9UKJ0 227 aa12.11□□□□□ -0.47
SDC2-201ENST00000302190 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.11□□□□□ -0.47
SDC2-201ENST00000302190 VDAC1P21796 283 aa12.11□□□□□ -0.47
SDC2-201ENST00000302190 CD200P41217 278 aa12.11□□□□□ -0.47
SDC2-201ENST00000302190 SUCLG1P53597 346 aaKnown RBP12.11□□□□□ -0.47
SDC2-201ENST00000302190 COTL1Q14019 142 aa12.11□□□□□ -0.47
SDC2-201ENST00000302190 MSMO1Q15800 293 aa12.11□□□□□ -0.47
SDC2-201ENST00000302190 ZNF441Q8N8Z8 693 aa12.11□□□□□ -0.47
SDC2-201ENST00000302190 RAB39BQ96DA2 213 aa12.11□□□□□ -0.47
SDC2-201ENST00000302190 TWSG1Q9GZX9 223 aa12.11□□□□□ -0.47
SDC2-201ENST00000302190 SCGB1D1O95968 90 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 AGAP20933 346 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 CEBPDP49716 269 aaPredicted RBP12.1□□□□□ -0.47
SDC2-201ENST00000302190 ERVS71-1P61550 626 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 PKIAP61925 76 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 H2BFWTQ7Z2G1 175 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 MALSU1Q96EH3 234 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 CACFD1Q9UGQ2 172 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 C9JQL5 133 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 PPP5D1E7EU14 171 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 OPN1MWP04001 364 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 OPN1MW2P0DN77 364 aa12.1□□□□□ -0.47
SDC2-201ENST00000302190 OPN1MW3P0DN78 364 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms