RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 IGKV1-33P01594 117 aa9.32□□□□□ -0.92
ZNF558-201ENST00000301475 CST2P09228 141 aa9.32□□□□□ -0.92
ZNF558-201ENST00000301475 SCTP09683 121 aa9.32□□□□□ -0.92
ZNF558-201ENST00000301475 TCN2P20062 427 aa9.32□□□□□ -0.92
ZNF558-201ENST00000301475 CCKARP32238 428 aa9.32□□□□□ -0.92
ZNF558-201ENST00000301475 RBM11P57052 281 aaKnown RBP9.32□□□□□ -0.92
ZNF558-201ENST00000301475 MEF2BQ02080 365 aaPredicted RBP9.32□□□□□ -0.92
ZNF558-201ENST00000301475 CNN3Q15417 329 aaKnown RBP9.32□□□□□ -0.92
ZNF558-201ENST00000301475 TMEM211Q6ICI0 200 aa9.32□□□□□ -0.92
ZNF558-201ENST00000301475 OR10G3Q8NGC4 313 aa9.32□□□□□ -0.92
ZNF558-201ENST00000301475 REPIN1Q9BWE0 567 aaKnown RBP9.32□□□□□ -0.92
ZNF558-201ENST00000301475 PLK3Q9H4B4 646 aa9.32□□□□□ -0.92
ZNF558-201ENST00000301475 OR6C3Q9NZP0 311 aa9.32□□□□□ -0.92
ZNF558-201ENST00000301475 MRPS18CQ9Y3D5 142 aaKnown RBP9.32□□□□□ -0.92
ZNF558-201ENST00000301475 NCOR1O75376 2440 aa9.32□□□□□ -0.92
ZNF558-201ENST00000301475 DUXBA0A1W2PPF3 345 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 HMGB3O15347 200 aaKnown RBP9.31□□□□□ -0.92
ZNF558-201ENST00000301475 NUPR1O60356 82 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 RPLP1P05386 114 aaKnown RBP9.31□□□□□ -0.92
ZNF558-201ENST00000301475 GUCA1AP43080 201 aaPredicted RBP9.31□□□□□ -0.92
ZNF558-201ENST00000301475 OR3A1P47881 315 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 C10orf128Q5T292 105 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 Q6ZS52 159 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 TMEM256Q8N2U0 113 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 PARLQ9H300 379 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 NAGKQ9UJ70 344 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 IGHV3-15A0A0B4J1V0 119 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 GGCTO75223 188 aaKnown RBP9.31□□□□□ -0.92
ZNF558-201ENST00000301475 IAPPP10997 89 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 IRF2P14316 349 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 CRYGSP22914 178 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 PCP4P48539 62 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 MRPS11P82912 194 aaKnown RBP9.31□□□□□ -0.92
ZNF558-201ENST00000301475 RNPS1Q15287 305 aaKnown RBP9.31□□□□□ -0.92
ZNF558-201ENST00000301475 ACOT6Q3I5F7 207 aaPredicted RBP9.31□□□□□ -0.92
ZNF558-201ENST00000301475 Q6ZRM9 215 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 LHFPL2Q6ZUX7 228 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 SCGB1C1Q8TD33 95 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 GPR146Q96CH1 333 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 PSMG3Q9BT73 122 aaPredicted RBP9.31□□□□□ -0.92
ZNF558-201ENST00000301475 RBM24Q9BX46 236 aaKnown RBP9.31□□□□□ -0.92
ZNF558-201ENST00000301475 OR51I2Q9H344 312 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 CD207Q9UJ71 328 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 TOX3O15405 576 aaPredicted RBP9.31□□□□□ -0.92
ZNF558-201ENST00000301475 TLX3O43711 291 aaPredicted RBP9.31□□□□□ -0.92
ZNF558-201ENST00000301475 CD33P20138 364 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 BLKP51451 505 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 CNN1P51911 297 aaKnown RBP9.31□□□□□ -0.92
ZNF558-201ENST00000301475 FOXL2NBQ6ZUU3 175 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 WDR5BQ86VZ2 330 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 CALHM1Q8IU99 346 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 OR5D13Q8NGL4 314 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 GATAD1Q8WUU5 269 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 SPTSSAQ969W0 71 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 CHRNA10Q9GZZ6 450 aa9.31□□□□□ -0.92
ZNF558-201ENST00000301475 SDK2Q58EX2 2172 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 IGKV1-6A0A0C4DH72 117 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 NRASP01111 189 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 IFNA1P01562 189 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 TYMSP04818 313 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 TMEM41BQ5BJD5 291 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 ZNF705AQ6ZN79 300 aaPredicted RBP9.3□□□□□ -0.92
ZNF558-201ENST00000301475 ZNF573Q86YE8 665 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 PRR18Q8N4B5 295 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 RPP25LQ8N5L8 163 aaKnown RBP9.3□□□□□ -0.92
ZNF558-201ENST00000301475 NFAM1Q8NET5 270 aaPredicted RBP9.3□□□□□ -0.92
ZNF558-201ENST00000301475 OR2T10Q8NGZ9 312 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 LMX1AQ8TE12 382 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 LHX4Q969G2 390 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 SDSLQ96GA7 329 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 DIRC2Q96SL1 478 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 IL36GQ9NZH8 169 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 CBY1Q9Y3M2 126 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 TRBV11-1A0A0K0K1C0 115 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 H0Y980 276 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 DHHO43323 396 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 TUSC2O75896 110 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 ZNF92Q03936 586 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 GAGE1Q13065 139 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 TESK1Q15569 626 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 TDRG1Q3Y452 100 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 ACSF3Q4G176 576 aaPredicted RBP9.3□□□□□ -0.92
ZNF558-201ENST00000301475 KIAA0895LQ68EN5 471 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 TMEM42Q69YG0 159 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 OR2M3Q8NG83 312 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 MRPL30Q8TCC3 161 aaKnown RBP9.3□□□□□ -0.92
ZNF558-201ENST00000301475 EXTL1Q92935 676 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 TMEM54Q969K7 222 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 METTL7AQ9H8H3 244 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 RNF150Q9ULK6 438 aa9.3□□□□□ -0.92
ZNF558-201ENST00000301475 A0A1B0GX78 115 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 LILRA1O75019 489 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 HPRT1P00492 218 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 KLHDC7BQ96G42 594 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 RASL10BQ96S79 203 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 LOC102725191A0A1B0GVB3 256 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 TP53I11O14683 189 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 PGLYRP1O75594 196 aaPredicted RBP9.29□□□□□ -0.92
ZNF558-201ENST00000301475 SELEP16581 610 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 IL3RAP26951 378 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms