RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 ACOT6Q3I5F7 207 aaPredicted RBP11.17□□□□□ -0.62
TVP23A-201ENST00000299866 LHFPL2Q6ZUX7 228 aa11.17□□□□□ -0.62
TVP23A-201ENST00000299866 ZNF295-AS1Q8N0V1 137 aa11.17□□□□□ -0.62
TVP23A-201ENST00000299866 OR6C3Q9NZP0 311 aa11.17□□□□□ -0.62
TVP23A-201ENST00000299866 DMRTA1Q5VZB9 504 aa11.17□□□□□ -0.62
TVP23A-201ENST00000299866 MRPL30Q8TCC3 161 aaKnown RBP11.17□□□□□ -0.62
TVP23A-201ENST00000299866 NABP1Q96AH0 204 aa11.17□□□□□ -0.62
TVP23A-201ENST00000299866 C10orf35Q96D05 121 aa11.17□□□□□ -0.62
TVP23A-201ENST00000299866 HIPK2Q9H2X6 1198 aa11.17□□□□□ -0.62
TVP23A-201ENST00000299866 SLC25A22Q9H936 323 aa11.17□□□□□ -0.62
TVP23A-201ENST00000299866 PSENENQ9NZ42 101 aa11.17□□□□□ -0.62
TVP23A-201ENST00000299866 TMEM210A6NLX4 147 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 LINC01565O15544 149 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 HPRT1P00492 218 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 SERPINE2P07093 398 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 RBM11P57052 281 aaKnown RBP11.16□□□□□ -0.62
TVP23A-201ENST00000299866 ARSJQ5FYB0 599 aaPredicted RBP11.16□□□□□ -0.62
TVP23A-201ENST00000299866 KIAA0895LQ68EN5 471 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 Q6ZRM9 215 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 ZNF525Q8N782 197 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 UCN2Q96RP3 112 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 DIRC2Q96SL1 478 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 GYPAP02724 150 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 OTX1P32242 354 aaPredicted RBP11.16□□□□□ -0.62
TVP23A-201ENST00000299866 TDRG1Q3Y452 100 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 FAM78BQ5VT40 261 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 ULBP2Q9BZM5 246 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 OPN3Q9H1Y3 402 aaPredicted RBP11.16□□□□□ -0.62
TVP23A-201ENST00000299866 PLSCR2Q9NRY7 297 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 A0A0U1RQK1 487 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 A0A1B0GX78 115 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 ZNF320A2RRD8 509 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 LILRA5A6NI73 299 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 NPIPA2E9PIF3 369 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 C5orf67F2Z3F1 127 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 NPIPA3F8WFD2 350 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 ZNHIT1O43257 154 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 SELEP16581 610 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 OR10J1P30954 320 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 TMEM41BQ5BJD5 291 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 SPANXN5Q5MJ07 72 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 OR8G2PQ6IF36 304 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 TOMM20LQ6UXN7 152 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 ADPRHL1Q8NDY3 354 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 ZNF845Q96IR2 970 aaPredicted RBP11.16□□□□□ -0.62
TVP23A-201ENST00000299866 OR4C12Q96R67 309 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 PARD6AQ9NPB6 346 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 CACNG5Q9UF02 275 aa11.16□□□□□ -0.62
TVP23A-201ENST00000299866 LAMA1P25391 3075 aa11.15□□□□□ -0.62
TVP23A-201ENST00000299866 UBE2L5PA0A1B0GUS4 154 aa11.15□□□□□ -0.62
TVP23A-201ENST00000299866 CLEC18AA5D8T8 446 aa11.15□□□□□ -0.62
TVP23A-201ENST00000299866 PGLYRP1O75594 196 aaPredicted RBP11.15□□□□□ -0.62
TVP23A-201ENST00000299866 PSG2P11465 335 aa11.15□□□□□ -0.62
TVP23A-201ENST00000299866 MYF5P13349 255 aa11.15□□□□□ -0.62
TVP23A-201ENST00000299866 PSMB3P49720 205 aa11.15□□□□□ -0.62
TVP23A-201ENST00000299866 CLEC18CQ8NCF0 446 aa11.15□□□□□ -0.62
TVP23A-201ENST00000299866 TRAPPC1Q9Y5R8 145 aa11.15□□□□□ -0.62
TVP23A-201ENST00000299866 ZNF407Q9C0G0 2248 aa11.15□□□□□ -0.62
TVP23A-201ENST00000299866 KIR2DL5BA0A0G2JN68 375 aa11.15□□□□□ -0.62
TVP23A-201ENST00000299866 KIR2DL5BA0A0G2JPC4 375 aa11.15□□□□□ -0.62
TVP23A-201ENST00000299866 PDGFBP01127 241 aaPredicted RBP11.15□□□□□ -0.62
TVP23A-201ENST00000299866 IGKV1D-33P01593 117 aa11.15□□□□□ -0.62
TVP23A-201ENST00000299866 IGKV1-33P01594 117 aa11.15□□□□□ -0.62
TVP23A-201ENST00000299866 OR8B8Q15620 311 aa11.15□□□□□ -0.62
TVP23A-201ENST00000299866 KIR2DL5AQ8N109 375 aa11.15□□□□□ -0.62
TVP23A-201ENST00000299866 RPP25LQ8N5L8 163 aaKnown RBP11.15□□□□□ -0.62
TVP23A-201ENST00000299866 RAB40CQ96S21 281 aa11.15□□□□□ -0.62
TVP23A-201ENST00000299866 ZNF16P17020 682 aaPredicted RBP11.14□□□□□ -0.63
TVP23A-201ENST00000299866 BMP5P22003 454 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 HAPLN4Q86UW8 402 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 ZNF611Q8N823 705 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 OR2M3Q8NG83 312 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 DTD1Q8TEA8 209 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 RNF150Q9ULK6 438 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 SDK2Q58EX2 2172 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 SYNGR2O43760 224 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 EGR1P18146 543 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 SPINK2P20155 84 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 MSX1P28360 303 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 GCH1P30793 250 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 PTGDSP41222 190 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 TFPI2P48307 235 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 ZNF573Q86YE8 665 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 OR5D13Q8NGL4 314 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 HS3ST6Q96QI5 342 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 PAM16Q9Y3D7 125 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 DOCK11Q5JSL3 2073 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 CD300LBA8K4G0 201 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 LILRA1O75019 489 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 LRRC75BQ2VPJ9 315 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 ASCL4Q6XD76 172 aa11.14□□□□□ -0.63
TVP23A-201ENST00000299866 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.14□□□□□ -0.63
TVP23A-201ENST00000299866 CISD2Q8N5K1 135 aaKnown RBP11.14□□□□□ -0.63
TVP23A-201ENST00000299866 DUXBA0A1W2PPF3 345 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 GRIFINA4D1Z8 144 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 M0QZK8 103 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 GGCTO75223 188 aaKnown RBP11.13□□□□□ -0.63
TVP23A-201ENST00000299866 IL3RAP26951 378 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 PMP22Q01453 160 aa11.13□□□□□ -0.63
TVP23A-201ENST00000299866 OR5I1Q13606 314 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms