RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 LGALSLQ3ZCW2 172 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-202ENST00000297979 ABCA11PQ4W5N1 156 aa12.01□□□□□ -0.49
C9orf3-202ENST00000297979 Q5PR19 223 aa12.01□□□□□ -0.49
C9orf3-202ENST00000297979 C5orf24Q7Z6I8 188 aa12.01□□□□□ -0.49
C9orf3-202ENST00000297979 SGPP2Q8IWX5 399 aa12.01□□□□□ -0.49
C9orf3-202ENST00000297979 GAPTQ8N292 157 aa12.01□□□□□ -0.49
C9orf3-202ENST00000297979 PIK3IP1Q96FE7 263 aa12.01□□□□□ -0.49
C9orf3-202ENST00000297979 WFIKKN1Q96NZ8 548 aa12.01□□□□□ -0.49
C9orf3-202ENST00000297979 ESRP2Q9H6T0 727 aaKnown RBP12.01□□□□□ -0.49
C9orf3-202ENST00000297979 PIEZO1Q92508 2521 aa12.01□□□□□ -0.49
C9orf3-202ENST00000297979 IFNA2P01563 188 aa12.01□□□□□ -0.49
C9orf3-202ENST00000297979 CD8AP01732 235 aa12.01□□□□□ -0.49
C9orf3-202ENST00000297979 IGHV2-70P01814 119 aa12.01□□□□□ -0.49
C9orf3-202ENST00000297979 RCC1P18754 421 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-202ENST00000297979 PIGPP57054 158 aa12.01□□□□□ -0.49
C9orf3-202ENST00000297979 HOXA4Q00056 320 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-202ENST00000297979 ANKRD55Q3KP44 614 aa12.01□□□□□ -0.49
C9orf3-202ENST00000297979 OR4A4PQ8NGN8 299 aa12.01□□□□□ -0.49
C9orf3-202ENST00000297979 PRR7Q8TB68 274 aa12.01□□□□□ -0.49
C9orf3-202ENST00000297979 ZNF251Q9BRH9 671 aa12.01□□□□□ -0.49
C9orf3-202ENST00000297979 NGBQ9NPG2 151 aa12.01□□□□□ -0.49
C9orf3-202ENST00000297979 RASL12Q9NYN1 266 aa12.01□□□□□ -0.49
C9orf3-202ENST00000297979 TEX13DA0A0J9YY54 714 aaPredicted RBP12□□□□□ -0.49
C9orf3-202ENST00000297979 ZNF81P51508 661 aa12□□□□□ -0.49
C9orf3-202ENST00000297979 LY6DQ14210 128 aa12□□□□□ -0.49
C9orf3-202ENST00000297979 TAS2R3Q9NYW6 316 aa12□□□□□ -0.49
C9orf3-202ENST00000297979 PRR13Q9NZ81 148 aa12□□□□□ -0.49
C9orf3-202ENST00000297979 CHD3Q12873 2000 aaKnown RBP12□□□□□ -0.49
C9orf3-202ENST00000297979 IGKV1-6A0A0C4DH72 117 aa12□□□□□ -0.49
C9orf3-202ENST00000297979 A0A1W2PN81 502 aa12□□□□□ -0.49
C9orf3-202ENST00000297979 TCAPO15273 167 aa12□□□□□ -0.49
C9orf3-202ENST00000297979 PSPNO60542 156 aa12□□□□□ -0.49
C9orf3-202ENST00000297979 CHRNB4P30926 498 aa12□□□□□ -0.49
C9orf3-202ENST00000297979 CHRNA7P36544 502 aa12□□□□□ -0.49
C9orf3-202ENST00000297979 CFHR2P36980 270 aa12□□□□□ -0.49
C9orf3-202ENST00000297979 SORDQ00796 357 aa12□□□□□ -0.49
C9orf3-202ENST00000297979 RAB18Q9NP72 206 aa12□□□□□ -0.49
C9orf3-202ENST00000297979 TRAPPC2LQ9UL33 140 aa12□□□□□ -0.49
C9orf3-202ENST00000297979 NCOR2Q9Y618 2525 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 SRRM5B3KS81 715 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 C22orf46C9J442 243 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 IFNL4K9M1U5 179 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 STAG3L3P0CL85 134 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 RBMXP38159 391 aaKnown RBP11.99□□□□□ -0.49
C9orf3-202ENST00000297979 GSG1LQ6UXU4 331 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 MOGAT3Q86VF5 341 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 ITLN1Q8WWA0 313 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 SEC22AQ96IW7 307 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 CABLES2Q9BTV7 478 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 RSRP1Q9BUV0 290 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 SLC2A9Q9NRM0 540 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 FXYD6-FXYD2A0A087WZ82 144 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 XKRY2A2RUG3 117 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 C5orf51A6NDU8 294 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 RFPL4AA6NLU0 287 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 RFPL4AL1F8VTS6 287 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 TUSC2O75896 110 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 SNAPC5O75971 98 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 EGR1P18146 543 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 SERPINF1P36955 418 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 FGL1Q08830 312 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 RTN4IP1Q8WWV3 396 aaPredicted RBP11.99□□□□□ -0.49
C9orf3-202ENST00000297979 NAA60Q9H7X0 242 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 COMMD9Q9P000 198 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 ZDHHC8Q9ULC8 765 aa11.99□□□□□ -0.49
C9orf3-202ENST00000297979 TMEM8BA6NDV4 472 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 FAM90A27PA6NNH2 459 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 HMSDA8MTL9 139 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 IGHV1-46P01743 117 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 GATA4P43694 442 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 FBXL19-AS1Q494R0 122 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 PHLDA2Q53GA4 152 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 SPRNQ5BIV9 151 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 PCSK4Q6UW60 755 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 FAM90A1Q86YD7 464 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 TNFRSF14Q92956 283 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 MBNL3Q9NUK0 354 aaKnown RBP11.98□□□□□ -0.49
C9orf3-202ENST00000297979 WIPI2Q9Y4P8 454 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 PCNX1Q96RV3 2341 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 TRAV14DV4A0A0A6YYC5 116 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 TMEM30CPA0ZSE6 113 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 TNFSF4P23510 183 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 SSTR2P30874 369 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 KCNJ3P48549 501 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 TNFAIP6P98066 277 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-202ENST00000297979 BTN1A1Q13410 526 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 ZNF273Q14593 569 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 ADIPOQQ15848 244 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 ADAM5Q6NVV9 412 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 CCDC71LQ8N9Z2 235 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 KIRREL1Q96J84 757 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 IL19Q9UHD0 177 aa11.98□□□□□ -0.49
C9orf3-202ENST00000297979 TRBV6-7A0A0A0MS04 114 aa11.97□□□□□ -0.49
C9orf3-202ENST00000297979 TRAV39A0A0B4J263 110 aa11.97□□□□□ -0.49
C9orf3-202ENST00000297979 C13orf42A0A1B0GVH6 325 aa11.97□□□□□ -0.49
C9orf3-202ENST00000297979 A0A1W2PPH5 198 aa11.97□□□□□ -0.49
C9orf3-202ENST00000297979 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-202ENST00000297979 ADAP1O75689 374 aa11.97□□□□□ -0.49
C9orf3-202ENST00000297979 OR4A8P0C604 315 aa11.97□□□□□ -0.49
C9orf3-202ENST00000297979 S100PP25815 95 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms