RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 ZNF737O75373 536 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 F2RP25116 425 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 C16orf82Q7Z2V1 217 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 OR10A7Q8NGE5 316 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 M1APQ8TC57 530 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 CPT1CQ8TCG5 803 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 PPP5D1E7EU14 171 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 H7BYZ3 331 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 SRFP11831 508 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 UCP1P25874 307 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 PMP22Q01453 160 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 VASH2Q86V25 355 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 MRPL41Q8IXM3 137 aaKnown RBP12.59□□□□□ -0.39
CCNF-201ENST00000293968 H1FOOQ8IZA3 346 aaPredicted RBP12.59□□□□□ -0.39
CCNF-201ENST00000293968 CLDN23Q96B33 292 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 PRRG4Q9BZD6 226 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 ESPL1Q14674 2120 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 MRPL33O75394 65 aaKnown RBP12.59□□□□□ -0.39
CCNF-201ENST00000293968 MAS1LP35410 378 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 RTP5Q14D33 572 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 EXT1Q16394 746 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 FAM90A2PQ658T7 463 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 OR8G5Q8NG78 346 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 OR4F5Q8NH21 305 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 RCC1LQ96I51 464 aaKnown RBP12.59□□□□□ -0.39
CCNF-201ENST00000293968 LURAP1Q96LR2 239 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 OR4F4Q96R69 305 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 AURKAIP1Q9NWT8 199 aaPredicted RBP12.59□□□□□ -0.39
CCNF-201ENST00000293968 NOSIPQ9Y314 301 aaKnown RBP12.59□□□□□ -0.39
CCNF-201ENST00000293968 B4DEV8 164 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 SYNGR2O43760 224 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 LMO1P25800 156 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 CLDN15P56746 228 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 HBG1P69891 147 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 HBG2P69892 147 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 ZDHHC23Q8IYP9 409 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 CPEB3Q8NE35 698 aaKnown RBP12.59□□□□□ -0.39
CCNF-201ENST00000293968 GPR35Q9HC97 309 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 REC114Q7Z4M0 266 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 ODF3L1Q8IXM7 274 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 CRIM1Q9NZV1 1036 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 OR1A1Q9P1Q5 309 aa12.59□□□□□ -0.39
CCNF-201ENST00000293968 EML6Q6ZMW3 1958 aa12.58□□□□□ -0.39
CCNF-201ENST00000293968 A0A1B0GU03 582 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 CFIP05156 583 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 RFPL3SP0C7P2 107 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 MDH2P40926 338 aaKnown RBP12.58□□□□□ -0.4
CCNF-201ENST00000293968 PAX9P55771 341 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 ARF1P84077 181 aaKnown RBP12.58□□□□□ -0.4
CCNF-201ENST00000293968 PNRC1Q12796 327 aaPredicted RBP12.58□□□□□ -0.4
CCNF-201ENST00000293968 RNF138Q8WVD3 245 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 RAB40CQ96S21 281 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 OPN1MWP04001 364 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 SNRPCP09234 159 aaKnown RBP12.58□□□□□ -0.4
CCNF-201ENST00000293968 MMP7P09237 267 aaPredicted RBP12.58□□□□□ -0.4
CCNF-201ENST00000293968 OPN1MW2P0DN77 364 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 OPN1MW3P0DN78 364 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 OR13D1Q8NGV5 346 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 OR4X1Q8NH49 305 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 OR2V1Q8NHB1 315 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 PLSCR2Q9NRY7 297 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 PLA2G3Q9NZ20 509 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 PITPNC1Q9UKF7 332 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 RNF150Q9ULK6 438 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 H0Y980 276 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 SIRPB1O00241 398 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 Q6ZRM9 215 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 SSX7Q7RTT5 188 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 OR5D13Q8NGL4 314 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 ADGRG7Q96K78 797 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 CISD1Q9NZ45 108 aaKnown RBP12.58□□□□□ -0.4
CCNF-201ENST00000293968 MTCH1Q9NZJ7 389 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 VAX2Q9UIW0 290 aa12.58□□□□□ -0.4
CCNF-201ENST00000293968 IGKV1-6A0A0C4DH72 117 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 A0A0U1RQK1 487 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 CCL4P13236 92 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 GALR1P47211 349 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 COL10A1Q03692 680 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 FOXO1Q12778 655 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 SPATA46Q5T0L3 261 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 TMEM42Q69YG0 159 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 ASCL4Q6XD76 172 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 FOXL2NBQ6ZUU3 175 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 SDF2L1Q9HCN8 221 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 PRSS50Q9UI38 385 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 MRPS17Q9Y2R5 130 aaKnown RBP12.57□□□□□ -0.4
CCNF-201ENST00000293968 MLF1P58340 268 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 TMEM241Q24JQ0 296 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 PCGF1Q9BSM1 259 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 C11orf1Q9H5F2 150 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 SEMA5BQ9P283 1151 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 TRAPPC2LQ9UL33 140 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 WASF3Q9UPY6 502 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 AHCTF1Q8WYP5 2266 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 CTXN2P0C2S0 81 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 FGF7P21781 194 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 SSTP61278 116 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 ARL16Q0P5N6 197 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 PLPPR1Q8TBJ4 325 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 OR4C12Q96R67 309 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms