RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 SNCAP37840 140 aa15.55■□□□□ 0.08
SHKBP1-201ENST00000291842 UCP2P55851 309 aa15.55■□□□□ 0.08
SHKBP1-201ENST00000291842 FAM214BQ7L5A3 538 aa15.55■□□□□ 0.08
SHKBP1-201ENST00000291842 ODF3L1Q8IXM7 274 aa15.55■□□□□ 0.08
SHKBP1-201ENST00000291842 OR5D13Q8NGL4 314 aa15.55■□□□□ 0.08
SHKBP1-201ENST00000291842 FAM213BQ8TBF2 198 aa15.55■□□□□ 0.08
SHKBP1-201ENST00000291842 EIF5A2Q9GZV4 153 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-201ENST00000291842 LYRM2Q9NU23 88 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-201ENST00000291842 AKR1C3P42330 323 aa15.54■□□□□ 0.08
SHKBP1-201ENST00000291842 GABRA6Q16445 453 aa15.54■□□□□ 0.08
SHKBP1-201ENST00000291842 DHRS7BQ6IAN0 325 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-201ENST00000291842 OR10V1Q8NGI7 309 aa15.54■□□□□ 0.08
SHKBP1-201ENST00000291842 OR5C1Q8NGR4 320 aa15.54■□□□□ 0.08
SHKBP1-201ENST00000291842 ABHD14AQ9BUJ0 271 aa15.54■□□□□ 0.08
SHKBP1-201ENST00000291842 PLEKHF2Q9H8W4 249 aa15.54■□□□□ 0.08
SHKBP1-201ENST00000291842 TAAR3PQ9P1P4 343 aa15.54■□□□□ 0.08
SHKBP1-201ENST00000291842 FZR1Q9UM11 496 aa15.54■□□□□ 0.08
SHKBP1-201ENST00000291842 RBM7Q9Y580 266 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-201ENST00000291842 H3BP45 60 aa15.54■□□□□ 0.08
SHKBP1-201ENST00000291842 SERPINE2P07093 398 aa15.54■□□□□ 0.08
SHKBP1-201ENST00000291842 ZNF16P17020 682 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-201ENST00000291842 ID3Q02535 119 aa15.54■□□□□ 0.08
SHKBP1-201ENST00000291842 ZNF826PQ6ZT77 177 aa15.54■□□□□ 0.08
SHKBP1-201ENST00000291842 ESRP2Q9H6T0 727 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-201ENST00000291842 OBP2BQ9NPH6 170 aa15.54■□□□□ 0.08
SHKBP1-201ENST00000291842 IGLV2-14P01704 120 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 TFF1P04155 84 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 ATP6V0CP27449 155 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 DYNLT3P51808 116 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 ERVK11-1P61568 191 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 TESK1Q15569 626 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 OR8G1Q15617 311 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 GUK1Q16774 197 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 ZNF497Q6ZNH5 498 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 PIP4P1Q86T03 277 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 KLF14Q8TD94 323 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 CABLES2Q9BTV7 478 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 KCNS2Q9ULS6 477 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 POLDIP2Q9Y2S7 368 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 WRBO00258 174 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 WNT9BO14905 357 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 PPP1CCP36873 323 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 FOXF2Q12947 444 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 HFEQ30201 348 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 Q6ZT83 130 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 C9orf106Q8NAJ2 232 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 OR2G3Q8NGZ4 309 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 GPR146Q96CH1 333 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 IFT22Q9H7X7 185 aa15.53■□□□□ 0.08
SHKBP1-201ENST00000291842 H7C2Y5 167 aa15.52■□□□□ 0.08
SHKBP1-201ENST00000291842 IGHG3P01860 377 aa15.52■□□□□ 0.08
SHKBP1-201ENST00000291842 PGA5P0DJD9 388 aa15.52■□□□□ 0.08
SHKBP1-201ENST00000291842 S100GP29377 79 aa15.52■□□□□ 0.08
SHKBP1-201ENST00000291842 Q6ZRM9 215 aa15.52■□□□□ 0.08
SHKBP1-201ENST00000291842 RNASE11Q8TAA1 199 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-201ENST00000291842 ASCL3Q9NQ33 180 aa15.52■□□□□ 0.08
SHKBP1-201ENST00000291842 CLEC18AA5D8T8 446 aa15.51■□□□□ 0.07
SHKBP1-201ENST00000291842 GPR37O15354 613 aa15.51■□□□□ 0.07
SHKBP1-201ENST00000291842 PITX3O75364 302 aa15.51■□□□□ 0.07
SHKBP1-201ENST00000291842 RAC2P15153 192 aa15.51■□□□□ 0.07
SHKBP1-201ENST00000291842 KIR2DL2P43627 348 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-201ENST00000291842 FAM53AQ6NSI3 398 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-201ENST00000291842 CLEC18CQ8NCF0 446 aa15.51■□□□□ 0.07
SHKBP1-201ENST00000291842 SCRT1Q9BWW7 348 aa15.51■□□□□ 0.07
SHKBP1-201ENST00000291842 SLC25A31Q9H0C2 315 aa15.51■□□□□ 0.07
SHKBP1-201ENST00000291842 PRELID1Q9Y255 219 aa15.51■□□□□ 0.07
SHKBP1-201ENST00000291842 FBXO7Q9Y3I1 522 aa15.51■□□□□ 0.07
SHKBP1-201ENST00000291842 DIDO1Q9BTC0 2240 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-201ENST00000291842 WDR1O75083 606 aa15.51■□□□□ 0.07
SHKBP1-201ENST00000291842 TSPAN9O75954 239 aa15.51■□□□□ 0.07
SHKBP1-201ENST00000291842 CEACAM6P40199 344 aa15.51■□□□□ 0.07
SHKBP1-201ENST00000291842 RUNX1Q01196 453 aa15.51■□□□□ 0.07
SHKBP1-201ENST00000291842 ZNF266Q14584 549 aa15.51■□□□□ 0.07
SHKBP1-201ENST00000291842 RNF115Q9Y4L5 304 aa15.51■□□□□ 0.07
SHKBP1-201ENST00000291842 DUXBA0A1W2PPF3 345 aa15.5■□□□□ 0.07
SHKBP1-201ENST00000291842 IQCF6A8MYZ5 107 aa15.5■□□□□ 0.07
SHKBP1-201ENST00000291842 SH2D1BO14796 132 aa15.5■□□□□ 0.07
SHKBP1-201ENST00000291842 MLNRO43193 412 aa15.5■□□□□ 0.07
SHKBP1-201ENST00000291842 PSPNO60542 156 aa15.5■□□□□ 0.07
SHKBP1-201ENST00000291842 IGKV1-39P01597 117 aa15.5■□□□□ 0.07
SHKBP1-201ENST00000291842 IGKV1D-39P04432 117 aa15.5■□□□□ 0.07
SHKBP1-201ENST00000291842 PAX9P55771 341 aa15.5■□□□□ 0.07
SHKBP1-201ENST00000291842 MEX3AA1L020 520 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-201ENST00000291842 CNOT4O95628 575 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-201ENST00000291842 DEFB109BQ30KR1 87 aa15.5■□□□□ 0.07
SHKBP1-201ENST00000291842 INO80CQ6PI98 192 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-201ENST00000291842 Q8IYB0 196 aa15.5■□□□□ 0.07
SHKBP1-201ENST00000291842 OR10Z1Q8NGY1 313 aa15.5■□□□□ 0.07
SHKBP1-201ENST00000291842 NDRG3Q9UGV2 375 aa15.5■□□□□ 0.07
SHKBP1-201ENST00000291842 J3QW42 95 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 K7N7A8 449 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 H2AFB1P0C5Y9 115 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 CD82P27701 267 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 HOXC12P31275 282 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 MDH2P40926 338 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 CCL20P78556 96 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 ZNF146Q15072 292 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 WDR31Q8NA23 367 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 IL22RA2Q969J5 263 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 C20orf24Q9BUV8 137 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms