RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 DUX4L9Q6RFH8 374 aaPredicted RBP13.99□□□□□ -0.17
HIF3A-203ENST00000291300 ALKAL2Q6UX46 152 aa13.99□□□□□ -0.17
HIF3A-203ENST00000291300 OR1S1Q8NH92 325 aa13.99□□□□□ -0.17
HIF3A-203ENST00000291300 LILRB1Q8NHL6 650 aaPredicted RBP13.99□□□□□ -0.17
HIF3A-203ENST00000291300 MRGPRDQ8TDS7 321 aa13.99□□□□□ -0.17
HIF3A-203ENST00000291300 SUCNR1Q9BXA5 334 aa13.99□□□□□ -0.17
HIF3A-203ENST00000291300 ESRP2Q9H6T0 727 aaKnown RBP13.99□□□□□ -0.17
HIF3A-203ENST00000291300 GCM1Q9NP62 436 aa13.99□□□□□ -0.17
HIF3A-203ENST00000291300 DUX4Q9UBX2 424 aa13.99□□□□□ -0.17
HIF3A-203ENST00000291300 GLS2Q9UI32 602 aa13.99□□□□□ -0.17
HIF3A-203ENST00000291300 CYB5R3P00387 301 aaPredicted RBP13.99□□□□□ -0.17
HIF3A-203ENST00000291300 LHBP01229 141 aa13.99□□□□□ -0.17
HIF3A-203ENST00000291300 OR4A8P0C604 315 aa13.99□□□□□ -0.17
HIF3A-203ENST00000291300 S100A10P60903 97 aa13.99□□□□□ -0.17
HIF3A-203ENST00000291300 TNFAIP6P98066 277 aaPredicted RBP13.99□□□□□ -0.17
HIF3A-203ENST00000291300 CYCSP99999 105 aaKnown RBP13.99□□□□□ -0.17
HIF3A-203ENST00000291300 GNMTQ14749 295 aa13.99□□□□□ -0.17
HIF3A-203ENST00000291300 ACOT7LQ6ZUV0 252 aa13.99□□□□□ -0.17
HIF3A-203ENST00000291300 MOB1BQ7L9L4 216 aa13.99□□□□□ -0.17
HIF3A-203ENST00000291300 SLC35G3Q8N808 338 aa13.99□□□□□ -0.17
HIF3A-203ENST00000291300 CCDC71LQ8N9Z2 235 aa13.99□□□□□ -0.17
HIF3A-203ENST00000291300 OR13A1Q8NGR1 328 aa13.99□□□□□ -0.17
HIF3A-203ENST00000291300 RAI1Q7Z5J4 1906 aaPredicted RBP13.98□□□□□ -0.17
HIF3A-203ENST00000291300 CCL21O00585 134 aa13.98□□□□□ -0.17
HIF3A-203ENST00000291300 PGLYRP1O75594 196 aaPredicted RBP13.98□□□□□ -0.17
HIF3A-203ENST00000291300 HEXAP06865 529 aa13.98□□□□□ -0.17
HIF3A-203ENST00000291300 GABRA2P47869 451 aa13.98□□□□□ -0.17
HIF3A-203ENST00000291300 MZT1Q08AG7 82 aa13.98□□□□□ -0.17
HIF3A-203ENST00000291300 EDDM3AQ14507 147 aa13.98□□□□□ -0.17
HIF3A-203ENST00000291300 KRBOX4Q5JUW0 171 aa13.98□□□□□ -0.17
HIF3A-203ENST00000291300 SLC35E4Q6ICL7 350 aa13.98□□□□□ -0.17
HIF3A-203ENST00000291300 DMRTC2Q8IXT2 367 aaPredicted RBP13.98□□□□□ -0.17
HIF3A-203ENST00000291300 LRTM2Q8N967 370 aa13.98□□□□□ -0.17
HIF3A-203ENST00000291300 ZNRF1Q8ND25 227 aa13.98□□□□□ -0.17
HIF3A-203ENST00000291300 OR52L2PQ8NGH6 319 aa13.98□□□□□ -0.17
HIF3A-203ENST00000291300 OR52M1Q8NGK5 317 aa13.98□□□□□ -0.17
HIF3A-203ENST00000291300 TMEM222Q9H0R3 208 aa13.98□□□□□ -0.17
HIF3A-203ENST00000291300 UBQLN2Q9UHD9 624 aa13.98□□□□□ -0.17
HIF3A-203ENST00000291300 TPRP12270 2363 aaKnown RBP13.98□□□□□ -0.17
HIF3A-203ENST00000291300 DYSFO75923 2080 aa13.98□□□□□ -0.17
HIF3A-203ENST00000291300 DIDO1Q9BTC0 2240 aaKnown RBP13.98□□□□□ -0.17
HIF3A-203ENST00000291300 NPIPB11E5RHQ5 1161 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 H7C1Q1 480 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 IFNL4K9M1U5 179 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 IFNA7P01567 189 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 RLN2P04090 185 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 SSTR5P35346 364 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 CFHR2P36980 270 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 CEACAM6P40199 344 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 RND3P61587 244 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 ZNF345Q14585 488 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 TMEM268Q5VZI3 342 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 PRSS54Q6PEW0 395 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 ST6GALNAC3Q8NDV1 305 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 OR10V1Q8NGI7 309 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 OR10Z1Q8NGY1 313 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 PRORYQ9H606 182 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 DNAJB11Q9UBS4 358 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 POM121CA8CG34 1229 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 HSPA12AO43301 675 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 CCL8P80075 99 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 ADORA2A-AS1P86434 159 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 LINC01560Q8TB33 94 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 FBXO9Q9UK97 447 aaPredicted RBP13.97□□□□□ -0.17
HIF3A-203ENST00000291300 MAB21L2Q9Y586 359 aa13.97□□□□□ -0.17
HIF3A-203ENST00000291300 A0A0D9SG52 128 aa13.96□□□□□ -0.17
HIF3A-203ENST00000291300 SHISA9B4DS77 424 aa13.96□□□□□ -0.17
HIF3A-203ENST00000291300 OR2F2O95006 317 aa13.96□□□□□ -0.17
HIF3A-203ENST00000291300 SCGB1D2O95969 90 aa13.96□□□□□ -0.17
HIF3A-203ENST00000291300 HBZP02008 142 aa13.96□□□□□ -0.17
HIF3A-203ENST00000291300 OR8U9P0C7N5 309 aa13.96□□□□□ -0.17
HIF3A-203ENST00000291300 LYL1P12980 280 aa13.96□□□□□ -0.17
HIF3A-203ENST00000291300 GATA4P43694 442 aa13.96□□□□□ -0.17
HIF3A-203ENST00000291300 OR2F1Q13607 317 aa13.96□□□□□ -0.17
HIF3A-203ENST00000291300 C6orf183Q5T699 404 aa13.96□□□□□ -0.17
HIF3A-203ENST00000291300 SELENOHQ8IZQ5 122 aaKnown RBP13.96□□□□□ -0.17
HIF3A-203ENST00000291300 LGI3Q8N145 548 aa13.96□□□□□ -0.17
HIF3A-203ENST00000291300 OR8U1Q8NH10 309 aa13.96□□□□□ -0.17
HIF3A-203ENST00000291300 OR51H1Q8NH63 302 aa13.96□□□□□ -0.17
HIF3A-203ENST00000291300 RFESDQ8TAC1 157 aa13.96□□□□□ -0.17
HIF3A-203ENST00000291300 ITGB1BP2Q9UKP3 347 aa13.96□□□□□ -0.17
HIF3A-203ENST00000291300 PPP1R3CQ9UQK1 317 aa13.96□□□□□ -0.17
HIF3A-203ENST00000291300 UBE2J1Q9Y385 318 aaPredicted RBP13.96□□□□□ -0.17
HIF3A-203ENST00000291300 IGHV3-43A0A0B4J1X8 118 aa13.96□□□□□ -0.18
HIF3A-203ENST00000291300 IFNA21P01568 189 aa13.96□□□□□ -0.18
HIF3A-203ENST00000291300 IGHV3-43DP0DP04 118 aa13.96□□□□□ -0.18
HIF3A-203ENST00000291300 C4BPBP20851 252 aa13.96□□□□□ -0.18
HIF3A-203ENST00000291300 SELENOVP59797 346 aa13.96□□□□□ -0.18
HIF3A-203ENST00000291300 FAM185AQ8N0U4 392 aa13.96□□□□□ -0.18
HIF3A-203ENST00000291300 DEFB108BQ8NET1 73 aa13.96□□□□□ -0.18
HIF3A-203ENST00000291300 C5orf30Q96GV9 206 aa13.96□□□□□ -0.18
HIF3A-203ENST00000291300 CNTNAP3BQ96NU0 1288 aa13.96□□□□□ -0.18
HIF3A-203ENST00000291300 CNTNAP3Q9BZ76 1288 aa13.96□□□□□ -0.18
HIF3A-203ENST00000291300 IL19Q9UHD0 177 aa13.96□□□□□ -0.18
HIF3A-203ENST00000291300 RNF150Q9ULK6 438 aa13.96□□□□□ -0.18
HIF3A-203ENST00000291300 BCL2L11O43521 198 aa13.95□□□□□ -0.18
HIF3A-203ENST00000291300 PLAUP00749 431 aa13.95□□□□□ -0.18
HIF3A-203ENST00000291300 MBPP02686 304 aaPredicted RBP13.95□□□□□ -0.18
HIF3A-203ENST00000291300 LUMP51884 338 aaPredicted RBP13.95□□□□□ -0.18
HIF3A-203ENST00000291300 C1QTNF12Q5T7M4 302 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms