RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 PTX4Q96A99 478 aa16.08■□□□□ 0.16
PCDH1-201ENST00000287008 POMT1Q9Y6A1 747 aa16.08■□□□□ 0.16
PCDH1-201ENST00000287008 IGLV1-36A0A0B4J1U3 117 aa16.07■□□□□ 0.16
PCDH1-201ENST00000287008 A0A1W2PPE3 182 aa16.07■□□□□ 0.16
PCDH1-201ENST00000287008 FAM87AP0C7U9 286 aa16.07■□□□□ 0.16
PCDH1-201ENST00000287008 IGKV3-7A0A075B6H7 116 aa16.07■□□□□ 0.16
PCDH1-201ENST00000287008 F5H697 171 aa16.07■□□□□ 0.16
PCDH1-201ENST00000287008 SYNGR3O43761 229 aa16.07■□□□□ 0.16
PCDH1-201ENST00000287008 CDS2O95674 445 aa16.07■□□□□ 0.16
PCDH1-201ENST00000287008 AKIRIN1Q9H9L7 192 aaPredicted RBP16.07■□□□□ 0.16
PCDH1-201ENST00000287008 GAPDHP04406 335 aaKnown RBP16.07■□□□□ 0.16
PCDH1-201ENST00000287008 HLA-GP17693 338 aa16.07■□□□□ 0.16
PCDH1-201ENST00000287008 ABHD14AQ9BUJ0 271 aa16.07■□□□□ 0.16
PCDH1-201ENST00000287008 TMEM33P57088 247 aa16.06■□□□□ 0.16
PCDH1-201ENST00000287008 DHRS7BQ6IAN0 325 aaPredicted RBP16.06■□□□□ 0.16
PCDH1-201ENST00000287008 ZNF826PQ6ZT77 177 aa16.06■□□□□ 0.16
PCDH1-201ENST00000287008 DYRK2Q92630 601 aa16.06■□□□□ 0.16
PCDH1-201ENST00000287008 ZNF586Q9NXT0 402 aa16.06■□□□□ 0.16
PCDH1-201ENST00000287008 SBF2Q86WG5 1849 aa16.06■□□□□ 0.16
PCDH1-201ENST00000287008 CREBBPQ92793 2442 aa16.06■□□□□ 0.16
PCDH1-201ENST00000287008 COX5BP10606 129 aa16.06■□□□□ 0.16
PCDH1-201ENST00000287008 RPS4Y1P22090 263 aaKnown RBP16.06■□□□□ 0.16
PCDH1-201ENST00000287008 NPY1RP25929 384 aa16.06■□□□□ 0.16
PCDH1-201ENST00000287008 MMP24Q9Y5R2 645 aa16.06■□□□□ 0.16
PCDH1-201ENST00000287008 PAFAH1B2P68402 229 aa16.06■□□□□ 0.16
PCDH1-201ENST00000287008 ABHD17AQ96GS6 310 aa16.06■□□□□ 0.16
PCDH1-201ENST00000287008 IGF2P01344 180 aa16.06■□□□□ 0.16
PCDH1-201ENST00000287008 DAOP14920 347 aa16.06■□□□□ 0.16
PCDH1-201ENST00000287008 DYNLRB2Q8TF09 96 aa16.06■□□□□ 0.16
PCDH1-201ENST00000287008 GP6Q9HCN6 339 aa16.06■□□□□ 0.16
PCDH1-201ENST00000287008 TECRQ9NZ01 308 aaKnown RBP16.06■□□□□ 0.16
PCDH1-201ENST00000287008 J3QR06 171 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 GCM2O75603 506 aaPredicted RBP16.05■□□□□ 0.16
PCDH1-201ENST00000287008 HOGA1Q86XE5 327 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 FAM219AQ8IW50 185 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 NAGKQ9UJ70 344 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 GOLT1BQ9Y3E0 138 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 TRBV23-1A0A0A0MS06 115 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 RNASEK-C17orf49H0YIS7 233 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 ADAM10O14672 748 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 HSBP1O75506 76 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 CD1AP06126 327 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 PDPNQ86YL7 162 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 CRIPAKQ8N1N5 446 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 GCSAMQ8N6F7 178 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 SNX22Q96L94 193 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 TMEM167BQ9NRX6 74 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 DSPPQ9NZW4 1301 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 AMELYQ99218 206 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 RSRP1Q9BUV0 290 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 PLSCR3Q9NRY6 295 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 HILPDAQ9Y5L2 63 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 MYO16Q9Y6X6 1858 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 ZNF716A6NP11 495 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 ZNHIT1O43257 154 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 OR2J3O76001 311 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 FSTP19883 344 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 FCER1GP30273 86 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 MC5RP33032 325 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 GNG4P50150 75 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 NSUN5P2Q63ZY6 315 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 HDHD3Q9BSH5 251 aaPredicted RBP16.05■□□□□ 0.16
PCDH1-201ENST00000287008 SRXN1Q9BYN0 137 aa16.05■□□□□ 0.16
PCDH1-201ENST00000287008 ZNF429Q86V71 674 aa16.04■□□□□ 0.16
PCDH1-201ENST00000287008 SLC25A42Q86VD7 318 aa16.04■□□□□ 0.16
PCDH1-201ENST00000287008 KLF14Q8TD94 323 aaPredicted RBP16.04■□□□□ 0.16
PCDH1-201ENST00000287008 SIGLEC12Q96PQ1 595 aa16.04■□□□□ 0.16
PCDH1-201ENST00000287008 RBM38Q9H0Z9 239 aaKnown RBP16.04■□□□□ 0.16
PCDH1-201ENST00000287008 FAM78BQ5VT40 261 aa16.04■□□□□ 0.16
PCDH1-201ENST00000287008 Q6ZT83 130 aa16.04■□□□□ 0.16
PCDH1-201ENST00000287008 SIGLECL1Q8N7X8 197 aa16.04■□□□□ 0.16
PCDH1-201ENST00000287008 LHFPL6Q9Y693 200 aa16.04■□□□□ 0.16
PCDH1-201ENST00000287008 ARG1P05089 322 aa16.04■□□□□ 0.16
PCDH1-201ENST00000287008 G6PCP35575 357 aa16.04■□□□□ 0.16
PCDH1-201ENST00000287008 EFNB2P52799 333 aa16.03■□□□□ 0.16
PCDH1-201ENST00000287008 TEX261Q6UWH6 196 aa16.03■□□□□ 0.16
PCDH1-201ENST00000287008 SEZ6L2Q6UXD5 910 aa16.03■□□□□ 0.16
PCDH1-201ENST00000287008 MUC15Q8N387 334 aa16.03■□□□□ 0.16
PCDH1-201ENST00000287008 MRPL24Q96A35 216 aaKnown RBP16.03■□□□□ 0.16
PCDH1-201ENST00000287008 PRR13Q9NZ81 148 aa16.03■□□□□ 0.16
PCDH1-201ENST00000287008 U3KQ87 197 aa16.03■□□□□ 0.16
PCDH1-201ENST00000287008 SCN2AQ99250 2005 aa16.03■□□□□ 0.16
PCDH1-201ENST00000287008 APELAP0DMC3 54 aa16.03■□□□□ 0.16
PCDH1-201ENST00000287008 P2RY1P47900 373 aa16.03■□□□□ 0.16
PCDH1-201ENST00000287008 PIMREGQ9BSJ6 248 aa16.03■□□□□ 0.16
PCDH1-201ENST00000287008 ASCL3Q9NQ33 180 aa16.03■□□□□ 0.16
PCDH1-201ENST00000287008 RABAC1Q9UI14 185 aa16.03■□□□□ 0.16
PCDH1-201ENST00000287008 HBZP02008 142 aa16.03■□□□□ 0.16
PCDH1-201ENST00000287008 ZNF703Q9H7S9 590 aaPredicted RBP16.03■□□□□ 0.16
PCDH1-201ENST00000287008 SIRT4Q9Y6E7 314 aaPredicted RBP16.03■□□□□ 0.16
PCDH1-201ENST00000287008 A0A1B0GU03 582 aa16.03■□□□□ 0.16
PCDH1-201ENST00000287008 RFPL3SP0C7P2 107 aa16.03■□□□□ 0.16
PCDH1-201ENST00000287008 CPN1P15169 458 aa16.03■□□□□ 0.16
PCDH1-201ENST00000287008 RPL27AP46776 148 aaKnown RBP16.03■□□□□ 0.16
PCDH1-201ENST00000287008 CEBPEQ15744 281 aa16.03■□□□□ 0.16
PCDH1-201ENST00000287008 MYPOPQ86VE0 399 aaPredicted RBP16.03■□□□□ 0.16
PCDH1-201ENST00000287008 SSMEM1Q8WWF3 244 aa16.03■□□□□ 0.16
PCDH1-201ENST00000287008 PKIBQ9C010 78 aa16.03■□□□□ 0.16
PCDH1-201ENST00000287008 ZNF737O75373 536 aa16.02■□□□□ 0.16
PCDH1-201ENST00000287008 TNFSF10P50591 281 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms