RNA–Protein interactions for RNA: ENST00000285679.10

USP25-201, Transcript of ubiquitin specific peptidase 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP25, Length 3,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-201ENST00000285679 IL36RNQ9UBH0 155 aa13.21□□□□□ -0.29
USP25-201ENST00000285679 PAM16Q9Y3D7 125 aa13.21□□□□□ -0.29
USP25-201ENST00000285679 AQP7P3A6NL99 342 aa13.21□□□□□ -0.3
USP25-201ENST00000285679 PROB1E7EW31 1015 aa13.21□□□□□ -0.3
USP25-201ENST00000285679 PPIHO43447 177 aaKnown RBP13.21□□□□□ -0.3
USP25-201ENST00000285679 GDF1P27539 372 aa13.21□□□□□ -0.3
USP25-201ENST00000285679 CCR5P51681 352 aa13.21□□□□□ -0.3
USP25-201ENST00000285679 IL24Q13007 206 aa13.21□□□□□ -0.3
USP25-201ENST00000285679 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.21□□□□□ -0.3
USP25-201ENST00000285679 RHBDD1Q8TEB9 315 aa13.21□□□□□ -0.3
USP25-201ENST00000285679 FOXB1Q99853 325 aa13.21□□□□□ -0.3
USP25-201ENST00000285679 FBLN5Q9UBX5 448 aa13.21□□□□□ -0.3
USP25-201ENST00000285679 NOSIPQ9Y314 301 aaKnown RBP13.21□□□□□ -0.3
USP25-201ENST00000285679 TRAPPC1Q9Y5R8 145 aa13.21□□□□□ -0.3
USP25-201ENST00000285679 H0Y8G0 127 aa13.2□□□□□ -0.3
USP25-201ENST00000285679 CST2P09228 141 aa13.2□□□□□ -0.3
USP25-201ENST00000285679 PNRC1Q12796 327 aaPredicted RBP13.2□□□□□ -0.3
USP25-201ENST00000285679 IQCJQ1A5X6 159 aa13.2□□□□□ -0.3
USP25-201ENST00000285679 CXorf67Q86X51 503 aaPredicted RBP13.2□□□□□ -0.3
USP25-201ENST00000285679 OR4X1Q8NH49 305 aa13.2□□□□□ -0.3
USP25-201ENST00000285679 CLDND2Q8NHS1 167 aa13.2□□□□□ -0.3
USP25-201ENST00000285679 SYNGR2O43760 224 aa13.2□□□□□ -0.3
USP25-201ENST00000285679 GDF9O60383 454 aa13.2□□□□□ -0.3
USP25-201ENST00000285679 MRPL33O75394 65 aaKnown RBP13.2□□□□□ -0.3
USP25-201ENST00000285679 CD55P08174 381 aa13.2□□□□□ -0.3
USP25-201ENST00000285679 DEFA4P12838 97 aa13.2□□□□□ -0.3
USP25-201ENST00000285679 CD33P20138 364 aa13.2□□□□□ -0.3
USP25-201ENST00000285679 PAX5Q02548 391 aa13.2□□□□□ -0.3
USP25-201ENST00000285679 IGFBP7Q16270 282 aa13.2□□□□□ -0.3
USP25-201ENST00000285679 CALHM1Q8IU99 346 aa13.2□□□□□ -0.3
USP25-201ENST00000285679 OR2M3Q8NG83 312 aa13.2□□□□□ -0.3
USP25-201ENST00000285679 C12orf49Q9H741 205 aa13.2□□□□□ -0.3
USP25-201ENST00000285679 AKIRIN1Q9H9L7 192 aaPredicted RBP13.2□□□□□ -0.3
USP25-201ENST00000285679 USF3Q68DE3 2245 aa13.2□□□□□ -0.3
USP25-201ENST00000285679 MDH2P40926 338 aaKnown RBP13.2□□□□□ -0.3
USP25-201ENST00000285679 SELENOHQ8IZQ5 122 aaKnown RBP13.2□□□□□ -0.3
USP25-201ENST00000285679 OR2T10Q8NGZ9 312 aa13.2□□□□□ -0.3
USP25-201ENST00000285679 ELOVL1Q9BW60 279 aa13.2□□□□□ -0.3
USP25-201ENST00000285679 VAX2Q9UIW0 290 aa13.2□□□□□ -0.3
USP25-201ENST00000285679 TIAF1O95411 115 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 GRPP07492 148 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 SLC38A11Q08AI6 406 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 IL15RAQ13261 267 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 POC1BQ8TC44 478 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 MRPL30Q8TCC3 161 aaKnown RBP13.19□□□□□ -0.3
USP25-201ENST00000285679 GTF3AQ92664 365 aaKnown RBP13.19□□□□□ -0.3
USP25-201ENST00000285679 PARD6AQ9NPB6 346 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 RYDENQ9NUL5 291 aaKnown RBP13.19□□□□□ -0.3
USP25-201ENST00000285679 PAGE4O60829 102 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 NTF3P20783 257 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 RFESDQ8TAC1 157 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 PRDM13Q9H4Q3 707 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 ZDHHC11Q9H8X9 412 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 CELSR3Q9NYQ7 3312 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 A0A0U1RQV5 110 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 MDFIC2A0A1B0GVS7 189 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 LRRC3CA6NJW4 275 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 FAM157AC9JC47 383 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 M0R143 59 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 CCL3P10147 92 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 PLGLB1Q02325 96 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 COL13A1Q5TAT6 717 aaPredicted RBP13.19□□□□□ -0.3
USP25-201ENST00000285679 OIT3Q8WWZ8 545 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 FKBP11Q9NYL4 201 aa13.19□□□□□ -0.3
USP25-201ENST00000285679 IGKV1D-13A0A0B4J2D9 117 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 EPOPA6NHQ4 379 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 IGKV1-13P0DP09 117 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 RBM11P57052 281 aaKnown RBP13.18□□□□□ -0.3
USP25-201ENST00000285679 ZNF506Q5JVG8 444 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 CPT1CQ8TCG5 803 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 NAT8Q9UHE5 227 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 IFITM10A6NMD0 228 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 VAMP5O95183 116 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 RAC2P15153 192 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 EIF3IQ13347 325 aaKnown RBP13.18□□□□□ -0.3
USP25-201ENST00000285679 ENDOGQ14249 297 aaKnown RBP13.18□□□□□ -0.3
USP25-201ENST00000285679 RAB35Q15286 201 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 FFAR4Q5NUL3 377 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 SPSB3Q6PJ21 355 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 OR10V1Q8NGI7 309 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 SMDT1Q9H4I9 107 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 ANKRD30BLA7E2S9 258 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 B4DEV8 164 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 SSR4P51571 173 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 KRTDAPP60985 99 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 WIPI1Q5MNZ9 446 aaPredicted RBP13.18□□□□□ -0.3
USP25-201ENST00000285679 RPS19BP1Q86WX3 136 aaKnown RBP13.18□□□□□ -0.3
USP25-201ENST00000285679 CLDN23Q96B33 292 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 FREM1Q5H8C1 2179 aa13.18□□□□□ -0.3
USP25-201ENST00000285679 LOC102724200A0A096LPH7 203 aaPredicted RBP13.17□□□□□ -0.3
USP25-201ENST00000285679 IGKV1-12A0A0C4DH73 117 aa13.17□□□□□ -0.3
USP25-201ENST00000285679 LOC102723971A0A1B0GUV8 181 aa13.17□□□□□ -0.3
USP25-201ENST00000285679 GRIFINA4D1Z8 144 aa13.17□□□□□ -0.3
USP25-201ENST00000285679 DEGS1O15121 323 aa13.17□□□□□ -0.3
USP25-201ENST00000285679 IGKV1D-12P01611 117 aa13.17□□□□□ -0.3
USP25-201ENST00000285679 EDDM3BP56851 147 aa13.17□□□□□ -0.3
USP25-201ENST00000285679 DBX2Q6ZNG2 339 aa13.17□□□□□ -0.3
USP25-201ENST00000285679 LYPD6Q86Y78 171 aa13.17□□□□□ -0.3
USP25-201ENST00000285679 H1FOOQ8IZA3 346 aaPredicted RBP13.17□□□□□ -0.3
USP25-201ENST00000285679 GPR146Q96CH1 333 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms