RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 CLEC18BQ6UXF7 455 aa17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 ZNF497Q6ZNH5 498 aa17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 C5orf24Q7Z6I8 188 aa17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 MOGAT3Q86VF5 341 aa17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 BAP18Q8IXM2 172 aa17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 PRR7Q8TB68 274 aa17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 RNF141Q8WVD5 230 aa17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 NKX6-2Q9C056 277 aaPredicted RBP17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 SRRM5B3KS81 715 aa17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 DNASE2O00115 360 aaPredicted RBP17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 TSPAN9O75954 239 aa17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 ZNF728P0DKX0 622 aa17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 GATA4P43694 442 aa17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 TNFAIP6P98066 277 aaPredicted RBP17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 GAPTQ8N292 157 aa17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 TOMM40LQ969M1 308 aa17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 ARL11Q969Q4 196 aa17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 MOB3AQ96BX8 217 aa17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 NARS2Q96I59 477 aaKnown RBP17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 NDRG3Q9UGV2 375 aa17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 IL19Q9UHD0 177 aa17.3■□□□□ 0.36
LYSMD2-201ENST00000267838 PSPNO60542 156 aa17.29■□□□□ 0.36
LYSMD2-201ENST00000267838 CTXN2P0C2S0 81 aa17.29■□□□□ 0.36
LYSMD2-201ENST00000267838 EGR1P18146 543 aa17.29■□□□□ 0.36
LYSMD2-201ENST00000267838 RCC1P18754 421 aaPredicted RBP17.29■□□□□ 0.36
LYSMD2-201ENST00000267838 RBMXP38159 391 aaKnown RBP17.29■□□□□ 0.36
LYSMD2-201ENST00000267838 FXYD4P59646 89 aa17.29■□□□□ 0.36
LYSMD2-201ENST00000267838 EIF5AP63241 154 aaKnown RBP17.29■□□□□ 0.36
LYSMD2-201ENST00000267838 SUPT4H1P63272 117 aaKnown RBP17.29■□□□□ 0.36
LYSMD2-201ENST00000267838 HLA-DRB3P79483 266 aa17.29■□□□□ 0.36
LYSMD2-201ENST00000267838 HERPUD1Q15011 391 aa17.29■□□□□ 0.36
LYSMD2-201ENST00000267838 PLPPR2Q96GM1 343 aa17.29■□□□□ 0.36
LYSMD2-201ENST00000267838 DNAJB11Q9UBS4 358 aa17.29■□□□□ 0.36
LYSMD2-201ENST00000267838 IFNL4K9M1U5 179 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 AADACP22760 399 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 TNFSF4P23510 183 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 MOB1BQ7L9L4 216 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 CLRN3Q8NCR9 226 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 OR1S2Q8NGQ3 325 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 LINC01560Q8TB33 94 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 CA5BP1Q8WTZ4 195 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 C2orf50Q96LR7 162 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 RNF126Q9BV68 326 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 ERRFI1Q9UJM3 462 aaPredicted RBP17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 VSTM5A8MXK1 200 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 SHISA9B4DS77 424 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 TK1P04183 234 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 GRNP28799 593 aaKnown RBP17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 UCP3P55916 312 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 HERV-K104P61576 105 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 CDSNQ15517 529 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 SLC9A3R2Q15599 337 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 ATRAIDQ6UW56 229 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 FAM90A1Q86YD7 464 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 GCSAMQ8N6F7 178 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 OR4A4PQ8NGN8 299 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 AQP10Q96PS8 301 aa17.28■□□□□ 0.36
LYSMD2-201ENST00000267838 IGKV1-6A0A0C4DH72 117 aa17.27■□□□□ 0.35
LYSMD2-201ENST00000267838 TMEM218A2RU14 115 aa17.27■□□□□ 0.35
LYSMD2-201ENST00000267838 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.27■□□□□ 0.35
LYSMD2-201ENST00000267838 ATG12O94817 140 aa17.27■□□□□ 0.35
LYSMD2-201ENST00000267838 PPYP01298 95 aa17.27■□□□□ 0.35
LYSMD2-201ENST00000267838 RPS2P15880 293 aaKnown RBP17.27■□□□□ 0.35
LYSMD2-201ENST00000267838 DMRTC2Q8IXT2 367 aaPredicted RBP17.27■□□□□ 0.35
LYSMD2-201ENST00000267838 SVBPQ8N300 66 aa17.27■□□□□ 0.35
LYSMD2-201ENST00000267838 BOLLQ8N9W6 283 aaKnown RBP17.27■□□□□ 0.35
LYSMD2-201ENST00000267838 KCNJ16Q9NPI9 418 aa17.27■□□□□ 0.35
LYSMD2-201ENST00000267838 TRAPPC2LQ9UL33 140 aa17.27■□□□□ 0.35
LYSMD2-201ENST00000267838 WIPI2Q9Y4P8 454 aa17.27■□□□□ 0.35
LYSMD2-201ENST00000267838 DIRAS3O95661 229 aa17.26■□□□□ 0.35
LYSMD2-201ENST00000267838 LHBP01229 141 aa17.26■□□□□ 0.35
LYSMD2-201ENST00000267838 TFF1P04155 84 aa17.26■□□□□ 0.35
LYSMD2-201ENST00000267838 COL10A1Q03692 680 aa17.26■□□□□ 0.35
LYSMD2-201ENST00000267838 IL34Q6ZMJ4 242 aa17.26■□□□□ 0.35
LYSMD2-201ENST00000267838 METTL8Q9H825 291 aaKnown RBP17.26■□□□□ 0.35
LYSMD2-201ENST00000267838 CYTL1Q9NRR1 136 aa17.26■□□□□ 0.35
LYSMD2-201ENST00000267838 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 TAAR5O14804 337 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 CD3EP07766 207 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 ABCA11PQ4W5N1 156 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 EIF5AL1Q6IS14 154 aaKnown RBP17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 CD177Q8N6Q3 437 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 DIRC2Q96SL1 478 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 TSNAXQ99598 290 aaKnown RBP17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 GCM1Q9NP62 436 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 MMP26Q9NRE1 261 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 METRNQ9UJH8 293 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 PLCE1Q9P212 2302 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 TRAV39A0A0B4J263 110 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 TMEM30CPA0ZSE6 113 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 CRYM-AS1A6NIL9 109 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 E7EQL1 145 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 H0YIZ8 118 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 ADH4P08319 380 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 PSG2P11465 335 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 PRDX2P32119 198 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 OR3A1P47881 315 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 KCNJ3P48549 501 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 PIGPP57054 158 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 ANKRD55Q3KP44 614 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms