RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 ASCL5Q7RTU5 278 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 DTD1Q8TEA8 209 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 WIPI2Q9Y4P8 454 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 FAM157AC9JC47 383 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 ATP6V1G2-DDX39BF2Z307 99 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 H3F3AP84243 136 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 FAM3AP98173 230 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 ZNF658BQ4V348 819 aaPredicted RBP13.35□□□□□ -0.27
TIMP3-201ENST00000266085 OR1K1Q8NGR3 316 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 SLC25A38Q96DW6 304 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 G3V3Q6 166 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 CD200P41217 278 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 LYPD8Q6UX82 237 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 UNQ9370/PRO34162Q6UXP9 181 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 TPRX1Q8N7U7 411 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 SLC25A22Q9H936 323 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 OR1A1Q9P1Q5 309 aa13.35□□□□□ -0.27
TIMP3-201ENST00000266085 MED19A0JLT2 244 aaPredicted RBP13.34□□□□□ -0.27
TIMP3-201ENST00000266085 DHRS7CA6NNS2 312 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 CTRB1P17538 263 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 BRS3P32247 399 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 SNAI3Q3KNW1 292 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 CTRB2Q6GPI1 263 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 FDX2Q6P4F2 183 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 NFAM1Q8NET5 270 aaPredicted RBP13.34□□□□□ -0.27
TIMP3-201ENST00000266085 HEXA-AS1Q9H8Q6 139 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 PIPOXQ9P0Z9 390 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 PPIAL4EA0A075B759 164 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 PPIAL4DF5H284 164 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 PPIAL4FP0DN26 164 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 FABP9Q0Z7S8 132 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 TNXAQ16473 311 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 ZNF260Q3ZCT1 412 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 OR10G4Q8NGN3 311 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 OR10G9Q8NGN4 311 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 OR10G7Q8NGN6 311 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 SLC35B3Q9H1N7 401 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 AAMDCQ9H7C9 122 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 VSIG4Q9Y279 399 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 PPIAL4AQ9Y536 164 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 NKX2-6A6NCS4 301 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 MGST3O14880 152 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 SOX15O60248 233 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 PRF1P14222 555 aa13.34□□□□□ -0.27
TIMP3-201ENST00000266085 ZNF703Q9H7S9 590 aaPredicted RBP13.34□□□□□ -0.27
TIMP3-201ENST00000266085 C9orf172C9J069 976 aa13.33□□□□□ -0.27
TIMP3-201ENST00000266085 ZP3P21754 424 aa13.33□□□□□ -0.27
TIMP3-201ENST00000266085 DYNLT3P51808 116 aa13.33□□□□□ -0.27
TIMP3-201ENST00000266085 ZNF320A2RRD8 509 aa13.33□□□□□ -0.28
TIMP3-201ENST00000266085 ERVFC1-1P60608 527 aa13.33□□□□□ -0.28
TIMP3-201ENST00000266085 MOGAT2Q3SYC2 334 aa13.33□□□□□ -0.28
TIMP3-201ENST00000266085 PDZD11Q5EBL8 140 aa13.33□□□□□ -0.28
TIMP3-201ENST00000266085 C9orf62Q8N4C0 152 aa13.33□□□□□ -0.28
TIMP3-201ENST00000266085 MESP1Q9BRJ9 268 aa13.33□□□□□ -0.28
TIMP3-201ENST00000266085 ZNF785A8K8V0 405 aa13.33□□□□□ -0.28
TIMP3-201ENST00000266085 ADAM11O75078 769 aa13.33□□□□□ -0.28
TIMP3-201ENST00000266085 IGHMP01871 453 aa13.33□□□□□ -0.28
TIMP3-201ENST00000266085 COX5BP10606 129 aa13.33□□□□□ -0.28
TIMP3-201ENST00000266085 PPP1CCP36873 323 aaKnown RBP13.33□□□□□ -0.28
TIMP3-201ENST00000266085 ZFP36L1Q07352 338 aaKnown RBP13.33□□□□□ -0.28
TIMP3-201ENST00000266085 FNDC7Q5VTL7 733 aa13.33□□□□□ -0.28
TIMP3-201ENST00000266085 CLEC9AQ6UXN8 241 aa13.33□□□□□ -0.28
TIMP3-201ENST00000266085 ZNF826PQ6ZT77 177 aa13.33□□□□□ -0.28
TIMP3-201ENST00000266085 INSIG2Q9Y5U4 225 aa13.33□□□□□ -0.28
TIMP3-201ENST00000266085 OR2V2Q96R30 315 aa13.33□□□□□ -0.28
TIMP3-201ENST00000266085 DBX1A6NMT0 343 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 ZIC3O60481 467 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 OR4A8P0C604 315 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 C4orf17Q53FE4 359 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 C10orf128Q5T292 105 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 HARBI1Q96MB7 349 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 WNT5BQ9H1J7 359 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 SH2D2AQ9NP31 389 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 G6PC2Q9NQR9 355 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 MUC6Q6W4X9 2439 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 A0A1B0GU03 582 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 ATXN7O15265 892 aaPredicted RBP13.32□□□□□ -0.28
TIMP3-201ENST00000266085 HLA-GP17693 338 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 ZNF561Q8N587 486 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 OR4F17Q8NGA8 305 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 TMEM171Q8WVE6 324 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 PRDM14Q9GZV8 571 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 C1RLQ9NZP8 487 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 CREBBPQ92793 2442 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 SYNGR1O43759 233 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 SUCLG1P53597 346 aaKnown RBP13.32□□□□□ -0.28
TIMP3-201ENST00000266085 DEFA6Q01524 100 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 COL10A1Q03692 680 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 FLYWCH2Q96CP2 140 aaKnown RBP13.32□□□□□ -0.28
TIMP3-201ENST00000266085 ATP5SQ99766 215 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 GHITMQ9H3K2 345 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 A0A0G2JMM0 328 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 A0A1W2PPB8 328 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 A0A1W2PRS3 328 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 KIR3DP1A8MWS1 328 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 H0Y8G0 127 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 OR5I1Q13606 314 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 LGALSLQ3ZCW2 172 aaPredicted RBP13.32□□□□□ -0.28
TIMP3-201ENST00000266085 ITLN1Q8WWA0 313 aa13.32□□□□□ -0.28
TIMP3-201ENST00000266085 DIRC2Q96SL1 478 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms