RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 HIST1H2BDP58876 126 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 HIST1H2BCP62807 126 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 HIST2H2BEQ16778 126 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.34□□□□□ -0.11
SQLE-201ENST00000265896 HIST1H2BHQ93079 126 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 SNX22Q96L94 193 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 HIST1H2BNQ99877 126 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 HIST1H2BMQ99879 126 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 GALR2O43603 387 aaPredicted RBP14.33□□□□□ -0.12
SQLE-201ENST00000265896 SOX15O60248 233 aa14.33□□□□□ -0.12
SQLE-201ENST00000265896 PITX3O75364 302 aa14.33□□□□□ -0.12
SQLE-201ENST00000265896 CDS2O95674 445 aa14.33□□□□□ -0.12
SQLE-201ENST00000265896 UCP2P55851 309 aa14.33□□□□□ -0.12
SQLE-201ENST00000265896 EXT1Q16394 746 aa14.33□□□□□ -0.12
SQLE-201ENST00000265896 INTS12Q96CB8 462 aaKnown RBP14.33□□□□□ -0.12
SQLE-201ENST00000265896 C10orf35Q96D05 121 aa14.33□□□□□ -0.12
SQLE-201ENST00000265896 OR51M1Q9H341 326 aa14.33□□□□□ -0.12
SQLE-201ENST00000265896 ADGRG4Q8IZF6 3080 aa14.33□□□□□ -0.12
SQLE-201ENST00000265896 OR8B8Q15620 311 aa14.33□□□□□ -0.12
SQLE-201ENST00000265896 NMSQ5H8A3 153 aa14.33□□□□□ -0.12
SQLE-201ENST00000265896 PSMF1Q92530 271 aa14.33□□□□□ -0.12
SQLE-201ENST00000265896 LOC102723996A0A087X1L8 192 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 CEBPZOSA8MTT3 80 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 IGHV2-70P01814 119 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 RAB5CP51148 216 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 RAB1AP62820 205 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 ZNF295-AS1Q8N0V1 137 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 CLDND2Q8NHS1 167 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 S100PBPQ96BU1 408 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 VDAC1P21796 283 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 S100A2P29034 98 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 SRD5A2P31213 254 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 S100A12P80511 92 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 ASCL4Q6XD76 172 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 TIPARPQ7Z3E1 657 aaKnown RBP14.32□□□□□ -0.12
SQLE-201ENST00000265896 WDR5BQ86VZ2 330 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 ZNF808Q8N4W9 903 aaPredicted RBP14.32□□□□□ -0.12
SQLE-201ENST00000265896 GATAD1Q8WUU5 269 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 FRZBQ92765 325 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 WFIKKN1Q96NZ8 548 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 SLC25A31Q9H0C2 315 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 C11orf1Q9H5F2 150 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 LRFN1Q9P244 771 aa14.32□□□□□ -0.12
SQLE-201ENST00000265896 PGA5P0DJD9 388 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 FGF5P12034 268 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 CD200P41217 278 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 MAGEA5P43359 124 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 ALKBH2Q6NS38 261 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 PPP1R32Q7Z5V6 425 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 ZNF610Q8N9Z0 462 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 OR14J1Q9UGF5 321 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 GJE1A6NN92 205 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 SLC34A2O95436 690 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 RTP5Q14D33 572 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 TMPRSS7Q7RTY8 843 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 MKXQ8IYA7 352 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 COMMD1Q8N668 190 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 OR10J5Q8NHC4 309 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 THOC3Q96J01 351 aaKnown RBP14.31□□□□□ -0.12
SQLE-201ENST00000265896 SH2D2AQ9NP31 389 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 IGHV3-13P01766 116 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 IGHV3-7P01780 117 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 LMO1P25800 156 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 CYB561P49447 251 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 ERVS71-1P61550 626 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 ID3Q02535 119 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 ZNF726P1Q15940 193 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 STX12Q86Y82 276 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 RPUSD4Q96CM3 377 aaKnown RBP14.31□□□□□ -0.12
SQLE-201ENST00000265896 TMEM56Q96MV1 263 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 KIAA1456Q9P272 454 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 TMEM56-RWDD3S4R434 201 aa14.31□□□□□ -0.12
SQLE-201ENST00000265896 BDP1A6H8Y1 2624 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 TRAV24A0A0B4J272 114 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 UBE2L5PA0A1B0GUS4 154 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 IFNL4K9M1U5 179 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 IGKV1-39P01597 117 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 IGKV1D-39P04432 117 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 TRGC1P0CF51 173 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 FKBP2P26885 142 aaKnown RBP14.3□□□□□ -0.12
SQLE-201ENST00000265896 ZNF787Q6DD87 383 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 PCSK4Q6UW60 755 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 LILRB2Q8N423 598 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 CCDC54Q8NEL0 328 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 ABHD5Q8WTS1 349 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 TVP23CQ96ET8 276 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 HIST1H2AAQ96QV6 131 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 TUBA4BQ9H853 241 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 F2RP25116 425 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 STARD6P59095 220 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 LTC4SQ16873 150 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 TPRX1Q8N7U7 411 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 YPEL4Q96NS1 127 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 SPIN2AQ99865 258 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 SPIN2BQ9BPZ2 258 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 PCED1AQ9H1Q7 454 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 WDR54Q9H977 334 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 UFSP2Q9NUQ7 469 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 GAR1Q9NY12 217 aaKnown RBP14.3□□□□□ -0.12
SQLE-201ENST00000265896 ZMAT5Q9UDW3 170 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms