RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 IFNL4K9M1U5 179 aa9.4□□□□□ -0.9
MSH3-201ENST00000265081 TXNL1O43396 289 aa9.4□□□□□ -0.9
MSH3-201ENST00000265081 SCGB1D2O95969 90 aa9.4□□□□□ -0.9
MSH3-201ENST00000265081 FOLR2P14207 255 aa9.4□□□□□ -0.9
MSH3-201ENST00000265081 Q6ZR03 302 aa9.4□□□□□ -0.9
MSH3-201ENST00000265081 ZBTB34Q8NCN2 500 aa9.4□□□□□ -0.9
MSH3-201ENST00000265081 SLC25A31Q9H0C2 315 aa9.4□□□□□ -0.9
MSH3-201ENST00000265081 SH3BGRL3Q9H299 93 aa9.4□□□□□ -0.9
MSH3-201ENST00000265081 UBE2J1Q9Y385 318 aaPredicted RBP9.4□□□□□ -0.9
MSH3-201ENST00000265081 HSD17B6O14756 317 aa9.4□□□□□ -0.9
MSH3-201ENST00000265081 OR8U8P0C7N1 319 aa9.4□□□□□ -0.9
MSH3-201ENST00000265081 ZNF266Q14584 549 aa9.4□□□□□ -0.9
MSH3-201ENST00000265081 RTP5Q14D33 572 aa9.4□□□□□ -0.9
MSH3-201ENST00000265081 CXorf66Q5JRM2 361 aaPredicted RBP9.4□□□□□ -0.9
MSH3-201ENST00000265081 VASH2Q86V25 355 aa9.4□□□□□ -0.9
MSH3-201ENST00000265081 FOXRED2Q8IWF2 684 aa9.4□□□□□ -0.9
MSH3-201ENST00000265081 DEFB124Q8NES8 71 aa9.4□□□□□ -0.9
MSH3-201ENST00000265081 FRYQ5TBA9 3013 aa9.4□□□□□ -0.91
MSH3-201ENST00000265081 H0YL77 283 aa9.4□□□□□ -0.91
MSH3-201ENST00000265081 HS3ST1O14792 307 aa9.4□□□□□ -0.91
MSH3-201ENST00000265081 TM4SF5O14894 197 aa9.4□□□□□ -0.91
MSH3-201ENST00000265081 PPIHO43447 177 aaKnown RBP9.4□□□□□ -0.91
MSH3-201ENST00000265081 CFHR2P36980 270 aa9.4□□□□□ -0.91
MSH3-201ENST00000265081 NPBWR1P48145 328 aa9.4□□□□□ -0.91
MSH3-201ENST00000265081 SPATA46Q5T0L3 261 aa9.4□□□□□ -0.91
MSH3-201ENST00000265081 SARAFQ96BY9 339 aa9.4□□□□□ -0.91
MSH3-201ENST00000265081 GPR146Q96CH1 333 aa9.4□□□□□ -0.91
MSH3-201ENST00000265081 STARD4Q96DR4 205 aa9.4□□□□□ -0.91
MSH3-201ENST00000265081 C5orf30Q96GV9 206 aa9.4□□□□□ -0.91
MSH3-201ENST00000265081 TRIB1Q96RU8 372 aa9.4□□□□□ -0.91
MSH3-201ENST00000265081 CXXC4Q9H2H0 198 aa9.4□□□□□ -0.91
MSH3-201ENST00000265081 HRH4Q9H3N8 390 aa9.4□□□□□ -0.91
MSH3-201ENST00000265081 CDH20Q9HBT6 801 aa9.4□□□□□ -0.91
MSH3-201ENST00000265081 C19orf12Q9NSK7 152 aa9.4□□□□□ -0.91
MSH3-201ENST00000265081 LUZP4Q9P127 313 aa9.4□□□□□ -0.91
MSH3-201ENST00000265081 UMAD1C9J7I0 102 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 SH2D1BO14796 132 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 UBE2NP61088 152 aaKnown RBP9.39□□□□□ -0.91
MSH3-201ENST00000265081 DEFA5Q01523 94 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 VWA1Q6PCB0 445 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 MEX3BQ6ZN04 569 aaKnown RBP9.39□□□□□ -0.91
MSH3-201ENST00000265081 MMP24Q9Y5R2 645 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 WSB1Q9Y6I7 421 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 F8W036 122 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 IGKV1-5P01602 117 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 EIF2S3P41091 472 aaKnown RBP9.39□□□□□ -0.91
MSH3-201ENST00000265081 POLR2GP62487 172 aaKnown RBP eCLIP9.39□□□□□ -0.91
MSH3-201ENST00000265081 IGFBP7Q16270 282 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 AARDQ4LEZ3 155 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 FAM122CQ6P4D5 195 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 SPSB3Q6PJ21 355 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 ACP7Q6ZNF0 438 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 BOLLQ8N9W6 283 aaKnown RBP9.39□□□□□ -0.91
MSH3-201ENST00000265081 TAAR6Q96RI8 345 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 FAM96BQ9Y3D0 163 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 ZNF407Q9C0G0 2248 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 HAND1O96004 215 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 MAS1LP35410 378 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 P2RY6Q15077 328 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 P4HA3Q7Z4N8 544 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 FAM90A1Q86YD7 464 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 RDH5Q92781 318 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 SLC25A15Q9Y619 301 aa9.39□□□□□ -0.91
MSH3-201ENST00000265081 TRAV1-1A0A0B4J248 108 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 IGHV1-18A0A0C4DH31 117 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 FAM24AA6NFZ4 105 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 FAM90A26D6RGX4 464 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 TSPAN4O14817 238 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 LYZL6O75951 148 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 ID4P47928 161 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 CLEC9AQ6UXN8 241 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 WDR82Q6UXN9 313 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 LFNGQ8NES3 379 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 OR1J1Q8NGS3 322 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 TUBA4BQ9H853 241 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 SSUH2Q9Y2M2 353 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 PSPNO60542 156 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 CECR9P0C854 216 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 PSG2P11465 335 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 PVALBP20472 110 aaPredicted RBP9.38□□□□□ -0.91
MSH3-201ENST00000265081 AKR1C2P52895 323 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 AKR1C1Q04828 323 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 Q6ZRM9 215 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 ZNF645Q8N7E2 425 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 RAB40CQ96S21 281 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 SMIM3Q9BZL3 60 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 BCL2L14Q9BZR8 327 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 ERRFI1Q9UJM3 462 aaPredicted RBP9.38□□□□□ -0.91
MSH3-201ENST00000265081 KPTNQ9Y664 436 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 ASPMQ8IZT6 3477 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 ZNF318Q5VUA4 2279 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 ZDBF2Q9HCK1 2354 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 IGHV2OR16-5A0A0B4J2B6 119 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 C3orf80F5H4A9 247 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 HSPB6O14558 160 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 EPHA1P21709 976 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 FOXF2Q12947 444 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 MIDNQ504T8 468 aa9.38□□□□□ -0.91
MSH3-201ENST00000265081 SNIP1Q8TAD8 396 aaKnown RBP9.38□□□□□ -0.91
MSH3-201ENST00000265081 COQ2Q96H96 371 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms