RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 ORAOV1Q8WV07 137 aa11.3□□□□□ -0.6
NUP54-201ENST00000264883 RNF138Q8WVD3 245 aa11.3□□□□□ -0.6
NUP54-201ENST00000264883 RPUSD4Q96CM3 377 aaKnown RBP11.3□□□□□ -0.6
NUP54-201ENST00000264883 ALKBH3Q96Q83 286 aaPredicted RBP11.3□□□□□ -0.6
NUP54-201ENST00000264883 GSX1Q9H4S2 264 aaPredicted RBP11.3□□□□□ -0.6
NUP54-201ENST00000264883 VSIRQ9H7M9 311 aa11.3□□□□□ -0.6
NUP54-201ENST00000264883 PNRC2Q9NPJ4 139 aaKnown RBP11.3□□□□□ -0.6
NUP54-201ENST00000264883 TMEM9BQ9NQ34 198 aa11.3□□□□□ -0.6
NUP54-201ENST00000264883 SIT1Q9Y3P8 196 aa11.3□□□□□ -0.6
NUP54-201ENST00000264883 TRAPPC1Q9Y5R8 145 aa11.3□□□□□ -0.6
NUP54-201ENST00000264883 TDRD6O60522 2096 aaKnown RBP11.29□□□□□ -0.6
NUP54-201ENST00000264883 A0A0U1RQV5 110 aa11.29□□□□□ -0.6
NUP54-201ENST00000264883 C3orf85A0A1B0GTC6 90 aa11.29□□□□□ -0.6
NUP54-201ENST00000264883 FKBP2P26885 142 aaKnown RBP11.29□□□□□ -0.6
NUP54-201ENST00000264883 GCH1P30793 250 aa11.29□□□□□ -0.6
NUP54-201ENST00000264883 CXCL12P48061 93 aa11.29□□□□□ -0.6
NUP54-201ENST00000264883 SRPXP78539 464 aa11.29□□□□□ -0.6
NUP54-201ENST00000264883 MMDQ15546 238 aa11.29□□□□□ -0.6
NUP54-201ENST00000264883 RNF151Q2KHN1 245 aa11.29□□□□□ -0.6
NUP54-201ENST00000264883 KCNIP4Q6PIL6 250 aa11.29□□□□□ -0.6
NUP54-201ENST00000264883 CRIP3Q6Q6R5 217 aa11.29□□□□□ -0.6
NUP54-201ENST00000264883 Q6ZSR3 168 aa11.29□□□□□ -0.6
NUP54-201ENST00000264883 MOB3AQ96BX8 217 aa11.29□□□□□ -0.6
NUP54-201ENST00000264883 ABHD14BQ96IU4 210 aa11.29□□□□□ -0.6
NUP54-201ENST00000264883 EMC6Q9BV81 110 aa11.29□□□□□ -0.6
NUP54-201ENST00000264883 RNF150Q9ULK6 438 aa11.29□□□□□ -0.6
NUP54-201ENST00000264883 PPIAL4AQ9Y536 164 aa11.29□□□□□ -0.6
NUP54-201ENST00000264883 VCANP13611 3396 aa11.29□□□□□ -0.6
NUP54-201ENST00000264883 AQP7O14520 342 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 TCN2P20062 427 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 ANOS1P23352 680 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 TMEM41BQ5BJD5 291 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 FAM180AQ6UWF9 173 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 Q6ZWC4 215 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 ZNF695Q8IW36 515 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 RSG1Q9BU20 258 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 MANBALQ9NQG1 85 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 A0A1B0GX78 115 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 ADAM20O43506 726 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 TLX3O43711 291 aaPredicted RBP11.28□□□□□ -0.6
NUP54-201ENST00000264883 ZNF737O75373 536 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 TRAPPC6AO75865 159 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 NXPH3O95157 252 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 OR5G3P0C626 314 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 FCGR2AP12318 317 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 DTYMKP23919 212 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 RPL15P61313 204 aaKnown RBP11.28□□□□□ -0.6
NUP54-201ENST00000264883 ZXDAP98168 799 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 EXT1Q16394 746 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 ATP6V1FQ16864 119 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 STPG4Q8N801 248 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 OR1L6Q8NGR2 347 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 VN1R17PQ8TDU5 208 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 FAM122AQ96E09 287 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 PGAM5Q96HS1 289 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 PLK3Q9H4B4 646 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 NCOR1P1Q9H4R4 102 aa11.28□□□□□ -0.6
NUP54-201ENST00000264883 IGLV3-32A0A0A0MS00 114 aa11.27□□□□□ -0.6
NUP54-201ENST00000264883 LOC102725191A0A1B0GVB3 256 aa11.27□□□□□ -0.6
NUP54-201ENST00000264883 CHST1O43916 411 aa11.27□□□□□ -0.6
NUP54-201ENST00000264883 DHRS3O75911 302 aa11.27□□□□□ -0.6
NUP54-201ENST00000264883 EFNA3P52797 238 aa11.27□□□□□ -0.6
NUP54-201ENST00000264883 TPPP2P59282 170 aa11.27□□□□□ -0.6
NUP54-201ENST00000264883 MYBPHQ13203 477 aa11.27□□□□□ -0.6
NUP54-201ENST00000264883 HIST3H3Q16695 136 aa11.27□□□□□ -0.6
NUP54-201ENST00000264883 CALHM1Q8IU99 346 aa11.27□□□□□ -0.6
NUP54-201ENST00000264883 SCGB1C1Q8TD33 95 aa11.27□□□□□ -0.6
NUP54-201ENST00000264883 OXGR1Q96P68 337 aa11.27□□□□□ -0.6
NUP54-201ENST00000264883 ALKBH7Q9BT30 221 aaPredicted RBP11.27□□□□□ -0.6
NUP54-201ENST00000264883 TMEM222Q9H0R3 208 aa11.27□□□□□ -0.6
NUP54-201ENST00000264883 UBE2J1Q9Y385 318 aaPredicted RBP11.27□□□□□ -0.6
NUP54-201ENST00000264883 SPAG17Q6Q759 2223 aa11.27□□□□□ -0.61
NUP54-201ENST00000264883 A0A1W2PN81 502 aa11.27□□□□□ -0.61
NUP54-201ENST00000264883 MPPED1O15442 326 aa11.27□□□□□ -0.61
NUP54-201ENST00000264883 TRAF3IP2O43734 574 aaPredicted RBP11.27□□□□□ -0.61
NUP54-201ENST00000264883 IL3RAP26951 378 aa11.27□□□□□ -0.61
NUP54-201ENST00000264883 CHRNA7P36544 502 aa11.27□□□□□ -0.61
NUP54-201ENST00000264883 HERV-K104P61576 105 aa11.27□□□□□ -0.61
NUP54-201ENST00000264883 PAFAH1B2P68402 229 aa11.27□□□□□ -0.61
NUP54-201ENST00000264883 LCN2P80188 198 aa11.27□□□□□ -0.61
NUP54-201ENST00000264883 MEF2BQ02080 365 aaPredicted RBP11.27□□□□□ -0.61
NUP54-201ENST00000264883 LMX1AQ8TE12 382 aa11.27□□□□□ -0.61
NUP54-201ENST00000264883 LIN37Q96GY3 246 aaPredicted RBP11.27□□□□□ -0.61
NUP54-201ENST00000264883 ZNF286AQ9HBT8 521 aa11.27□□□□□ -0.61
NUP54-201ENST00000264883 THADAQ6YHU6 1953 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 A0A0U1RQK1 487 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 ZNF320A2RRD8 509 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 CDKN1AP38936 164 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 UBE2V1Q13404 147 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 LYG1Q8N1E2 194 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 OR1L3Q8NH93 324 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 WDYHV1Q96HA8 205 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 Q96M66 194 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 PARLQ9H300 379 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 VDAC3Q9Y277 283 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 RNF115Q9Y4L5 304 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 PXMP4Q9Y6I8 212 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 TRAV39A0A0B4J263 110 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 H3BML4 177 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 PDGFBP01127 241 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms