RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 RND1Q92730 232 aa15.74■□□□□ 0.11
COL5A3-201ENST00000264828 LHX9Q9NQ69 397 aa15.74■□□□□ 0.11
COL5A3-201ENST00000264828 OR2W1Q9Y3N9 320 aa15.74■□□□□ 0.11
COL5A3-201ENST00000264828 ISLRO14498 428 aa15.74■□□□□ 0.11
COL5A3-201ENST00000264828 CD3EP07766 207 aa15.74■□□□□ 0.11
COL5A3-201ENST00000264828 COMPP49747 757 aaPredicted RBP15.74■□□□□ 0.11
COL5A3-201ENST00000264828 ZPLD1Q8TCW7 415 aa15.74■□□□□ 0.11
COL5A3-201ENST00000264828 TMEM91Q6ZNR0 172 aa15.73■□□□□ 0.11
COL5A3-201ENST00000264828 OR8I2Q8N0Y5 310 aa15.73■□□□□ 0.11
COL5A3-201ENST00000264828 RAB1CQ92928 201 aa15.73■□□□□ 0.11
COL5A3-201ENST00000264828 ZNF488Q96MN9 340 aa15.73■□□□□ 0.11
COL5A3-201ENST00000264828 TMUB1Q9BVT8 246 aa15.73■□□□□ 0.11
COL5A3-201ENST00000264828 ZNHIT1O43257 154 aa15.73■□□□□ 0.11
COL5A3-201ENST00000264828 PGA4P0DJD7 388 aa15.73■□□□□ 0.11
COL5A3-201ENST00000264828 PGA5P0DJD9 388 aa15.73■□□□□ 0.11
COL5A3-201ENST00000264828 LSM6P62312 80 aaKnown RBP15.73■□□□□ 0.11
COL5A3-201ENST00000264828 GBGT1Q8N5D6 347 aa15.73■□□□□ 0.11
COL5A3-201ENST00000264828 OR4C45A6NMZ5 311 aa15.73■□□□□ 0.11
COL5A3-201ENST00000264828 NXPH1P58417 271 aa15.73■□□□□ 0.11
COL5A3-201ENST00000264828 Q8WTZ3 238 aa15.73■□□□□ 0.11
COL5A3-201ENST00000264828 SNRNP40Q96DI7 357 aaKnown RBP15.73■□□□□ 0.11
COL5A3-201ENST00000264828 CDX4O14627 284 aaPredicted RBP15.73■□□□□ 0.11
COL5A3-201ENST00000264828 C1QAP02745 245 aa15.73■□□□□ 0.11
COL5A3-201ENST00000264828 UBE2V2Q15819 145 aa15.73■□□□□ 0.11
COL5A3-201ENST00000264828 EAF1Q96JC9 268 aaPredicted RBP15.73■□□□□ 0.11
COL5A3-201ENST00000264828 TP53RKQ96S44 253 aa15.73■□□□□ 0.11
COL5A3-201ENST00000264828 SAP30LQ9HAJ7 183 aa15.73■□□□□ 0.11
COL5A3-201ENST00000264828 EPHA8P29322 1005 aaPredicted RBP15.73■□□□□ 0.11
COL5A3-201ENST00000264828 ECSCRQ19T08 205 aa15.73■□□□□ 0.11
COL5A3-201ENST00000264828 FAM74A3Q4VXF1 159 aa15.73■□□□□ 0.11
COL5A3-201ENST00000264828 PITPNC1Q9UKF7 332 aa15.73■□□□□ 0.11
COL5A3-201ENST00000264828 GPR35Q9HC97 309 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 RABAC1Q9UI14 185 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 KLHDC2Q9Y2U9 406 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 OR51B2Q9Y5P1 312 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 RPL36A-HNRNPH2H7BZ11 118 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 TWIST1Q15672 202 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 RAB24Q969Q5 203 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 AKIRIN1Q9H9L7 192 aaPredicted RBP15.72■□□□□ 0.11
COL5A3-201ENST00000264828 BGLAPP02818 100 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 EIF3IQ13347 325 aaKnown RBP15.72■□□□□ 0.11
COL5A3-201ENST00000264828 TEPPQ6URK8 271 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 SLC25A40Q8TBP6 338 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 A0A1W2PQD3 144 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 H7C2G1 150 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 STAG3L2P0CL84 134 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 CCL3P10147 92 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 RUNX1Q01196 453 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 RFLNBQ8N5W9 214 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 RNF122Q9H9V4 155 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 PRNDQ9UKY0 176 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 AUP1Q9Y679 476 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 PITX3O75364 302 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 INSIG2Q9Y5U4 225 aa15.72■□□□□ 0.11
COL5A3-201ENST00000264828 HIST1H1BP16401 226 aaKnown RBP15.71■□□□□ 0.11
COL5A3-201ENST00000264828 CLPPQ16740 277 aaPredicted RBP15.71■□□□□ 0.11
COL5A3-201ENST00000264828 ZNF519Q8TB69 540 aa15.71■□□□□ 0.11
COL5A3-201ENST00000264828 RNF7Q9UBF6 113 aa15.71■□□□□ 0.11
COL5A3-201ENST00000264828 PPP1CCP36873 323 aaKnown RBP15.71■□□□□ 0.11
COL5A3-201ENST00000264828 RHBDD2Q6NTF9 364 aa15.71■□□□□ 0.11
COL5A3-201ENST00000264828 WDFY1Q8IWB7 410 aa15.71■□□□□ 0.11
COL5A3-201ENST00000264828 MRPS18BQ9Y676 258 aaKnown RBP15.71■□□□□ 0.11
COL5A3-201ENST00000264828 WNK3Q9BYP7 1800 aa15.71■□□□□ 0.11
COL5A3-201ENST00000264828 A0A1B0GU03 582 aa15.71■□□□□ 0.11
COL5A3-201ENST00000264828 M0R296 226 aa15.71■□□□□ 0.11
COL5A3-201ENST00000264828 HIST1H1EP10412 219 aaKnown RBP15.71■□□□□ 0.11
COL5A3-201ENST00000264828 CXCL2P19875 107 aa15.71■□□□□ 0.11
COL5A3-201ENST00000264828 TMEM211Q6ICI0 200 aa15.71■□□□□ 0.11
COL5A3-201ENST00000264828 OR4A47Q6IF82 309 aa15.71■□□□□ 0.11
COL5A3-201ENST00000264828 OR1N2Q8NGR9 330 aa15.71■□□□□ 0.11
COL5A3-201ENST00000264828 ZNF665Q9H7R5 613 aa15.71■□□□□ 0.11
COL5A3-201ENST00000264828 MBD1Q9UIS9 605 aaPredicted RBP15.71■□□□□ 0.11
COL5A3-201ENST00000264828 TNFSF18Q9UNG2 199 aa15.71■□□□□ 0.11
COL5A3-201ENST00000264828 EML2O95834 649 aa15.71■□□□□ 0.1
COL5A3-201ENST00000264828 CA2P00918 260 aa15.71■□□□□ 0.1
COL5A3-201ENST00000264828 IRF3Q14653 427 aa15.71■□□□□ 0.1
COL5A3-201ENST00000264828 FAM216AQ8WUB2 273 aa15.71■□□□□ 0.1
COL5A3-201ENST00000264828 CTXND1A0A1B0GTU2 59 aa15.7■□□□□ 0.1
COL5A3-201ENST00000264828 DCAF12L2Q5VW00 463 aa15.7■□□□□ 0.1
COL5A3-201ENST00000264828 PET117Q6UWS5 81 aa15.7■□□□□ 0.1
COL5A3-201ENST00000264828 COL10A1Q03692 680 aa15.7■□□□□ 0.1
COL5A3-201ENST00000264828 CYB561D1Q8N8Q1 229 aa15.7■□□□□ 0.1
COL5A3-201ENST00000264828 SF3B5Q9BWJ5 86 aaKnown RBP15.7■□□□□ 0.1
COL5A3-201ENST00000264828 ST6GALNAC2Q9UJ37 374 aa15.7■□□□□ 0.1
COL5A3-201ENST00000264828 SYNGR1O43759 233 aa15.7■□□□□ 0.1
COL5A3-201ENST00000264828 COX19Q49B96 90 aa15.7■□□□□ 0.1
COL5A3-201ENST00000264828 PTPMT1Q8WUK0 201 aaPredicted RBP15.7■□□□□ 0.1
COL5A3-201ENST00000264828 C10orf35Q96D05 121 aa15.7■□□□□ 0.1
COL5A3-201ENST00000264828 GPA33Q99795 319 aa15.7■□□□□ 0.1
COL5A3-201ENST00000264828 BRS3P32247 399 aa15.7■□□□□ 0.1
COL5A3-201ENST00000264828 RNFT1Q5M7Z0 435 aa15.7■□□□□ 0.1
COL5A3-201ENST00000264828 SPANXN1Q5VSR9 72 aa15.7■□□□□ 0.1
COL5A3-201ENST00000264828 C1QCP02747 245 aa15.7■□□□□ 0.1
COL5A3-201ENST00000264828 CCL4P13236 92 aa15.7■□□□□ 0.1
COL5A3-201ENST00000264828 MUC1P15941 1255 aaPredicted RBP15.7■□□□□ 0.1
COL5A3-201ENST00000264828 PGLYRP3Q96LB9 341 aa15.7■□□□□ 0.1
COL5A3-201ENST00000264828 LY75O60449 1722 aa15.69■□□□□ 0.1
COL5A3-201ENST00000264828 KLF7O75840 302 aaPredicted RBP15.69■□□□□ 0.1
COL5A3-201ENST00000264828 VSIG10L2P0DP72 767 aa15.69■□□□□ 0.1
COL5A3-201ENST00000264828 GUCA2BQ16661 112 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms