RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 NECAP1Q8NC96 275 aa10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 IMMP2LQ96T52 175 aa10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 MANBALQ9NQG1 85 aa10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 FUT9Q9Y231 359 aa10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 LAMA2P24043 3122 aaKnown RBP10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 MYO7BQ6PIF6 2116 aa10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 OR6C6A6NF89 314 aa10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 TMEM210A6NLX4 147 aa10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 CD300LBA8K4G0 201 aa10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 H3BP45 60 aa10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 MBP02144 154 aa10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 CD55P08174 381 aa10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 CNN1P51911 297 aaKnown RBP10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 PDCD1Q15116 288 aa10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 DCAF10Q5QP82 559 aa10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 SAXO1Q8IYX7 474 aa10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 C17orf78Q8N4C9 275 aa10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 PIGCQ92535 297 aa10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 SPACA9Q96E40 222 aaPredicted RBP10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 WDR61Q9GZS3 305 aaKnown RBP10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 VSIRQ9H7M9 311 aa10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 ATP23Q9Y6H3 246 aa10.62□□□□□ -0.71
CHMP2B-201ENST00000263780 hCG_38984A0A1B0GV85 526 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 A0A1W2PPQ1 181 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 SCTP09683 121 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 GZMHP20718 246 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 G0S2P27469 103 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 TDGF1P3P51864 188 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 PCBD1P61457 104 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 ZNF92Q03936 586 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 GAGE1Q13065 139 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 ZNF774Q6NX45 483 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 C7orf61Q8IZ16 206 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 ZNF611Q8N823 705 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 ATG101Q9BSB4 218 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 CD207Q9UJ71 328 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 IGKV1D-13A0A0B4J2D9 117 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 KIR2DL5BA0A0G2JN68 375 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 KIR2DL5BA0A0G2JPC4 375 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 KIAA1324LA8MWY0 1029 aaPredicted RBP10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 LINC01565O15544 149 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 OR4A8P0C604 315 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 IGKV1-13P0DP09 117 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 ZNF25P17030 456 aaPredicted RBP10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 CD27P26842 260 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 HERPUD1Q15011 391 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 RSPO4Q2I0M5 234 aaPredicted RBP10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 ATG2AQ2TAZ0 1938 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 KRTAP27-1Q3LI81 207 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 KIR2DL5AQ8N109 375 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 EXPH5Q8NEV8 1989 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 MRPL30Q8TCC3 161 aaKnown RBP10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 RPUSD4Q96CM3 377 aaKnown RBP10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 C19orf25Q9UFG5 118 aaPredicted RBP10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 SHANK1Q9Y566 2161 aa10.61□□□□□ -0.71
CHMP2B-201ENST00000263780 NCOA6Q14686 2063 aaPredicted RBP10.6□□□□□ -0.71
CHMP2B-201ENST00000263780 LRRC3CA6NJW4 275 aa10.6□□□□□ -0.71
CHMP2B-201ENST00000263780 CDCP2Q5VXM1 449 aa10.6□□□□□ -0.71
CHMP2B-201ENST00000263780 TAF15Q92804 592 aaKnown RBP eCLIP10.6□□□□□ -0.71
CHMP2B-201ENST00000263780 SF3B5Q9BWJ5 86 aaKnown RBP10.6□□□□□ -0.71
CHMP2B-201ENST00000263780 DEFB126Q9BYW3 111 aa10.6□□□□□ -0.71
CHMP2B-201ENST00000263780 NAGKQ9UJ70 344 aa10.6□□□□□ -0.71
CHMP2B-201ENST00000263780 RALGAPA1Q6GYQ0 2036 aa10.6□□□□□ -0.71
CHMP2B-201ENST00000263780 A0A1W2PR77 199 aa10.6□□□□□ -0.71
CHMP2B-201ENST00000263780 MARCH11A6NNE9 402 aa10.6□□□□□ -0.71
CHMP2B-201ENST00000263780 RPLP1P05386 114 aaKnown RBP10.6□□□□□ -0.71
CHMP2B-201ENST00000263780 STRADBQ9C0K7 418 aa10.6□□□□□ -0.71
CHMP2B-201ENST00000263780 PARLQ9H300 379 aa10.6□□□□□ -0.71
CHMP2B-201ENST00000263780 CTXND1A0A1B0GTU2 59 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 GYPAP02724 150 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 CD99P14209 185 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 FGF12P61328 243 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 CFHR1Q03591 330 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 ATP6V1FQ16864 119 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 TEX38Q6PEX7 206 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 FAM180AQ6UWF9 173 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 SSX7Q7RTT5 188 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 ZNF295-AS1Q8N0V1 137 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 CPT1CQ8TCG5 803 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 NEK7Q8TDX7 302 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 RASL10BQ96S79 203 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 CBLN4Q9NTU7 201 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 GOLT1BQ9Y3E0 138 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 OR2W1Q9Y3N9 320 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 LAMA3Q16787 3333 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 GJE1A6NN92 205 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 ZNF573Q86YE8 665 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 OR4C12Q96R67 309 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 TMEM38BQ9NVV0 291 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 CACNG5Q9UF02 275 aa10.59□□□□□ -0.71
CHMP2B-201ENST00000263780 CHD7Q9P2D1 2997 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 KNL1Q8NG31 2342 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 FAM90A26D6RGX4 464 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 TNFSF12O43508 249 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 DNPH1O43598 174 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 LINC00614P0C842 121 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 IAPPP10997 89 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 ZNF32P17041 273 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 VEGFBP49765 207 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 ELLP55199 621 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms