RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 OR1A1Q9P1Q5 309 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 EDARQ9UNE0 448 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 NOTCH2Q04721 2471 aa8.02□□□□□ -1.12
SNRNP40-201ENST00000263694 TRGV10A0A0A0MS01 117 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 FUOMA2VDF0 154 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 FAM172BPA6NC97 362 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 FAM157AC9JC47 383 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 NDUFS8O00217 210 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 OR5H8P0DN80 308 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 TAS2R46P59540 309 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 DEFA1P59665 94 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 DEFA3P59666 94 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 TSPAN5P62079 268 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 GNMTQ14749 295 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 SRSF7Q16629 238 aaKnown RBP eCLIP8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 SCGB2B2Q4G0G5 96 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 Q6ZS49 121 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 MOB1BQ7L9L4 216 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 OVCH2Q7RTZ1 564 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 KRTAP1-3Q8IUG1 177 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 ZNF565Q8N9K5 539 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 OR10V1Q8NGI7 309 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 CREB3L1Q96BA8 519 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 MBD6Q96DN6 1003 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 PARP12Q9H0J9 701 aaKnown RBP8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 MMP28Q9H239 520 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 LPAR2Q9HBW0 351 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 NECAP2Q9NVZ3 263 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 CALYQ9NYX4 217 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 OR6C3Q9NZP0 311 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 SLC23A1Q9UHI7 598 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 ZNF107Q9UII5 783 aaPredicted RBP8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 BAHCC1Q9P281 2608 aa8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 FLNBO75369 2602 aaKnown RBP8.02□□□□□ -1.13
SNRNP40-201ENST00000263694 LOC105371242A0A075B767 164 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 KIR2DS1A0A191URI9 304 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 hADV38S2A0JD32 116 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 FAM181BA6NEQ2 426 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 CENPXA8MT69 81 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 KIAA1324LA8MWY0 1029 aaPredicted RBP8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 IFNA6P05013 189 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 GZMHP20718 246 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 FCGR2CP31995 323 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 KIR2DS4P43632 304 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 DSCR9P59020 149 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 MEF2CQ06413 473 aaPredicted RBP8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 KIR2DS1Q14954 304 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 RGS21Q2M5E4 152 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 CR1LQ2VPA4 569 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 ESCO2Q56NI9 601 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 C6orf183Q5T699 404 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 PRAMEF5Q5TYX0 476 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 MZT2BQ6NZ67 158 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 LRRC75A-AS1Q8N1F1 130 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 OR4A4PQ8NGN8 299 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 CORO2AQ92828 525 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 LEAP2Q969E1 77 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 MRGPRFQ96AM1 343 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 ZNF2Q9BSG1 426 aaPredicted RBP8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 NCOR1P1Q9H4R4 102 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 RPUSD1Q9UJJ7 312 aaKnown RBP8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 FLVCR2Q9UPI3 526 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 LINC00312Q9Y6C7 94 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 CR1P17927 2039 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 A0A096LNT2 108 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 TRBV6-7A0A0A0MS04 114 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 PPIAL4CA0A0B4J2A2 164 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 KBTBD11-OT1A0A1B0GTJ5 212 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 FAM240BA0A1B0GVZ2 78 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 OR5H14A6NHG9 310 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 DISC1C4P0D8 188 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 SPINT2O43291 252 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 PPIAL4GP0DN37 164 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 TBPP20226 339 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 AADACP22760 399 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 NFYBP25208 207 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 SLC6A1P30531 599 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 FAUP35544 74 aaKnown RBP8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 PPP1CCP36873 323 aaKnown RBP8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 CEACAM6P40199 344 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 NPY4RP50391 375 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 DLX6P56179 175 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 FXYD4P59646 89 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 MEF2DQ14814 521 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 PLA1AQ53H76 456 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 ACTBL2Q562R1 376 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 VAX1Q5SQQ9 334 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 ZNF660Q6AZW8 331 aaPredicted RBP8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 IDO2Q6ZQW0 420 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 LDLRAD3Q86YD5 345 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 OR13C8Q8NGS7 320 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 ENKURQ8TC29 256 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 NINJ1Q92982 152 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 GALMQ96C23 342 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 Q96MF0 132 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 ZNF714Q96N38 554 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 C7orf50Q9BRJ6 194 aaKnown RBP8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 GINS4Q9BRT9 223 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 CABLES2Q9BTV7 478 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 OR2S2Q9NQN1 319 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms